Wall clock time and date at job start Tue Mar 31 2020 09:00:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.08994 * 109.68851 * 2 1 4 4 C 1.53327 * 109.71669 * 239.45475 * 2 1 3 5 5 C 1.52738 * 108.38398 * 170.35598 * 4 2 1 6 6 C 1.50625 * 110.59220 * 51.01562 * 5 4 2 7 7 C 1.39135 * 117.75015 * 162.55845 * 6 5 4 8 8 F 1.35105 * 119.75643 * 359.75077 * 7 6 5 9 9 C 1.38160 * 120.49398 * 179.75183 * 7 6 5 10 10 C 1.38233 * 119.74258 * 359.97438 * 9 7 6 11 11 C 1.37944 * 119.79470 * 0.11931 * 10 9 7 12 12 C 1.37627 * 122.58912 * 342.49244 * 6 5 4 13 13 C 1.50639 * 122.56111 * 0.39718 * 12 6 5 14 14 H 1.09004 * 109.22093 * 102.65791 * 13 12 6 15 15 N 1.46499 * 109.25762 * 222.10897 * 13 12 6 16 16 C 1.34777 * 119.99673 * 276.09659 * 15 13 12 17 17 O 1.21278 * 120.00348 * 359.97438 * 16 15 13 18 18 C 1.50703 * 119.99618 * 179.97438 * 16 15 13 19 19 C 1.52999 * 109.47244 * 179.97438 * 18 16 15 20 20 C 1.50695 * 109.47057 * 180.02562 * 19 18 16 21 21 H 1.07999 * 120.00538 * 359.97438 * 20 19 18 22 22 C 1.37881 * 119.99661 * 179.97438 * 20 19 18 23 23 N 1.31520 * 120.00186 * 359.97438 * 22 20 19 24 24 Si 1.86798 * 120.00030 * 179.97438 * 22 20 19 25 25 H 1.48506 * 109.47297 * 89.99863 * 24 22 20 26 26 H 1.48503 * 109.47261 * 330.00044 * 24 22 20 27 27 H 1.48500 * 109.47454 * 210.00037 * 24 22 20 28 28 H 1.08997 * 109.46832 * 299.47020 * 1 2 3 29 29 H 1.08997 * 109.47097 * 59.47521 * 1 2 3 30 30 H 1.08999 * 109.46961 * 179.47393 * 1 2 3 31 31 H 1.09005 * 109.68800 * 290.07623 * 4 2 1 32 32 H 1.09002 * 109.68598 * 50.59558 * 4 2 1 33 33 H 1.09000 * 109.25325 * 171.30423 * 5 4 2 34 34 H 1.09000 * 109.24769 * 290.73245 * 5 4 2 35 35 H 1.08003 * 120.13382 * 179.97438 * 9 7 6 36 36 H 1.07995 * 120.09901 * 180.09575 * 10 9 7 37 37 H 1.07998 * 119.69458 * 179.97438 * 11 10 9 38 38 H 0.96997 * 119.99740 * 96.08946 * 15 13 12 39 39 H 1.09002 * 109.47387 * 59.99847 * 18 16 15 40 40 H 1.08998 * 109.46985 * 299.99880 * 18 16 15 41 41 H 1.09002 * 109.46997 * 59.99677 * 19 18 16 42 42 H 1.09000 * 109.46625 * 300.00102 * 19 18 16 43 43 H 0.97001 * 119.99697 * 359.97438 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8972 1.0262 0.0000 4 6 2.0473 -0.7336 -1.2431 5 6 3.5549 -0.5099 -1.3418 6 6 4.2264 -0.8410 -0.0348 7 6 5.6016 -1.0517 -0.0481 8 9 6.2828 -0.9603 -1.2113 9 6 6.2759 -1.3538 1.1193 10 6 5.5789 -1.4468 2.3095 11 6 4.2151 -1.2399 2.3230 12 6 3.5339 -0.9384 1.1505 13 6 2.0445 -0.7305 1.2388 14 1 1.5509 -1.6993 1.3158 15 7 1.7374 0.0641 2.4306 16 6 1.6179 -0.5387 3.6301 17 8 1.7641 -1.7391 3.7227 18 6 1.3025 0.2788 4.8562 19 6 1.2217 -0.6414 6.0758 20 6 0.9057 0.1761 7.3017 21 1 0.7759 1.2451 7.2194 22 6 0.7823 -0.4408 8.5287 23 7 0.9399 -1.7427 8.6290 24 14 0.3914 0.5725 10.0484 25 1 -1.0811 0.6577 10.2213 26 1 0.9510 1.9389 9.8898 27 1 0.9934 -0.0734 11.2424 28 1 -0.3633 0.5056 0.8947 29 1 -0.3633 0.5219 -0.8852 30 1 -0.3633 -1.0276 -0.0094 31 1 1.8395 -1.7998 -1.1533 32 1 1.5578 -0.3380 -2.1331 33 1 3.9622 -1.1472 -2.1267 34 1 3.7478 0.5336 -1.5907 35 1 7.3434 -1.5166 1.1023 36 1 6.1004 -1.6810 3.2257 37 1 3.6721 -1.3134 3.2537 38 1 1.6201 1.0241 2.3564 39 1 0.3469 0.7850 4.7195 40 1 2.0871 1.0194 5.0107 41 1 2.1771 -1.1479 6.2127 42 1 0.4369 -1.3817 5.9210 43 1 1.1426 -2.2689 7.8397 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292246141.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 09:00:32 Heat of formation + Delta-G solvation = -87.641837 kcal Electronic energy + Delta-G solvation = -25085.550222 eV Core-core repulsion = 21429.595902 eV Total energy + Delta-G solvation = -3655.954320 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 305.153 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -49.00303 -40.76662 -38.79371 -37.00505 -34.28948 -33.78603 -32.06370 -31.29416 -30.32908 -28.97471 -26.73992 -25.10760 -23.67221 -22.28432 -22.15200 -21.50026 -20.16003 -19.51005 -17.53189 -17.05914 -16.74086 -16.22199 -16.09627 -15.84927 -15.67500 -15.12976 -14.42550 -14.13310 -14.03705 -13.73762 -13.70696 -13.56701 -13.25619 -13.08951 -12.64696 -12.50894 -12.18007 -12.03562 -11.98373 -11.72174 -11.52453 -11.49696 -11.02469 -10.85026 -10.83263 -10.64273 -10.14788 -10.13807 -9.97968 -9.39253 -9.00601 -8.84755 -8.62408 -8.55148 -8.29976 -6.33589 -4.04010 1.07581 1.11273 3.02211 3.28737 3.44082 3.47815 3.60648 3.63445 4.09107 4.26013 4.38356 4.55264 4.57049 4.61772 4.83104 4.89784 5.06529 5.16052 5.22909 5.24915 5.34432 5.44037 5.46367 5.47742 5.57362 5.65105 5.66943 5.75619 5.84130 5.96148 6.00967 6.04111 6.06018 6.07812 6.11869 6.35934 6.40976 6.63639 6.70342 6.85363 7.48337 7.53667 7.71874 8.17330 8.47691 8.58567 8.90342 9.69534 11.07382 Molecular weight = 305.15amu Principal moments of inertia in cm(-1) A = 0.019812 B = 0.003377 C = 0.003005 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1412.973578 B = 8290.424072 C = 9315.144994 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.097 4.097 3 H 0.080 0.920 4 C -0.110 4.110 5 C -0.079 4.079 6 C -0.105 4.105 7 C 0.083 3.917 8 F -0.143 7.143 9 C -0.152 4.152 10 C -0.098 4.098 11 C -0.112 4.112 12 C -0.065 4.065 13 C 0.190 3.810 14 H 0.101 0.899 15 N -0.733 5.733 16 C 0.511 3.489 17 O -0.532 6.532 18 C -0.124 4.124 19 C 0.025 3.975 20 C -0.609 4.609 21 H 0.049 0.951 22 C 0.016 3.984 23 N -0.911 5.911 24 Si 1.072 2.928 25 H -0.288 1.288 26 H -0.289 1.289 27 H -0.284 1.284 28 H 0.061 0.939 29 H 0.058 0.942 30 H 0.058 0.942 31 H 0.070 0.930 32 H 0.076 0.924 33 H 0.077 0.923 34 H 0.078 0.922 35 H 0.132 0.868 36 H 0.133 0.867 37 H 0.145 0.855 38 H 0.400 0.600 39 H 0.082 0.918 40 H 0.082 0.918 41 H 0.014 0.986 42 H 0.015 0.985 43 H 0.272 0.728 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.167 5.054 -22.073 23.226 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.116 4.116 3 H 0.098 0.902 4 C -0.148 4.148 5 C -0.116 4.116 6 C -0.107 4.107 7 C 0.064 3.936 8 F -0.122 7.122 9 C -0.171 4.171 10 C -0.116 4.116 11 C -0.130 4.130 12 C -0.067 4.067 13 C 0.085 3.915 14 H 0.119 0.881 15 N -0.386 5.386 16 C 0.300 3.700 17 O -0.409 6.409 18 C -0.164 4.164 19 C -0.013 4.013 20 C -0.647 4.647 21 H 0.068 0.932 22 C -0.189 4.189 23 N -0.547 5.547 24 Si 0.900 3.100 25 H -0.215 1.215 26 H -0.215 1.215 27 H -0.210 1.210 28 H 0.080 0.920 29 H 0.077 0.923 30 H 0.077 0.923 31 H 0.089 0.911 32 H 0.094 0.906 33 H 0.096 0.904 34 H 0.097 0.903 35 H 0.150 0.850 36 H 0.150 0.850 37 H 0.162 0.838 38 H 0.234 0.766 39 H 0.100 0.900 40 H 0.100 0.900 41 H 0.033 0.967 42 H 0.033 0.967 43 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 5.025 4.074 -20.393 21.394 hybrid contribution 0.562 0.575 -1.888 2.052 sum 5.587 4.649 -22.280 23.436 Atomic orbital electron populations 1.21820 0.93934 1.02483 1.02156 1.21396 0.96510 0.99947 0.93713 0.90194 1.21585 0.94424 1.01270 0.97513 1.20401 0.95298 1.02240 0.93667 1.19566 0.91632 1.03383 0.96104 1.17638 0.89759 1.04543 0.81626 1.91455 1.79820 1.94000 1.46890 1.21088 1.00739 1.03411 0.91814 1.21029 0.94359 0.98686 0.97489 1.21849 0.94526 0.96997 0.99640 1.19896 0.96048 0.98861 0.91885 1.19687 0.89970 0.96790 0.85040 0.88149 1.46293 1.73995 1.11219 1.07106 1.21593 0.74684 0.89112 0.84616 1.90665 1.49055 1.15322 1.85818 1.21753 1.02220 0.99768 0.92687 1.19013 0.97271 0.94377 0.90596 1.22051 1.53613 0.95096 0.93970 0.93248 1.25838 0.94386 0.97274 1.01383 1.70714 1.44339 1.05832 1.33780 0.83511 0.76556 0.74491 0.75415 1.21483 1.21512 1.20995 0.92004 0.92267 0.92322 0.91095 0.90563 0.90409 0.90342 0.84967 0.84952 0.83782 0.76591 0.89969 0.90004 0.96749 0.96703 0.91711 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.22 9.11 37.16 0.34 -0.88 16 2 C -0.10 -0.86 2.24 -90.59 -0.20 -1.06 16 3 H 0.08 0.66 8.10 -51.93 -0.42 0.24 16 4 C -0.11 -0.88 5.29 -26.70 -0.14 -1.02 16 5 C -0.08 -0.72 5.34 -28.05 -0.15 -0.87 16 6 C -0.11 -1.26 5.74 -104.55 -0.60 -1.86 16 7 C 0.08 1.03 7.22 -39.28 -0.28 0.75 16 8 F -0.14 -1.74 16.47 2.25 0.04 -1.70 16 9 C -0.15 -1.82 10.02 -39.61 -0.40 -2.21 16 10 C -0.10 -1.28 10.05 -39.69 -0.40 -1.68 16 11 C -0.11 -1.67 8.99 -39.44 -0.35 -2.03 16 12 C -0.07 -0.86 5.55 -104.62 -0.58 -1.45 16 13 C 0.19 2.32 1.97 -69.25 -0.14 2.19 16 14 H 0.10 1.43 7.56 -51.93 -0.39 1.04 16 15 N -0.73 -9.56 4.47 -55.09 -0.25 -9.81 16 16 C 0.51 9.06 6.34 -10.98 -0.07 8.99 16 17 O -0.53 -11.43 13.73 5.56 0.08 -11.36 16 18 C -0.12 -2.42 5.64 -27.88 -0.16 -2.58 16 19 C 0.02 0.65 3.57 -27.89 -0.10 0.55 16 20 C -0.61 -17.21 9.11 -34.44 -0.31 -17.53 16 21 H 0.05 1.34 7.74 -52.49 -0.41 0.93 16 22 C 0.02 0.45 5.46 -17.82 -0.10 0.36 16 23 N -0.91 -28.46 13.65 55.43 0.76 -27.70 16 24 Si 1.07 25.26 29.90 -169.99 -5.08 20.17 16 25 H -0.29 -6.53 7.11 56.52 0.40 -6.13 16 26 H -0.29 -6.40 7.11 56.52 0.40 -6.00 16 27 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 28 H 0.06 0.55 7.88 -51.93 -0.41 0.14 16 29 H 0.06 0.40 8.14 -51.93 -0.42 -0.02 16 30 H 0.06 0.52 8.14 -51.93 -0.42 0.10 16 31 H 0.07 0.60 8.10 -51.93 -0.42 0.18 16 32 H 0.08 0.47 8.13 -51.93 -0.42 0.05 16 33 H 0.08 0.68 7.86 -51.93 -0.41 0.27 16 34 H 0.08 0.65 8.14 -51.93 -0.42 0.22 16 35 H 0.13 1.29 8.06 -52.48 -0.42 0.87 16 36 H 0.13 1.54 8.06 -52.49 -0.42 1.11 16 37 H 0.14 2.53 4.37 -52.49 -0.23 2.30 16 38 H 0.40 4.14 8.59 -40.82 -0.35 3.79 16 39 H 0.08 1.48 8.14 -51.93 -0.42 1.06 16 40 H 0.08 1.48 8.14 -51.93 -0.42 1.06 16 41 H 0.01 0.40 7.97 -51.93 -0.41 -0.01 16 42 H 0.01 0.42 7.96 -51.93 -0.41 0.00 16 43 H 0.27 8.62 7.22 -40.82 -0.29 8.32 16 LS Contribution 349.47 15.07 5.27 5.27 Total: -1.00 -33.05 349.47 -9.17 -42.23 By element: Atomic # 1 Polarization: 9.57 SS G_CDS: -6.34 Total: 3.23 kcal Atomic # 6 Polarization: -16.68 SS G_CDS: -3.64 Total: -20.33 kcal Atomic # 7 Polarization: -38.02 SS G_CDS: 0.51 Total: -37.51 kcal Atomic # 8 Polarization: -11.43 SS G_CDS: 0.08 Total: -11.36 kcal Atomic # 9 Polarization: -1.74 SS G_CDS: 0.04 Total: -1.70 kcal Atomic # 14 Polarization: 25.26 SS G_CDS: -5.08 Total: 20.17 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -33.05 -9.17 -42.23 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292246141.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.417 kcal (2) G-P(sol) polarization free energy of solvation -33.052 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.469 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.173 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.225 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.642 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds