Wall clock time and date at job start Tue Mar 31 2020 08:31:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.08999 * 109.47398 * 2 1 4 4 C 1.50695 * 109.47242 * 239.99638 * 2 1 3 5 5 O 1.20821 * 120.00389 * 240.00217 * 4 2 1 6 6 O 1.34271 * 119.99787 * 59.99968 * 4 2 1 7 7 C 1.35919 * 117.00010 * 175.01105 * 6 4 2 8 8 C 1.38830 * 120.02423 * 255.29028 * 7 6 4 9 9 C 1.38185 * 120.08280 * 179.74261 * 8 7 6 10 10 C 1.38150 * 120.12637 * 0.23526 * 9 8 7 11 11 C 1.38894 * 120.04043 * 0.02562 * 10 9 8 12 12 O 1.35754 * 120.04070 * 180.02562 * 11 10 9 13 13 C 1.34837 * 116.99978 * 174.40837 * 12 11 10 14 14 H 1.07996 * 119.99913 * 5.06166 * 13 12 11 15 15 C 1.38649 * 120.00026 * 185.06157 * 13 12 11 16 16 N 1.31559 * 119.99761 * 359.97438 * 15 13 12 17 17 Si 1.86802 * 120.00212 * 179.97438 * 15 13 12 18 18 H 1.48499 * 109.46674 * 0.02562 * 17 15 13 19 19 H 1.48505 * 109.47048 * 119.99663 * 17 15 13 20 20 H 1.48491 * 109.47117 * 239.99799 * 17 15 13 21 21 C 1.38580 * 120.02144 * 75.54220 * 7 6 4 22 22 C 1.53002 * 109.46971 * 119.99911 * 2 1 3 23 23 F 1.39896 * 109.47042 * 179.97438 * 22 2 1 24 24 F 1.39905 * 109.47176 * 299.99632 * 22 2 1 25 25 F 1.39901 * 109.47125 * 60.00145 * 22 2 1 26 26 H 1.09001 * 109.46987 * 180.02562 * 1 2 3 27 27 H 1.08997 * 109.46865 * 300.00576 * 1 2 3 28 28 H 1.08997 * 109.46607 * 60.00098 * 1 2 3 29 29 H 1.08000 * 119.95263 * 0.02562 * 8 7 6 30 30 H 1.08003 * 119.93721 * 180.25411 * 9 8 7 31 31 H 1.08002 * 119.98404 * 180.02562 * 10 9 8 32 32 H 0.97005 * 119.99754 * 180.02562 * 16 15 13 33 33 H 1.07997 * 120.05823 * 0.02562 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0324 -0.7105 -1.2304 5 8 2.7270 -1.6928 -1.1195 6 8 1.7080 -0.2518 -2.4499 7 6 2.2776 -0.8749 -3.5151 8 6 3.3134 -0.2613 -4.2065 9 6 3.8969 -0.8960 -5.2864 10 6 3.4484 -2.1406 -5.6845 11 6 2.4088 -2.7568 -4.9999 12 8 1.9685 -3.9800 -5.3908 13 6 1.0377 -4.5721 -4.6153 14 1 0.6168 -4.0398 -3.7752 15 6 0.6211 -5.8642 -4.8966 16 7 1.1335 -6.5124 -5.9204 17 14 -0.6678 -6.6848 -3.8220 18 1 -1.0817 -5.7504 -2.7446 19 1 -1.8489 -7.0399 -4.6492 20 1 -0.0980 -7.9160 -3.2183 21 6 1.8212 -2.1208 -3.9150 22 6 2.0400 -0.7212 1.2493 23 9 3.4390 -0.7218 1.2490 24 9 1.5737 -0.0617 2.3916 25 9 1.5737 -2.0402 1.2493 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5139 0.8899 28 1 -0.3632 0.5138 -0.8900 29 1 3.6666 0.7113 -3.8971 30 1 4.7053 -0.4184 -5.8201 31 1 3.9064 -2.6348 -6.5286 32 1 0.8417 -7.4163 -6.1174 33 1 1.0125 -2.5976 -3.3812 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000841345679.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 08:31:42 Heat of formation + Delta-G solvation = -228.853981 kcal Electronic energy + Delta-G solvation = -25029.395692 eV Core-core repulsion = 20606.848146 eV Total energy + Delta-G solvation = -4422.547546 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 304.075 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -50.29178 -47.81608 -47.67825 -41.17903 -38.94183 -37.35107 -35.84829 -34.49501 -32.35028 -29.82250 -28.99354 -26.76097 -25.57615 -24.78988 -22.42046 -21.69823 -20.60723 -19.06461 -18.64706 -18.36494 -17.88141 -17.69438 -16.90947 -16.25662 -15.72455 -15.21360 -14.83495 -14.66884 -14.35679 -14.33529 -14.12595 -13.95795 -13.86819 -13.82506 -13.61951 -13.50625 -13.17945 -12.90571 -12.60493 -12.37815 -11.95127 -11.79176 -11.60211 -11.36678 -11.13798 -10.93750 -10.57556 -10.51980 -10.41601 -9.58730 -8.92302 -8.27361 -7.42893 -6.52573 -4.12020 1.53535 1.98277 2.12301 2.30641 2.74501 3.09181 3.11917 3.17013 3.39955 3.73017 3.91113 3.97208 4.35053 4.45918 4.55576 4.62861 5.00321 5.13000 5.18123 5.25802 5.51406 5.68138 5.68849 5.91497 6.05986 6.13077 6.47012 6.72264 6.88956 7.00646 7.05087 7.26394 7.45085 7.87468 7.92356 8.92587 9.57334 10.64752 Molecular weight = 304.08amu Principal moments of inertia in cm(-1) A = 0.013580 B = 0.004995 C = 0.003963 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2061.368927 B = 5604.081997 C = 7064.484223 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.131 4.131 3 H 0.152 0.848 4 C 0.459 3.541 5 O -0.460 6.460 6 O -0.284 6.284 7 C 0.115 3.885 8 C -0.209 4.209 9 C -0.065 4.065 10 C -0.183 4.183 11 C 0.163 3.837 12 O -0.169 6.169 13 C -0.393 4.393 14 H 0.092 0.908 15 C 0.042 3.958 16 N -0.858 5.858 17 Si 0.941 3.059 18 H -0.266 1.266 19 H -0.274 1.274 20 H -0.274 1.274 21 C -0.227 4.227 22 C 0.471 3.529 23 F -0.172 7.172 24 F -0.177 7.177 25 F -0.167 7.167 26 H 0.078 0.922 27 H 0.086 0.914 28 H 0.096 0.904 29 H 0.116 0.884 30 H 0.124 0.876 31 H 0.124 0.876 32 H 0.271 0.729 33 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.764 14.604 11.403 18.544 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.151 4.151 3 H 0.169 0.831 4 C 0.299 3.701 5 O -0.343 6.343 6 O -0.199 6.199 7 C 0.074 3.926 8 C -0.228 4.228 9 C -0.083 4.083 10 C -0.202 4.202 11 C 0.108 3.892 12 O -0.071 6.071 13 C -0.469 4.469 14 H 0.109 0.891 15 C -0.163 4.163 16 N -0.492 5.492 17 Si 0.765 3.235 18 H -0.190 1.190 19 H -0.200 1.200 20 H -0.199 1.199 21 C -0.247 4.247 22 C 0.416 3.584 23 F -0.153 7.153 24 F -0.158 7.158 25 F -0.149 7.149 26 H 0.097 0.903 27 H 0.105 0.895 28 H 0.115 0.885 29 H 0.134 0.866 30 H 0.142 0.858 31 H 0.142 0.858 32 H 0.081 0.919 33 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -0.513 13.845 11.145 17.781 hybrid contribution -0.523 -0.529 0.776 1.076 sum -1.037 13.316 11.921 17.903 Atomic orbital electron populations 1.21898 0.88187 1.05344 1.05629 1.22234 1.02206 1.02738 0.87928 0.83086 1.22911 0.78749 0.83499 0.84892 1.90851 1.33330 1.23677 1.86430 1.84453 1.64358 1.57883 1.13236 1.18200 0.95112 0.92783 0.86490 1.20494 0.99101 1.01883 1.01351 1.20494 0.98326 0.93854 0.95663 1.20363 0.99472 0.96778 1.03577 1.19113 0.91757 0.86993 0.91321 1.84003 1.51729 1.24604 1.46812 1.21369 1.16851 0.97785 1.10885 0.89081 1.25296 0.98542 0.95285 0.97151 1.70043 1.40854 1.12255 1.26062 0.85647 0.79290 0.79393 0.79163 1.19025 1.19961 1.19924 1.21204 1.05454 0.95567 1.02455 1.19737 0.76079 0.78086 0.84491 1.93240 1.29063 1.96343 1.96643 1.93195 1.88552 1.80820 1.53231 1.93252 1.88207 1.36785 1.96615 0.90265 0.89512 0.88497 0.86635 0.85841 0.85751 0.91884 0.84945 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.28 8.88 37.16 0.33 -0.95 16 2 C -0.13 -1.37 2.81 -91.77 -0.26 -1.63 16 3 H 0.15 1.03 8.14 -51.93 -0.42 0.61 16 4 C 0.46 7.21 6.89 36.00 0.25 7.46 16 5 O -0.46 -9.14 14.27 -18.74 -0.27 -9.41 16 6 O -0.28 -4.71 9.93 -23.62 -0.23 -4.94 16 7 C 0.11 2.24 5.18 -39.24 -0.20 2.04 16 8 C -0.21 -3.67 9.99 -39.38 -0.39 -4.06 16 9 C -0.07 -1.13 10.03 -39.63 -0.40 -1.53 16 10 C -0.18 -3.77 9.99 -39.37 -0.39 -4.16 16 11 C 0.16 3.95 6.65 -39.13 -0.26 3.69 16 12 O -0.17 -4.80 9.76 0.02 0.00 -4.80 16 13 C -0.39 -11.07 9.49 30.88 0.29 -10.78 16 14 H 0.09 2.43 5.20 -52.49 -0.27 2.16 16 15 C 0.04 1.17 5.49 -17.52 -0.10 1.07 16 16 N -0.86 -25.02 13.67 55.48 0.76 -24.26 16 17 Si 0.94 20.75 29.55 -169.99 -5.02 15.73 16 18 H -0.27 -5.68 7.11 56.52 0.40 -5.27 16 19 H -0.27 -5.84 7.11 56.52 0.40 -5.44 16 20 H -0.27 -5.94 7.11 56.52 0.40 -5.54 16 21 C -0.23 -5.14 8.60 -39.25 -0.34 -5.48 16 22 C 0.47 5.71 2.43 37.16 0.09 5.80 16 23 F -0.17 -2.38 16.40 2.25 0.04 -2.34 16 24 F -0.18 -1.82 16.80 2.25 0.04 -1.78 16 25 F -0.17 -2.45 15.88 2.25 0.04 -2.41 16 26 H 0.08 0.76 7.80 -51.93 -0.41 0.36 16 27 H 0.09 0.52 7.80 -51.93 -0.41 0.11 16 28 H 0.10 0.73 8.11 -51.93 -0.42 0.31 16 29 H 0.12 1.68 8.06 -52.49 -0.42 1.26 16 30 H 0.12 1.67 8.06 -52.48 -0.42 1.24 16 31 H 0.12 2.41 8.06 -52.49 -0.42 1.98 16 32 H 0.27 7.22 8.31 -40.82 -0.34 6.88 16 33 H 0.13 3.09 5.64 -52.49 -0.30 2.80 16 LS Contribution 309.18 15.07 4.66 4.66 Total: -1.00 -32.63 309.18 -4.00 -36.63 By element: Atomic # 1 Polarization: 4.09 SS G_CDS: -2.63 Total: 1.46 kcal Atomic # 6 Polarization: -7.15 SS G_CDS: -1.38 Total: -8.53 kcal Atomic # 7 Polarization: -25.02 SS G_CDS: 0.76 Total: -24.26 kcal Atomic # 8 Polarization: -18.65 SS G_CDS: -0.50 Total: -19.15 kcal Atomic # 9 Polarization: -6.65 SS G_CDS: 0.11 Total: -6.54 kcal Atomic # 14 Polarization: 20.75 SS G_CDS: -5.02 Total: 15.73 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -32.63 -4.00 -36.63 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000841345679.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -192.227 kcal (2) G-P(sol) polarization free energy of solvation -32.626 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -224.853 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.001 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.627 kcal (6) G-S(sol) free energy of system = (1) + (5) -228.854 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds