Wall clock time and date at job start Tue Mar 31 2020 07:25:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 C 1.52998 * 109.47191 * 2 1 4 4 N 1.46500 * 109.47324 * 179.97438 * 3 2 1 5 5 C 1.46502 * 119.99838 * 270.00468 * 4 3 2 6 6 C 1.34775 * 119.99990 * 90.00352 * 4 3 2 7 7 O 1.21583 * 119.99896 * 359.97438 * 6 4 3 8 8 N 1.34772 * 119.99891 * 180.27714 * 6 4 3 9 9 C 1.39278 * 120.00051 * 175.48496 * 8 6 4 10 10 C 1.39469 * 119.83792 * 34.66138 * 9 8 6 11 11 C 1.36372 * 120.18104 * 179.71864 * 10 9 8 12 12 C 1.40890 * 119.84545 * 0.55726 * 11 10 9 13 13 C 1.41163 * 120.15695 * 179.74153 * 12 11 10 14 14 H 1.07998 * 119.99896 * 34.69485 * 13 12 11 15 15 C 1.39887 * 119.99953 * 214.69026 * 13 12 11 16 16 N 1.30884 * 120.00114 * 355.75296 * 15 13 12 17 17 Si 1.86792 * 119.99892 * 175.74886 * 15 13 12 18 18 H 1.48500 * 109.47213 * 60.00445 * 17 15 13 19 19 H 1.48508 * 109.47140 * 180.02562 * 17 15 13 20 20 H 1.48498 * 109.47402 * 300.00054 * 17 15 13 21 21 C 1.40840 * 119.68579 * 359.71708 * 12 11 10 22 22 C 1.36475 * 119.81786 * 0.02562 * 21 12 11 23 23 Cl 1.73597 * 119.92664 * 179.97438 * 22 21 12 24 24 H 1.09002 * 109.47043 * 299.99608 * 1 2 3 25 25 H 1.08999 * 109.47661 * 59.99802 * 1 2 3 26 26 H 1.09009 * 109.47251 * 179.97438 * 1 2 3 27 27 H 1.09002 * 109.47043 * 240.00392 * 2 1 3 28 28 H 1.08999 * 109.47661 * 120.00198 * 2 1 3 29 29 H 1.09002 * 109.46807 * 60.00248 * 3 2 1 30 30 H 1.08999 * 109.47504 * 300.00629 * 3 2 1 31 31 H 1.09001 * 109.47006 * 269.99365 * 5 4 3 32 32 H 1.08994 * 109.47616 * 30.00131 * 5 4 3 33 33 H 1.09002 * 109.47074 * 150.00030 * 5 4 3 34 34 H 0.96997 * 120.00471 * 355.48588 * 8 6 4 35 35 H 1.08007 * 119.90857 * 359.97438 * 10 9 8 36 36 H 1.07996 * 120.08018 * 180.25290 * 11 10 9 37 37 H 0.97000 * 120.00203 * 179.97438 * 16 15 13 38 38 H 1.07999 * 120.09423 * 180.02562 * 21 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 7 3.5049 1.4425 0.0006 5 6 4.2369 1.4426 1.2697 6 6 4.1793 1.4424 -1.1663 7 8 3.5718 1.4418 -2.2195 8 7 5.5270 1.4368 -1.1657 9 6 6.2236 1.3418 -2.3681 10 6 5.7118 1.9460 -3.5161 11 6 6.3908 1.8622 -4.6958 12 6 7.6067 1.1530 -4.7561 13 6 8.3123 1.0575 -5.9750 14 1 8.3038 1.8840 -6.6700 15 6 9.0225 -0.1078 -6.2825 16 7 9.1020 -1.0764 -5.4058 17 14 9.8574 -0.2814 -7.9444 18 1 10.8579 0.8031 -8.1115 19 1 10.5377 -1.5993 -8.0214 20 1 8.8399 -0.1866 -9.0219 21 6 8.1151 0.5403 -3.5943 22 6 7.4272 0.6370 -2.4196 23 17 8.0509 -0.1177 -0.9861 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3634 -1.0277 -0.0005 27 1 1.8933 -0.5138 -0.8900 28 1 1.8934 -0.5138 0.8899 29 1 1.6766 1.9563 0.8900 30 1 1.6766 1.9564 -0.8899 31 1 4.4185 2.4703 1.5843 32 1 3.6476 0.9288 2.0291 33 1 5.1894 0.9288 1.1398 34 1 6.0120 1.4989 -0.3280 35 1 4.7771 2.4853 -3.4699 36 1 5.9950 2.3342 -5.5829 37 1 9.5942 -1.8845 -5.6192 38 1 9.0467 -0.0047 -3.6329 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000455697149.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:25:39 Heat of formation + Delta-G solvation = -17.927115 kcal Electronic energy + Delta-G solvation = -21404.503089 eV Core-core repulsion = 18079.563858 eV Total energy + Delta-G solvation = -3324.939231 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 296.103 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -40.16080 -37.85253 -35.93925 -35.49415 -34.48653 -33.48674 -32.55246 -29.41854 -28.97262 -27.42216 -26.04850 -24.52201 -22.04405 -21.48695 -20.75931 -19.32590 -18.03376 -17.39747 -16.67747 -15.46619 -15.44436 -15.14860 -14.85623 -14.29223 -13.90287 -13.72919 -13.15951 -13.06080 -12.88427 -12.67727 -12.42701 -12.31177 -12.05988 -11.80449 -11.59530 -11.41906 -11.36156 -11.10010 -10.91668 -10.70814 -10.56073 -10.32261 -10.00699 -9.73761 -9.53417 -9.26752 -8.95564 -8.53893 -7.51470 -6.95181 -6.68335 -4.43024 2.48486 2.85944 2.92913 3.07319 3.09083 3.11947 3.21608 3.65408 3.93872 4.30480 4.60262 4.91156 4.93812 5.01672 5.23755 5.32455 5.38619 5.48032 5.55307 5.65121 5.75635 5.93197 6.07806 6.22686 6.23452 6.48292 6.60841 6.75773 6.89510 7.03642 7.11029 7.24897 7.37700 7.70817 7.73541 7.94811 8.14229 8.35743 8.46649 8.78479 8.83125 9.03813 10.22194 Molecular weight = 296.10amu Principal moments of inertia in cm(-1) A = 0.022419 B = 0.003916 C = 0.003609 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1248.626203 B = 7147.640386 C = 7756.635952 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.142 4.142 3 C 0.136 3.864 4 N -0.639 5.639 5 C 0.079 3.921 6 C 0.699 3.301 7 O -0.575 6.575 8 N -0.665 5.665 9 C 0.032 3.968 10 C -0.076 4.076 11 C -0.200 4.200 12 C 0.107 3.893 13 C -0.457 4.457 14 H 0.080 0.920 15 C 0.069 3.931 16 N -0.806 5.806 17 Si 0.918 3.082 18 H -0.265 1.265 19 H -0.279 1.279 20 H -0.265 1.265 21 C -0.135 4.135 22 C -0.024 4.024 23 Cl -0.122 7.122 24 H 0.052 0.948 25 H 0.057 0.943 26 H 0.054 0.946 27 H 0.069 0.931 28 H 0.059 0.941 29 H 0.071 0.929 30 H 0.084 0.916 31 H 0.053 0.947 32 H 0.071 0.929 33 H 0.067 0.933 34 H 0.395 0.605 35 H 0.120 0.880 36 H 0.103 0.897 37 H 0.281 0.719 38 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.738 2.455 11.902 14.407 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.181 4.181 3 C 0.013 3.987 4 N -0.377 5.377 5 C -0.065 4.065 6 C 0.401 3.599 7 O -0.452 6.452 8 N -0.313 5.313 9 C -0.062 4.062 10 C -0.096 4.096 11 C -0.220 4.220 12 C 0.104 3.896 13 C -0.488 4.488 14 H 0.098 0.902 15 C -0.147 4.147 16 N -0.432 5.432 17 Si 0.743 3.257 18 H -0.190 1.190 19 H -0.204 1.204 20 H -0.190 1.190 21 C -0.156 4.156 22 C -0.053 4.053 23 Cl -0.094 7.094 24 H 0.071 0.929 25 H 0.076 0.924 26 H 0.073 0.927 27 H 0.088 0.912 28 H 0.077 0.923 29 H 0.089 0.911 30 H 0.102 0.898 31 H 0.072 0.928 32 H 0.090 0.910 33 H 0.085 0.915 34 H 0.230 0.770 35 H 0.138 0.862 36 H 0.121 0.879 37 H 0.092 0.908 38 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -8.030 2.143 11.308 14.033 hybrid contribution 0.684 -0.428 -0.003 0.807 sum -7.345 1.715 11.305 13.590 Atomic orbital electron populations 1.21678 0.95353 1.01756 1.01735 1.21919 0.95857 0.97690 1.02616 1.21310 0.78010 0.96685 1.02736 1.47053 1.06480 1.79447 1.04731 1.21695 0.97233 1.01453 0.86080 1.15911 0.81976 0.78314 0.83692 1.90887 1.67657 1.57269 1.29409 1.42204 1.04095 1.76218 1.08771 1.16735 0.94849 1.08327 0.86318 1.20427 0.99154 0.98518 0.91513 1.20902 0.96388 1.08112 0.96614 1.17588 0.90160 0.89659 0.92238 1.19455 1.26118 1.00752 1.02450 0.90199 1.25912 0.94427 0.95331 0.99007 1.69734 1.33261 1.05724 1.34516 0.86200 0.79644 0.78171 0.81691 1.18971 1.20366 1.19009 1.21180 1.01511 1.04159 0.88718 1.20407 0.96620 1.00841 0.87383 1.98242 1.87600 1.81959 1.41586 0.92897 0.92421 0.92659 0.91231 0.92266 0.91083 0.89792 0.92838 0.91032 0.91463 0.76954 0.86245 0.87917 0.90790 0.83846 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.34 9.91 37.15 0.37 -0.97 16 2 C -0.14 -1.61 6.26 -26.74 -0.17 -1.78 16 3 C 0.14 1.61 5.41 -4.04 -0.02 1.59 16 4 N -0.64 -8.85 2.87 -187.35 -0.54 -9.39 16 5 C 0.08 0.79 10.17 59.85 0.61 1.40 16 6 C 0.70 13.02 8.11 -86.92 -0.71 12.31 16 7 O -0.58 -12.81 13.30 5.29 0.07 -12.74 16 8 N -0.67 -12.48 4.86 -14.07 -0.07 -12.55 16 9 C 0.03 0.72 6.32 -83.52 -0.53 0.19 16 10 C -0.08 -1.79 8.61 -39.80 -0.34 -2.14 16 11 C -0.20 -4.92 9.74 -39.25 -0.38 -5.30 16 12 C 0.11 2.79 5.55 -106.80 -0.59 2.20 16 13 C -0.46 -11.86 9.02 -37.86 -0.34 -12.20 16 14 H 0.08 1.97 7.85 -52.49 -0.41 1.56 16 15 C 0.07 1.72 5.42 -17.34 -0.09 1.62 16 16 N -0.81 -20.67 10.60 55.54 0.59 -20.08 16 17 Si 0.92 18.65 29.56 -169.99 -5.03 13.62 16 18 H -0.27 -5.28 7.11 56.52 0.40 -4.87 16 19 H -0.28 -5.55 7.11 56.52 0.40 -5.14 16 20 H -0.27 -5.37 7.11 56.52 0.40 -4.97 16 21 C -0.14 -3.45 8.38 -39.23 -0.33 -3.77 16 22 C -0.02 -0.56 6.30 -39.72 -0.25 -0.81 16 23 Cl -0.12 -2.38 27.92 -51.86 -1.45 -3.82 16 24 H 0.05 0.40 8.14 -51.93 -0.42 -0.03 16 25 H 0.06 0.54 8.14 -51.93 -0.42 0.12 16 26 H 0.05 0.47 8.14 -51.92 -0.42 0.05 16 27 H 0.07 1.00 8.14 -51.93 -0.42 0.58 16 28 H 0.06 0.61 8.14 -51.93 -0.42 0.19 16 29 H 0.07 0.63 8.07 -51.93 -0.42 0.21 16 30 H 0.08 1.14 7.42 -51.93 -0.39 0.75 16 31 H 0.05 0.46 8.14 -51.93 -0.42 0.04 16 32 H 0.07 0.55 8.07 -51.93 -0.42 0.13 16 33 H 0.07 0.69 6.42 -51.93 -0.33 0.36 16 34 H 0.39 6.32 5.84 -40.82 -0.24 6.09 16 35 H 0.12 2.80 6.17 -52.48 -0.32 2.48 16 36 H 0.10 2.37 8.06 -52.49 -0.42 1.94 16 37 H 0.28 6.64 8.30 -40.82 -0.34 6.30 16 38 H 0.14 3.81 6.13 -52.49 -0.32 3.49 16 LS Contribution 330.81 15.07 4.99 4.99 Total: -1.00 -29.20 330.81 -9.16 -38.36 By element: Atomic # 1 Polarization: 14.22 SS G_CDS: -4.95 Total: 9.27 kcal Atomic # 6 Polarization: -4.88 SS G_CDS: -2.78 Total: -7.66 kcal Atomic # 7 Polarization: -42.00 SS G_CDS: -0.02 Total: -42.01 kcal Atomic # 8 Polarization: -12.81 SS G_CDS: 0.07 Total: -12.74 kcal Atomic # 14 Polarization: 18.65 SS G_CDS: -5.03 Total: 13.62 kcal Atomic # 17 Polarization: -2.38 SS G_CDS: -1.45 Total: -3.82 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -29.20 -9.16 -38.36 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000455697149.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.430 kcal (2) G-P(sol) polarization free energy of solvation -29.198 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.768 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.160 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.357 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.927 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds