Wall clock time and date at job start Tue Mar 31 2020 07:26:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 H 1.09000 * 109.47346 * 2 1 4 4 C 1.50704 * 109.47122 * 240.00415 * 2 1 3 5 5 O 1.21290 * 119.99885 * 240.00119 * 4 2 1 6 6 N 1.34783 * 120.00038 * 60.00069 * 4 2 1 7 7 C 1.46498 * 119.99529 * 359.97438 * 6 4 2 8 8 C 1.37091 * 120.00179 * 179.97438 * 6 4 2 9 9 H 1.08000 * 119.99646 * 338.13541 * 8 6 4 10 10 C 1.38951 * 120.00198 * 158.40385 * 8 6 4 11 11 N 1.31414 * 119.99952 * 346.88259 * 10 8 6 12 12 Si 1.86793 * 120.00243 * 166.87889 * 10 8 6 13 13 H 1.48504 * 109.47277 * 93.85454 * 12 10 8 14 14 H 1.48500 * 109.47279 * 213.85674 * 12 10 8 15 15 H 1.48500 * 109.47183 * 333.85410 * 12 10 8 16 16 C 1.50699 * 109.47377 * 120.00705 * 2 1 3 17 17 C 1.38331 * 120.01299 * 59.71988 * 16 2 1 18 18 Cl 1.73595 * 120.00797 * 0.02562 * 17 16 2 19 19 C 1.38364 * 119.98537 * 179.75362 * 17 16 2 20 20 C 1.38225 * 120.00911 * 0.54848 * 19 17 16 21 21 C 1.38219 * 120.03125 * 359.70416 * 20 19 17 22 22 C 1.38327 * 120.01053 * 240.00241 * 16 2 1 23 23 Cl 1.73599 * 120.01002 * 359.97438 * 22 16 2 24 24 H 1.08997 * 109.47514 * 179.97438 * 1 2 3 25 25 H 1.08999 * 109.47110 * 299.99545 * 1 2 3 26 26 H 1.09005 * 109.47500 * 59.99812 * 1 2 3 27 27 H 1.09002 * 109.47408 * 266.77314 * 7 6 4 28 28 H 1.08998 * 109.47606 * 26.77462 * 7 6 4 29 29 H 1.08998 * 109.46937 * 146.77760 * 7 6 4 30 30 H 0.96991 * 120.00154 * 179.97438 * 11 10 8 31 31 H 1.07998 * 119.99605 * 180.25770 * 19 17 16 32 32 H 1.08005 * 119.98280 * 179.72984 * 20 19 17 33 33 H 1.07999 * 119.99818 * 180.02562 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0323 -0.7103 -1.2305 5 8 2.7296 -1.6965 -1.1193 6 7 1.7067 -0.2498 -2.4547 7 6 0.8640 0.9410 -2.5889 8 6 2.1641 -0.8956 -3.5741 9 1 3.0379 -1.5274 -3.5138 10 6 1.5067 -0.7330 -4.7874 11 7 0.3149 -0.1803 -4.8201 12 14 2.3171 -1.2998 -6.3721 13 1 1.8692 -2.6792 -6.6912 14 1 1.9336 -0.3864 -7.4784 15 1 3.7927 -1.2843 -6.2065 16 6 2.0323 -0.7105 1.2303 17 6 1.6936 -2.0332 1.4523 18 17 0.6901 -2.8754 0.3133 19 6 2.1593 -2.6866 2.5795 20 6 2.9536 -2.0144 3.4895 21 6 3.2882 -0.6913 3.2709 22 6 2.8276 -0.0386 2.1411 23 17 3.2477 1.6233 1.8668 24 1 -0.3634 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5139 -0.8900 27 1 -0.1795 0.6394 -2.6800 28 1 0.9841 1.5724 -1.7085 29 1 1.1603 1.4974 -3.4781 30 1 -0.1438 -0.0664 -5.6671 31 1 1.8984 -3.7205 2.7509 32 1 3.3134 -2.5236 4.3714 33 1 3.9091 -0.1668 3.9820 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000608777538.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:26:52 Heat of formation + Delta-G solvation = -3.796312 kcal Electronic energy + Delta-G solvation = -20570.690424 eV Core-core repulsion = 17263.065307 eV Total energy + Delta-G solvation = -3307.625117 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 301.038 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -39.86536 -38.17360 -36.51235 -35.90917 -34.65624 -33.68418 -31.48485 -30.45649 -29.20794 -26.16196 -25.02735 -23.67736 -22.62849 -21.56440 -18.85503 -17.05196 -16.83756 -16.49610 -15.38374 -15.23217 -14.46005 -14.26297 -14.13212 -13.96634 -13.65900 -13.32320 -12.77111 -12.57761 -12.14973 -11.96030 -11.77061 -11.58761 -11.40896 -11.26661 -11.17968 -10.88214 -10.70354 -10.60862 -10.48862 -10.28832 -10.16821 -9.70602 -8.94671 -8.67341 -8.45388 -8.18640 -7.59490 -6.25262 -3.79792 1.15357 1.25924 2.09512 2.63831 3.19538 3.28036 3.34089 3.59223 3.96431 4.19794 4.66682 4.85872 4.98402 5.11577 5.20408 5.29687 5.51845 5.53049 5.70020 5.75793 5.95853 6.10930 6.16561 6.27526 6.30221 6.40450 6.46419 6.65654 6.73465 6.92694 7.27243 7.62718 8.19185 8.55593 9.25938 9.49989 10.06400 10.78680 Molecular weight = 301.04amu Principal moments of inertia in cm(-1) A = 0.020122 B = 0.005553 C = 0.004986 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1391.179749 B = 5040.832092 C = 5614.214997 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.077 4.077 3 H 0.098 0.902 4 C 0.461 3.539 5 O -0.576 6.576 6 N -0.444 5.444 7 C 0.111 3.889 8 C -0.300 4.300 9 H 0.098 0.902 10 C 0.029 3.971 11 N -0.884 5.884 12 Si 0.923 3.077 13 H -0.279 1.279 14 H -0.283 1.283 15 H -0.270 1.270 16 C -0.030 4.030 17 C 0.009 3.991 18 Cl -0.032 7.032 19 C -0.113 4.113 20 C -0.106 4.106 21 C -0.114 4.114 22 C -0.024 4.024 23 Cl -0.063 7.063 24 H 0.074 0.926 25 H 0.052 0.948 26 H 0.082 0.918 27 H 0.062 0.938 28 H 0.027 0.973 29 H 0.065 0.935 30 H 0.266 0.734 31 H 0.135 0.865 32 H 0.136 0.864 33 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.337 1.546 14.689 14.774 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.223 4.223 2 C -0.098 4.098 3 H 0.116 0.884 4 C 0.248 3.752 5 O -0.459 6.459 6 N -0.163 5.163 7 C -0.033 4.033 8 C -0.428 4.428 9 H 0.115 0.885 10 C -0.173 4.173 11 N -0.524 5.524 12 Si 0.750 3.250 13 H -0.205 1.205 14 H -0.209 1.209 15 H -0.195 1.195 16 C -0.032 4.032 17 C -0.018 4.018 18 Cl -0.003 7.003 19 C -0.132 4.132 20 C -0.125 4.125 21 C -0.133 4.133 22 C -0.051 4.051 23 Cl -0.034 7.034 24 H 0.093 0.907 25 H 0.071 0.929 26 H 0.101 0.899 27 H 0.081 0.919 28 H 0.046 0.954 29 H 0.083 0.917 30 H 0.076 0.924 31 H 0.153 0.847 32 H 0.154 0.846 33 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 0.486 1.196 14.419 14.477 hybrid contribution 0.212 -0.014 -1.039 1.060 sum 0.698 1.182 13.381 13.451 Atomic orbital electron populations 1.22316 0.92548 1.04605 1.02857 1.20342 0.97751 1.00287 0.91443 0.88371 1.19546 0.85877 0.86103 0.83650 1.90537 1.41861 1.27622 1.85901 1.43429 1.44693 1.24000 1.04206 1.21635 0.95959 0.87088 0.98601 1.19616 1.10846 1.27121 0.85173 0.88460 1.25280 0.95007 0.97431 0.99600 1.69999 1.11537 1.44244 1.26649 0.85968 0.79613 0.78379 0.81042 1.20508 1.20907 1.19491 1.19208 0.96006 0.92671 0.95274 1.20565 0.97404 0.91965 0.91912 1.98381 1.65829 1.76332 1.59744 1.21112 0.98359 1.00492 0.93236 1.20929 0.98291 0.93775 0.99480 1.20983 1.00808 0.95060 0.96467 1.20620 1.00959 0.86573 0.96953 1.98349 1.92157 1.16766 1.96166 0.90749 0.92886 0.89930 0.91930 0.95408 0.91667 0.92423 0.84703 0.84616 0.84761 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.90 8.55 37.15 0.32 -2.59 16 2 C -0.08 -1.48 1.89 -92.93 -0.18 -1.66 16 3 H 0.10 1.81 5.44 -51.93 -0.28 1.53 16 4 C 0.46 11.20 5.94 -10.98 -0.07 11.14 16 5 O -0.58 -15.58 13.60 5.55 0.08 -15.50 16 6 N -0.44 -11.42 3.02 -122.19 -0.37 -11.79 16 7 C 0.11 2.49 7.05 59.85 0.42 2.92 16 8 C -0.30 -8.40 9.30 -14.94 -0.14 -8.54 16 9 H 0.10 2.87 7.40 -52.49 -0.39 2.48 16 10 C 0.03 0.78 5.09 -17.47 -0.09 0.69 16 11 N -0.88 -23.64 10.65 55.50 0.59 -23.05 16 12 Si 0.92 21.07 29.57 -169.99 -5.03 16.04 16 13 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 14 H -0.28 -6.30 7.11 56.52 0.40 -5.90 16 15 H -0.27 -6.16 7.11 56.52 0.40 -5.76 16 16 C -0.03 -0.53 4.40 -104.56 -0.46 -0.99 16 17 C 0.01 0.15 5.47 -39.50 -0.22 -0.06 16 18 Cl -0.03 -0.61 22.81 -51.86 -1.18 -1.80 16 19 C -0.11 -1.57 9.83 -39.54 -0.39 -1.96 16 20 C -0.11 -1.25 10.04 -39.59 -0.40 -1.64 16 21 C -0.11 -1.45 9.83 -39.54 -0.39 -1.83 16 22 C -0.02 -0.37 6.31 -39.50 -0.25 -0.62 16 23 Cl -0.06 -0.91 27.00 -51.86 -1.40 -2.31 16 24 H 0.07 1.36 4.91 -51.93 -0.26 1.10 16 25 H 0.05 0.78 8.14 -51.93 -0.42 0.35 16 26 H 0.08 1.47 4.59 -51.93 -0.24 1.23 16 27 H 0.06 1.45 6.51 -51.93 -0.34 1.11 16 28 H 0.03 0.53 5.76 -51.93 -0.30 0.23 16 29 H 0.06 1.54 7.12 -51.93 -0.37 1.17 16 30 H 0.27 6.75 8.31 -40.82 -0.34 6.41 16 31 H 0.14 1.56 8.06 -52.49 -0.42 1.14 16 32 H 0.14 1.11 8.06 -52.48 -0.42 0.68 16 33 H 0.13 1.32 8.06 -52.49 -0.42 0.90 16 LS Contribution 294.03 15.07 4.43 4.43 Total: -1.00 -30.74 294.03 -7.71 -38.45 By element: Atomic # 1 Polarization: 3.68 SS G_CDS: -3.00 Total: 0.69 kcal Atomic # 6 Polarization: -3.33 SS G_CDS: -1.83 Total: -5.16 kcal Atomic # 7 Polarization: -35.06 SS G_CDS: 0.22 Total: -34.84 kcal Atomic # 8 Polarization: -15.58 SS G_CDS: 0.08 Total: -15.50 kcal Atomic # 14 Polarization: 21.07 SS G_CDS: -5.03 Total: 16.04 kcal Atomic # 17 Polarization: -1.53 SS G_CDS: -2.58 Total: -4.11 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -30.74 -7.71 -38.45 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000608777538.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.652 kcal (2) G-P(sol) polarization free energy of solvation -30.740 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.912 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.708 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.448 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.796 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds