Wall clock time and date at job start Tue Mar 31 2020 07:30:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 N 1.46506 * 109.47027 * 2 1 4 4 C 1.46503 * 119.99626 * 270.00210 * 3 2 1 5 5 C 1.50706 * 109.46550 * 269.99580 * 4 3 2 6 6 H 1.07992 * 120.00269 * 359.97438 * 5 4 3 7 7 C 1.37879 * 119.99402 * 180.02562 * 5 4 3 8 8 N 1.31512 * 120.00435 * 359.97438 * 7 5 4 9 9 Si 1.86798 * 119.99398 * 180.02562 * 7 5 4 10 10 H 1.48499 * 109.47092 * 89.99981 * 9 7 5 11 11 H 1.48510 * 109.46828 * 209.99596 * 9 7 5 12 12 H 1.48501 * 109.47617 * 329.99498 * 9 7 5 13 13 C 1.34774 * 120.00272 * 89.99536 * 3 2 1 14 14 O 1.21566 * 119.99944 * 180.02562 * 13 3 2 15 15 C 1.47697 * 119.99837 * 0.02562 * 13 3 2 16 16 C 1.39745 * 120.16426 * 269.99886 * 15 13 3 17 17 Cl 1.73597 * 120.09036 * 359.70231 * 16 15 13 18 18 C 1.38092 * 119.82593 * 179.97438 * 16 15 13 19 19 C 1.38333 * 120.17115 * 359.97438 * 18 16 15 20 20 C 1.38328 * 120.33818 * 0.02562 * 19 18 16 21 21 C 1.38100 * 120.16598 * 359.97438 * 20 19 18 22 22 Cl 1.73600 * 120.08228 * 180.02562 * 21 20 19 23 23 H 1.09000 * 109.47644 * 300.00489 * 1 2 3 24 24 H 1.09008 * 109.47002 * 60.00271 * 1 2 3 25 25 H 1.08999 * 109.47151 * 179.97438 * 1 2 3 26 26 H 1.09002 * 109.47415 * 239.99999 * 2 1 3 27 27 H 1.08998 * 109.46997 * 119.99653 * 2 1 3 28 28 H 1.08997 * 109.47145 * 29.99602 * 4 3 2 29 29 H 1.09002 * 109.46880 * 150.00123 * 4 3 2 30 30 H 0.96994 * 119.99952 * 180.02562 * 8 7 5 31 31 H 1.08000 * 119.91523 * 180.02562 * 18 16 15 32 32 H 1.07998 * 119.82992 * 179.97438 * 19 18 16 33 33 H 1.07997 * 119.91895 * 179.97438 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 6 2.2624 2.0718 -1.2688 5 6 3.6858 1.8350 -1.7037 6 1 4.3428 1.2310 -1.0957 7 6 4.1493 2.3905 -2.8775 8 7 3.3493 3.1265 -3.6177 9 14 5.9134 2.0964 -3.4170 10 1 5.9761 0.8758 -4.2605 11 1 6.3929 3.2640 -4.1994 12 1 6.7736 1.9157 -2.2200 13 6 2.2429 2.0167 1.1671 14 8 2.6476 3.1630 1.1671 15 6 1.9972 1.3203 2.4463 16 6 0.7411 1.3915 3.0546 17 17 -0.5346 2.3059 2.3128 18 6 0.5189 0.7373 4.2502 19 6 1.5356 0.0124 4.8455 20 6 2.7816 -0.0628 4.2494 21 6 3.0192 0.5861 3.0537 22 17 4.5835 0.4898 2.3072 23 1 -0.3634 0.5139 0.8899 24 1 -0.3633 0.5138 -0.8901 25 1 -0.3633 -1.0277 -0.0005 26 1 1.8934 -0.5138 -0.8900 27 1 1.8933 -0.5138 0.8900 28 1 1.5816 1.6876 -2.0284 29 1 2.0954 3.1411 -1.1385 30 1 3.6754 3.5169 -4.4436 31 1 -0.4514 0.7910 4.7214 32 1 1.3559 -0.4968 5.7808 33 1 3.5707 -0.6303 4.7202 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000042454255.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:30:34 Heat of formation + Delta-G solvation = -21.924834 kcal Electronic energy + Delta-G solvation = -20415.685620 eV Core-core repulsion = 17107.274391 eV Total energy + Delta-G solvation = -3308.411229 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 301.038 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.08656 -38.16771 -36.75888 -36.23724 -35.27193 -32.80721 -31.29515 -30.82512 -30.06200 -27.14164 -24.22913 -23.12740 -22.76312 -22.17704 -19.13893 -17.39050 -16.61417 -16.35732 -16.08973 -15.72403 -14.95894 -14.48175 -14.36692 -13.88889 -13.80041 -13.38206 -13.06440 -12.58403 -12.32409 -12.26255 -11.97918 -11.80962 -11.58053 -11.23939 -11.10655 -11.05185 -10.87338 -10.81976 -10.56274 -10.45723 -10.11007 -9.60814 -9.23141 -8.88365 -8.86157 -8.40055 -7.67476 -6.01151 -4.04981 0.78519 0.82092 1.81645 2.23945 3.20319 3.21721 3.32160 3.38897 3.43910 3.81222 4.46103 4.54259 4.70782 4.88473 4.95126 5.18459 5.27582 5.34277 5.41374 5.67926 5.76488 5.86501 5.87856 5.95486 6.10832 6.28045 6.30587 6.56643 7.05739 7.45325 7.53709 7.95454 8.26097 8.35380 8.87193 9.03870 9.59476 11.07169 Molecular weight = 301.04amu Principal moments of inertia in cm(-1) A = 0.017966 B = 0.006061 C = 0.005073 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1558.151581 B = 4618.435791 C = 5518.416552 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.107 3.893 3 N -0.578 5.578 4 C 0.248 3.752 5 C -0.522 4.522 6 H 0.059 0.941 7 C 0.062 3.938 8 N -0.895 5.895 9 Si 0.895 3.105 10 H -0.280 1.280 11 H -0.285 1.285 12 H -0.274 1.274 13 C 0.553 3.447 14 O -0.518 6.518 15 C -0.089 4.089 16 C -0.004 4.004 17 Cl -0.040 7.040 18 C -0.110 4.110 19 C -0.092 4.092 20 C -0.109 4.109 21 C -0.005 4.005 22 Cl -0.034 7.034 23 H 0.059 0.941 24 H 0.061 0.939 25 H 0.058 0.942 26 H 0.085 0.915 27 H 0.059 0.941 28 H 0.035 0.965 29 H 0.044 0.956 30 H 0.263 0.737 31 H 0.142 0.858 32 H 0.143 0.857 33 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.759 -9.813 16.332 20.216 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C -0.017 4.017 3 N -0.309 5.309 4 C 0.129 3.871 5 C -0.561 4.561 6 H 0.078 0.922 7 C -0.140 4.140 8 N -0.534 5.534 9 Si 0.723 3.277 10 H -0.207 1.207 11 H -0.211 1.211 12 H -0.199 1.199 13 C 0.337 3.663 14 O -0.395 6.395 15 C -0.094 4.094 16 C -0.032 4.032 17 Cl -0.011 7.011 18 C -0.129 4.129 19 C -0.110 4.110 20 C -0.128 4.128 21 C -0.033 4.033 22 Cl -0.005 7.005 23 H 0.078 0.922 24 H 0.080 0.920 25 H 0.077 0.923 26 H 0.103 0.897 27 H 0.077 0.923 28 H 0.053 0.947 29 H 0.063 0.937 30 H 0.072 0.928 31 H 0.160 0.840 32 H 0.160 0.840 33 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -6.516 -9.003 15.960 19.449 hybrid contribution 0.990 -0.149 -0.503 1.121 sum -5.526 -9.152 15.457 18.794 Atomic orbital electron populations 1.22412 0.96570 1.01574 1.03194 1.21407 0.93777 0.83988 1.02508 1.48159 1.62421 1.13181 1.07113 1.19332 0.96486 0.93644 0.77622 1.21425 0.96763 1.31770 1.06172 0.92242 1.24908 0.97708 0.94958 0.96430 1.69928 1.35632 1.33518 1.14328 0.86540 0.84900 0.77664 0.78603 1.20652 1.21102 1.19916 1.17690 0.79402 0.86348 0.82864 1.90803 1.45275 1.16965 1.86433 1.20135 0.92079 0.98816 0.98342 1.20814 0.89126 0.98017 0.95246 1.98403 1.48895 1.72038 1.81728 1.21077 1.00761 0.97370 0.93672 1.21121 0.91776 0.98176 0.99943 1.21115 0.98363 0.99664 0.93684 1.20916 0.88161 0.99129 0.95117 1.98448 1.23739 1.96833 1.81433 0.92191 0.91958 0.92304 0.89674 0.92268 0.94706 0.93747 0.92767 0.83997 0.83956 0.83965 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.65 10.24 37.16 0.38 -2.27 16 2 C 0.11 1.86 5.95 -4.04 -0.02 1.84 16 3 N -0.58 -12.62 2.46 -176.22 -0.43 -13.05 16 4 C 0.25 6.53 5.16 -5.19 -0.03 6.51 16 5 C -0.52 -14.87 9.39 -34.44 -0.32 -15.19 16 6 H 0.06 1.70 7.81 -52.49 -0.41 1.29 16 7 C 0.06 1.78 5.46 -17.82 -0.10 1.68 16 8 N -0.89 -26.73 13.29 55.43 0.74 -26.00 16 9 Si 0.90 22.15 29.54 -169.99 -5.02 17.13 16 10 H -0.28 -6.72 7.11 56.52 0.40 -6.32 16 11 H -0.29 -7.00 7.11 56.52 0.40 -6.60 16 12 H -0.27 -6.80 7.11 56.52 0.40 -6.39 16 13 C 0.55 12.11 5.22 -12.40 -0.06 12.04 16 14 O -0.52 -13.66 16.68 5.31 0.09 -13.58 16 15 C -0.09 -1.53 3.92 -104.91 -0.41 -1.94 16 16 C 0.00 -0.06 5.67 -39.07 -0.22 -0.28 16 17 Cl -0.04 -0.59 25.60 -51.86 -1.33 -1.92 16 18 C -0.11 -1.14 9.82 -39.60 -0.39 -1.53 16 19 C -0.09 -0.81 10.03 -39.51 -0.40 -1.20 16 20 C -0.11 -1.18 9.82 -39.60 -0.39 -1.57 16 21 C -0.01 -0.08 5.92 -39.07 -0.23 -0.31 16 22 Cl -0.03 -0.57 28.04 -51.86 -1.45 -2.02 16 23 H 0.06 0.87 4.49 -51.93 -0.23 0.64 16 24 H 0.06 0.98 8.14 -51.92 -0.42 0.56 16 25 H 0.06 0.70 8.14 -51.93 -0.42 0.28 16 26 H 0.08 1.50 8.07 -51.93 -0.42 1.08 16 27 H 0.06 0.93 6.54 -51.93 -0.34 0.59 16 28 H 0.03 0.92 8.07 -51.93 -0.42 0.51 16 29 H 0.04 1.32 7.42 -51.93 -0.39 0.94 16 30 H 0.26 7.42 8.31 -40.82 -0.34 7.08 16 31 H 0.14 1.07 8.06 -52.49 -0.42 0.65 16 32 H 0.14 0.73 8.06 -52.49 -0.42 0.31 16 33 H 0.14 1.16 8.06 -52.49 -0.42 0.74 16 LS Contribution 314.68 15.07 4.74 4.74 Total: -1.00 -33.26 314.68 -8.32 -41.58 By element: Atomic # 1 Polarization: -1.20 SS G_CDS: -3.46 Total: -4.66 kcal Atomic # 6 Polarization: -0.03 SS G_CDS: -2.19 Total: -2.22 kcal Atomic # 7 Polarization: -39.35 SS G_CDS: 0.30 Total: -39.05 kcal Atomic # 8 Polarization: -13.66 SS G_CDS: 0.09 Total: -13.58 kcal Atomic # 14 Polarization: 22.15 SS G_CDS: -5.02 Total: 17.13 kcal Atomic # 17 Polarization: -1.16 SS G_CDS: -2.78 Total: -3.95 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -33.26 -8.32 -41.58 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000042454255.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.651 kcal (2) G-P(sol) polarization free energy of solvation -33.259 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.608 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.317 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.576 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.925 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds