Wall clock time and date at job start Tue Mar 31 2020 07:26:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.38139 * 119.97622 * 2 1 4 4 C 1.38729 * 119.95551 * 180.23644 * 3 2 1 5 5 O 1.35941 * 120.04165 * 179.78793 * 4 3 2 6 6 C 1.34253 * 116.99987 * 248.96689 * 5 4 3 7 7 O 1.20832 * 120.00168 * 5.77624 * 6 5 4 8 8 C 1.50694 * 119.99958 * 185.77520 * 6 5 4 9 9 S 1.81001 * 109.47251 * 180.02562 * 8 6 5 10 10 C 1.76202 * 100.00242 * 179.97438 * 9 8 6 11 11 H 1.07993 * 119.99587 * 0.02562 * 10 9 8 12 12 C 1.38793 * 119.99833 * 179.97438 * 10 9 8 13 13 N 1.31628 * 120.00133 * 0.02562 * 12 10 9 14 14 Si 1.86799 * 119.99893 * 180.02562 * 12 10 9 15 15 H 1.48508 * 109.47269 * 359.97438 * 14 12 10 16 16 H 1.48493 * 109.47376 * 120.00346 * 14 12 10 17 17 H 1.48501 * 109.47267 * 240.00522 * 14 12 10 18 18 C 1.38725 * 119.91217 * 359.76261 * 4 3 2 19 19 C 1.38137 * 119.96269 * 0.02562 * 18 4 3 20 20 C 1.50696 * 119.98039 * 180.02562 * 19 18 4 21 21 C 1.38369 * 119.97750 * 179.74329 * 2 1 3 22 22 Cl 1.73592 * 119.96131 * 0.02562 * 21 2 1 23 23 H 1.09007 * 109.46894 * 270.25257 * 1 2 3 24 24 H 1.09001 * 109.47367 * 30.25535 * 1 2 3 25 25 H 1.08997 * 109.46780 * 150.25924 * 1 2 3 26 26 H 1.08005 * 120.02232 * 0.02562 * 3 2 1 27 27 H 1.09010 * 109.46964 * 300.00013 * 8 6 5 28 28 H 1.08998 * 109.47661 * 60.00045 * 8 6 5 29 29 H 0.97005 * 119.99737 * 179.97438 * 13 12 10 30 30 H 1.08001 * 120.01934 * 179.97438 * 18 4 3 31 31 H 1.09003 * 109.47186 * 269.97655 * 20 19 18 32 32 H 1.09000 * 109.47000 * 29.97847 * 20 19 18 33 33 H 1.09000 * 109.46976 * 149.97838 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1973 1.1966 0.0000 4 6 3.5845 1.1961 -0.0050 5 8 4.2655 2.3726 -0.0093 6 6 4.9384 2.6833 -1.1288 7 8 4.8366 1.9837 -2.1087 8 6 5.8207 3.9044 -1.1632 9 16 6.5842 4.0513 -2.7977 10 6 7.5315 5.5183 -2.5623 11 1 7.5101 6.0278 -1.6104 12 6 8.3058 6.0182 -3.6000 13 7 8.3321 5.3968 -4.7601 14 14 9.3106 7.5730 -3.3503 15 1 9.1093 8.0758 -1.9675 16 1 10.7491 7.2724 -3.5637 17 1 8.8717 8.6074 -4.3212 18 6 4.2759 -0.0066 -0.0049 19 6 3.5822 -1.2011 -0.0005 20 6 4.3328 -2.5078 0.0001 21 6 2.1984 -1.1986 0.0054 22 17 1.3289 -2.7010 0.0114 23 1 -0.3633 0.0045 1.0277 24 1 -0.3634 0.8877 -0.5178 25 1 -0.3633 -0.8923 -0.5098 26 1 1.6572 2.1319 0.0004 27 1 5.2207 4.7920 -0.9617 28 1 6.5987 3.8121 -0.4054 29 1 8.8731 5.7465 -5.4854 30 1 5.3559 -0.0090 -0.0092 31 1 4.5105 -2.8253 -1.0274 32 1 5.2871 -2.3784 0.5107 33 1 3.7436 -3.2650 0.5175 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000298725772.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:26:30 Heat of formation + Delta-G solvation = -70.460541 kcal Electronic energy + Delta-G solvation = -18753.433921 eV Core-core repulsion = 15510.387644 eV Total energy + Delta-G solvation = -3243.046278 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 300.037 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -41.22983 -39.26105 -36.95929 -36.30107 -33.96726 -32.53805 -31.41165 -29.58274 -27.51524 -27.10093 -25.62796 -23.39912 -21.32554 -20.57552 -18.07380 -17.59901 -17.09924 -16.89954 -16.26594 -15.24636 -14.89344 -14.61546 -14.40548 -14.05328 -13.44117 -13.37280 -13.32779 -13.12720 -12.97777 -12.77665 -12.29507 -12.27220 -12.07375 -11.76682 -11.43437 -11.14437 -11.13309 -11.11007 -10.86358 -10.66336 -10.24602 -9.95714 -9.17353 -8.91717 -8.64334 -8.43046 -6.67539 -6.32577 -4.06229 0.74062 0.99872 1.90516 2.41977 2.53324 3.16700 3.16769 3.25235 3.32948 3.53726 4.09394 4.38777 4.45194 4.65347 4.96349 5.00542 5.03676 5.18054 5.20667 5.34513 5.36527 5.42968 5.44887 5.51099 5.65923 5.77503 5.91273 5.96265 5.97535 6.04809 6.13130 6.34060 6.75100 7.50834 8.04499 8.25405 9.13164 10.74930 Molecular weight = 300.04amu Principal moments of inertia in cm(-1) A = 0.037734 B = 0.002818 C = 0.002739 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 741.863234 B = 9933.004804 C =10218.650068 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.058 4.058 3 C -0.117 4.117 4 C 0.110 3.890 5 O -0.299 6.299 6 C 0.476 3.524 7 O -0.465 6.465 8 C -0.127 4.127 9 S -0.056 6.056 10 C -0.537 4.537 11 H 0.078 0.922 12 C 0.075 3.925 13 N -0.867 5.867 14 Si 0.923 3.077 15 H -0.270 1.270 16 H -0.279 1.279 17 H -0.279 1.279 18 C -0.121 4.121 19 C -0.054 4.054 20 C -0.119 4.119 21 C -0.045 4.045 22 Cl -0.065 7.065 23 H 0.077 0.923 24 H 0.074 0.926 25 H 0.075 0.925 26 H 0.141 0.859 27 H 0.107 0.893 28 H 0.107 0.893 29 H 0.270 0.730 30 H 0.138 0.862 31 H 0.080 0.920 32 H 0.073 0.927 33 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.945 -12.747 12.117 21.837 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.059 4.059 3 C -0.136 4.136 4 C 0.068 3.932 5 O -0.215 6.215 6 C 0.318 3.682 7 O -0.347 6.347 8 C -0.275 4.275 9 S 0.171 5.829 10 C -0.685 4.685 11 H 0.096 0.904 12 C -0.135 4.135 13 N -0.501 5.501 14 Si 0.749 3.251 15 H -0.195 1.195 16 H -0.205 1.205 17 H -0.205 1.205 18 C -0.140 4.140 19 C -0.055 4.055 20 C -0.176 4.176 21 C -0.072 4.072 22 Cl -0.036 7.036 23 H 0.096 0.904 24 H 0.093 0.907 25 H 0.094 0.906 26 H 0.159 0.841 27 H 0.125 0.875 28 H 0.125 0.875 29 H 0.080 0.920 30 H 0.156 0.844 31 H 0.098 0.902 32 H 0.092 0.908 33 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -13.103 -13.776 10.687 21.810 hybrid contribution 0.754 1.676 1.172 2.180 sum -12.348 -12.100 11.859 20.965 Atomic orbital electron populations 1.20875 0.89676 1.03797 1.03062 1.19539 0.96845 0.90520 0.98976 1.20906 0.92171 0.98322 1.02206 1.18573 0.90486 0.84403 0.99697 1.84667 1.59774 1.36298 1.40793 1.23802 0.77765 0.86774 0.79869 1.90719 1.59287 1.50510 1.34232 1.23341 1.00137 0.94766 1.09218 1.85478 1.56437 1.36006 1.05006 1.22873 1.32103 1.11457 1.02045 0.90425 1.25011 0.96172 0.97983 0.94340 1.70017 1.38535 1.38945 1.02651 0.86054 0.79338 0.81243 0.78511 1.19463 1.20470 1.20472 1.21172 1.00840 0.90559 1.01442 1.19554 0.91433 0.96053 0.98489 1.20893 1.00075 0.93198 1.03400 1.20646 0.91612 0.86785 1.08123 1.98334 1.76306 1.32123 1.96874 0.90418 0.90748 0.90600 0.84133 0.87525 0.87516 0.92050 0.84446 0.90177 0.90783 0.90654 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.99 9.61 36.01 0.35 -0.65 16 2 C -0.06 -0.66 5.88 -104.61 -0.62 -1.28 16 3 C -0.12 -1.50 9.64 -39.44 -0.38 -1.88 16 4 C 0.11 1.64 5.27 -39.22 -0.21 1.44 16 5 O -0.30 -4.84 10.04 -23.64 -0.24 -5.08 16 6 C 0.48 8.98 7.75 36.00 0.28 9.26 16 7 O -0.47 -10.11 15.27 -18.75 -0.29 -10.40 16 8 C -0.13 -2.49 6.27 36.00 0.23 -2.27 16 9 S -0.06 -1.45 20.57 -107.50 -2.21 -3.66 16 10 C -0.54 -14.74 9.50 30.94 0.29 -14.45 16 11 H 0.08 2.02 7.80 -52.49 -0.41 1.61 16 12 C 0.07 2.06 5.49 -17.43 -0.10 1.97 16 13 N -0.87 -25.36 13.22 55.49 0.73 -24.63 16 14 Si 0.92 20.82 29.55 -169.99 -5.02 15.79 16 15 H -0.27 -5.91 7.11 56.52 0.40 -5.51 16 16 H -0.28 -6.20 7.11 56.52 0.40 -5.80 16 17 H -0.28 -6.21 7.11 56.52 0.40 -5.81 16 18 C -0.12 -1.68 8.98 -39.44 -0.35 -2.04 16 19 C -0.05 -0.66 5.88 -104.61 -0.62 -1.28 16 20 C -0.12 -1.13 9.61 36.00 0.35 -0.79 16 21 C -0.05 -0.53 6.31 -39.48 -0.25 -0.78 16 22 Cl -0.07 -0.65 25.62 -51.86 -1.33 -1.97 16 23 H 0.08 0.55 8.14 -51.93 -0.42 0.13 16 24 H 0.07 0.56 8.09 -51.93 -0.42 0.14 16 25 H 0.08 0.62 6.90 -51.93 -0.36 0.26 16 26 H 0.14 1.55 8.06 -52.48 -0.42 1.12 16 27 H 0.11 1.92 8.14 -51.91 -0.42 1.50 16 28 H 0.11 1.91 8.14 -51.92 -0.42 1.49 16 29 H 0.27 7.32 8.31 -40.82 -0.34 6.98 16 30 H 0.14 1.83 8.06 -52.49 -0.42 1.41 16 31 H 0.08 0.74 8.14 -51.93 -0.42 0.32 16 32 H 0.07 0.62 8.08 -51.93 -0.42 0.20 16 33 H 0.07 0.64 6.90 -51.93 -0.36 0.28 16 LS Contribution 320.56 15.07 4.83 4.83 Total: -1.00 -31.35 320.56 -8.19 -39.53 By element: Atomic # 1 Polarization: 1.95 SS G_CDS: -3.64 Total: -1.68 kcal Atomic # 6 Polarization: -11.70 SS G_CDS: -1.03 Total: -12.73 kcal Atomic # 7 Polarization: -25.36 SS G_CDS: 0.73 Total: -24.63 kcal Atomic # 8 Polarization: -14.96 SS G_CDS: -0.52 Total: -15.48 kcal Atomic # 14 Polarization: 20.82 SS G_CDS: -5.02 Total: 15.79 kcal Atomic # 16 Polarization: -1.45 SS G_CDS: -2.21 Total: -3.66 kcal Atomic # 17 Polarization: -0.65 SS G_CDS: -1.33 Total: -1.97 kcal Total LS contribution 4.83 Total: 4.83 kcal Total: -31.35 -8.19 -39.53 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000298725772.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.927 kcal (2) G-P(sol) polarization free energy of solvation -31.348 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.275 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.185 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.534 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.461 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds