Wall clock time and date at job start Tue Mar 31 2020 09:01:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 N 1.46505 * 109.47217 * 2 1 4 4 C 1.34771 * 120.00243 * 99.09612 * 3 2 1 5 5 O 1.21585 * 120.00381 * 182.55326 * 4 3 2 6 6 C 1.47536 * 119.99902 * 2.55094 * 4 3 2 7 7 C 1.39664 * 120.19924 * 330.72921 * 6 4 3 8 8 C 1.37834 * 119.92111 * 179.97438 * 7 6 4 9 9 C 1.38576 * 120.32090 * 359.97438 * 8 7 6 10 10 C 1.38019 * 120.40406 * 0.02562 * 9 8 7 11 11 C 1.38832 * 120.07114 * 359.97438 * 10 9 8 12 12 O 1.35520 * 120.16165 * 180.02562 * 11 10 9 13 13 C 1.34813 * 117.00048 * 5.81935 * 12 11 10 14 14 H 1.08003 * 120.00006 * 4.69682 * 13 12 11 15 15 C 1.38701 * 120.00272 * 184.68916 * 13 12 11 16 16 N 1.31521 * 119.99958 * 0.02562 * 15 13 12 17 17 Si 1.86800 * 119.99979 * 179.97438 * 15 13 12 18 18 H 1.48501 * 109.47194 * 0.02562 * 17 15 13 19 19 H 1.48502 * 109.46917 * 120.00351 * 17 15 13 20 20 H 1.48495 * 109.46956 * 240.00156 * 17 15 13 21 21 C 1.46502 * 119.99668 * 279.09756 * 3 2 1 22 22 H 1.08998 * 109.46964 * 179.97438 * 21 3 2 23 23 C 1.52999 * 109.47099 * 299.99691 * 21 3 2 24 24 C 1.53001 * 109.47126 * 60.00309 * 21 3 2 25 25 C 1.52991 * 109.47428 * 59.99708 * 24 21 3 26 26 C 1.52998 * 109.47000 * 179.97438 * 24 21 3 27 27 H 1.09005 * 109.47242 * 300.00242 * 1 2 3 28 28 H 1.09000 * 109.47448 * 59.99740 * 1 2 3 29 29 H 1.09001 * 109.47175 * 180.02562 * 1 2 3 30 30 H 1.08999 * 109.46843 * 239.99874 * 2 1 3 31 31 H 1.09006 * 109.46901 * 119.99840 * 2 1 3 32 32 H 1.07997 * 120.04114 * 359.97438 * 7 6 4 33 33 H 1.07999 * 119.83517 * 180.02562 * 8 7 6 34 34 H 1.07998 * 119.79235 * 180.27859 * 9 8 7 35 35 H 1.07994 * 119.96418 * 180.02562 * 10 9 8 36 36 H 0.96998 * 119.99751 * 179.97438 * 16 15 13 37 37 H 1.09008 * 109.46519 * 60.00504 * 23 21 3 38 38 H 1.09003 * 109.46857 * 179.97438 * 23 21 3 39 39 H 1.08998 * 109.47505 * 300.00537 * 23 21 3 40 40 H 1.08998 * 109.46894 * 299.99669 * 24 21 3 41 41 H 1.08998 * 109.47297 * 179.97438 * 25 24 21 42 42 H 1.09007 * 109.47195 * 300.00011 * 25 24 21 43 43 H 1.08998 * 109.47114 * 60.00097 * 25 24 21 44 44 H 1.09005 * 109.47305 * 59.99854 * 26 24 21 45 45 H 1.09006 * 109.47373 * 179.97438 * 26 24 21 46 46 H 1.08998 * 109.47192 * 300.00240 * 26 24 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3813 0.0000 4 6 2.4170 1.9551 1.1524 5 8 2.7784 3.1160 1.1604 6 6 2.4147 1.1747 2.4045 7 6 1.4986 0.1357 2.5830 8 6 1.5020 -0.5901 3.7548 9 6 2.4110 -0.2946 4.7582 10 6 3.3221 0.7293 4.5959 11 6 3.3334 1.4710 3.4223 12 8 4.2277 2.4764 3.2607 13 6 5.1579 2.6288 4.2245 14 1 5.2146 1.9199 5.0373 15 6 6.0422 3.6961 4.1723 16 7 5.9729 4.5597 3.1828 17 14 7.3306 3.9077 5.5082 18 1 7.1993 2.8110 6.5008 19 1 8.6850 3.8654 4.9007 20 1 7.1322 5.2147 6.1847 21 6 2.0734 2.1387 -1.2528 22 1 2.4599 3.1387 -1.0561 23 6 2.9936 1.4213 -2.2425 24 6 0.6676 2.2437 -1.8474 25 6 -0.2525 2.9611 -0.8578 26 6 0.7250 3.0353 -3.1555 27 1 -0.3634 0.5139 0.8900 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 1.8933 -0.5139 -0.8900 31 1 1.8933 -0.5138 0.8901 32 1 0.7885 -0.0988 1.8039 33 1 0.7932 -1.3935 3.8913 34 1 2.4090 -0.8716 5.6710 35 1 4.0276 0.9532 5.3822 36 1 6.5911 5.3063 3.1465 37 1 2.6066 0.4214 -2.4391 38 1 3.0341 1.9846 -3.1748 39 1 3.9951 1.3464 -1.8188 40 1 0.2807 1.2438 -2.0441 41 1 -1.2539 3.0363 -1.2816 42 1 -0.2935 2.3975 0.0744 43 1 0.1344 3.9609 -0.6612 44 1 1.3806 2.5245 -3.8608 45 1 -0.2765 3.1097 -3.5794 46 1 1.1118 4.0351 -2.9585 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000194983182.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 09:01:53 Heat of formation + Delta-G solvation = -8.584220 kcal Electronic energy + Delta-G solvation = -26573.307807 eV Core-core repulsion = 23044.241988 eV Total energy + Delta-G solvation = -3529.065819 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 305.178 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -40.28420 -38.66564 -36.66375 -36.45895 -34.34433 -32.32308 -31.51439 -30.14271 -29.25284 -28.68865 -26.96275 -25.38738 -23.85874 -23.32246 -22.17184 -21.51289 -19.85027 -19.03521 -18.06260 -17.02169 -16.51906 -15.91658 -15.03637 -14.84155 -14.52019 -14.37876 -14.26321 -13.94385 -13.79044 -13.56807 -13.23237 -13.07125 -12.63212 -12.54992 -12.32830 -12.16264 -12.08032 -11.96075 -11.71175 -11.66943 -11.43450 -11.19535 -11.07437 -10.96925 -10.85497 -10.71748 -10.58559 -10.47804 -10.28740 -10.12938 -9.54185 -8.86530 -8.80479 -8.15424 -8.13918 -7.28093 -6.43450 -4.03442 1.78789 2.32972 3.12528 3.13105 3.19049 3.47436 3.70962 3.94627 4.58077 4.75418 4.96074 5.03212 5.10416 5.16057 5.17390 5.26793 5.34570 5.50804 5.52425 5.54816 5.57642 5.63389 5.72109 5.74896 5.86328 5.89641 5.89989 5.94385 6.00862 6.02445 6.10814 6.16788 6.20673 6.30210 6.38484 6.44769 6.59433 6.60565 6.72330 6.96004 7.07887 7.13085 7.28776 7.31667 7.72789 7.92920 8.05564 8.97051 9.09090 9.69101 10.71195 Molecular weight = 305.18amu Principal moments of inertia in cm(-1) A = 0.015193 B = 0.004951 C = 0.003999 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1842.487517 B = 5653.987231 C = 7000.471528 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C 0.082 3.918 3 N -0.611 5.611 4 C 0.564 3.436 5 O -0.508 6.508 6 C -0.223 4.223 7 C -0.072 4.072 8 C -0.232 4.232 9 C -0.053 4.053 10 C -0.238 4.238 11 C 0.190 3.810 12 O -0.135 6.135 13 C -0.402 4.402 14 H 0.094 0.906 15 C 0.044 3.956 16 N -0.837 5.837 17 Si 0.941 3.059 18 H -0.266 1.266 19 H -0.275 1.275 20 H -0.275 1.275 21 C 0.143 3.857 22 H 0.100 0.900 23 C -0.162 4.162 24 C -0.109 4.109 25 C -0.149 4.149 26 C -0.147 4.147 27 H 0.067 0.933 28 H 0.076 0.924 29 H 0.063 0.937 30 H 0.068 0.932 31 H 0.106 0.894 32 H 0.147 0.853 33 H 0.109 0.891 34 H 0.109 0.891 35 H 0.131 0.869 36 H 0.271 0.729 37 H 0.054 0.946 38 H 0.065 0.935 39 H 0.060 0.940 40 H 0.078 0.922 41 H 0.048 0.952 42 H 0.062 0.938 43 H 0.055 0.945 44 H 0.057 0.943 45 H 0.052 0.948 46 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.020 -9.394 -8.095 15.943 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.252 4.252 2 C -0.041 4.041 3 N -0.346 5.346 4 C 0.355 3.645 5 O -0.382 6.382 6 C -0.227 4.227 7 C -0.090 4.090 8 C -0.251 4.251 9 C -0.071 4.071 10 C -0.258 4.258 11 C 0.131 3.869 12 O -0.034 6.034 13 C -0.478 4.478 14 H 0.111 0.889 15 C -0.163 4.163 16 N -0.469 5.469 17 Si 0.765 3.235 18 H -0.190 1.190 19 H -0.201 1.201 20 H -0.200 1.200 21 C 0.039 3.961 22 H 0.118 0.882 23 C -0.220 4.220 24 C -0.128 4.128 25 C -0.206 4.206 26 C -0.205 4.205 27 H 0.085 0.915 28 H 0.095 0.905 29 H 0.081 0.919 30 H 0.086 0.914 31 H 0.124 0.876 32 H 0.164 0.836 33 H 0.127 0.873 34 H 0.127 0.873 35 H 0.148 0.852 36 H 0.081 0.919 37 H 0.073 0.927 38 H 0.084 0.916 39 H 0.079 0.921 40 H 0.096 0.904 41 H 0.067 0.933 42 H 0.081 0.919 43 H 0.074 0.926 44 H 0.076 0.924 45 H 0.072 0.928 46 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -9.607 -8.304 -8.341 15.193 hybrid contribution 0.606 -0.061 0.822 1.023 sum -9.001 -8.366 -7.519 14.406 Atomic orbital electron populations 1.22792 0.96817 1.02201 1.03423 1.22126 0.93759 0.84125 1.04131 1.47783 1.66381 1.13411 1.07056 1.18255 0.76634 0.86732 0.82902 1.90861 1.45465 1.16408 1.85457 1.18806 1.04508 1.03852 0.95570 1.21886 0.96952 0.92671 0.97498 1.20515 1.04040 1.04720 0.95812 1.20907 0.93584 0.95149 0.97508 1.21136 1.04519 1.00876 0.99234 1.19269 0.88300 0.87889 0.91460 1.84121 1.34627 1.40795 1.43848 1.21499 1.09081 1.12158 1.05017 0.88884 1.25373 0.98279 0.94674 0.98023 1.70124 1.35260 1.12408 1.29127 0.85662 0.79499 0.78818 0.79520 1.18987 1.20052 1.20016 1.20980 0.94295 0.97456 0.83363 0.88176 1.22186 1.00217 1.00466 0.99162 1.21662 0.95897 0.99817 0.95385 1.21903 0.98122 1.01148 0.99430 1.21883 1.01424 1.00508 0.96655 0.91458 0.90516 0.91855 0.91410 0.87618 0.83630 0.87339 0.87321 0.85166 0.91940 0.92672 0.91589 0.92136 0.90444 0.93334 0.91928 0.92550 0.92416 0.92848 0.92461 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -2.05 7.46 37.16 0.28 -1.77 16 2 C 0.08 1.06 5.25 -4.04 -0.02 1.04 16 3 N -0.61 -10.26 1.76 -167.32 -0.30 -10.56 16 4 C 0.56 12.61 7.38 -12.47 -0.09 12.52 16 5 O -0.51 -13.92 15.06 -14.01 -0.21 -14.13 16 6 C -0.22 -4.92 5.54 -104.81 -0.58 -5.50 16 7 C -0.07 -1.26 7.43 -39.20 -0.29 -1.55 16 8 C -0.23 -3.84 10.03 -39.60 -0.40 -4.23 16 9 C -0.05 -0.95 10.03 -39.54 -0.40 -1.34 16 10 C -0.24 -5.21 9.13 -39.44 -0.36 -5.57 16 11 C 0.19 4.78 6.63 -38.60 -0.26 4.52 16 12 O -0.13 -4.03 8.24 -18.50 -0.15 -4.18 16 13 C -0.40 -11.49 9.45 30.90 0.29 -11.20 16 14 H 0.09 2.43 5.29 -52.48 -0.28 2.15 16 15 C 0.04 1.23 5.49 -17.51 -0.10 1.13 16 16 N -0.84 -25.48 13.67 55.48 0.76 -24.72 16 17 Si 0.94 20.75 29.55 -169.99 -5.02 15.72 16 18 H -0.27 -5.56 7.11 56.52 0.40 -5.16 16 19 H -0.28 -5.93 7.11 56.52 0.40 -5.53 16 20 H -0.27 -5.94 7.11 56.52 0.40 -5.54 16 21 C 0.14 2.15 2.23 -67.93 -0.15 2.00 16 22 H 0.10 1.86 6.90 -51.93 -0.36 1.50 16 23 C -0.16 -2.08 8.79 37.16 0.33 -1.75 16 24 C -0.11 -1.29 1.91 -90.62 -0.17 -1.46 16 25 C -0.15 -1.95 8.28 37.15 0.31 -1.64 16 26 C -0.15 -1.51 8.84 37.16 0.33 -1.18 16 27 H 0.07 0.79 6.12 -51.93 -0.32 0.48 16 28 H 0.08 0.77 4.01 -51.93 -0.21 0.56 16 29 H 0.06 0.52 8.14 -51.93 -0.42 0.10 16 30 H 0.07 0.75 6.50 -51.93 -0.34 0.42 16 31 H 0.11 1.48 4.32 -51.93 -0.22 1.26 16 32 H 0.15 2.06 2.35 -52.49 -0.12 1.94 16 33 H 0.11 1.44 8.06 -52.49 -0.42 1.02 16 34 H 0.11 1.60 8.06 -52.49 -0.42 1.18 16 35 H 0.13 2.82 5.71 -52.49 -0.30 2.52 16 36 H 0.27 7.50 8.31 -40.82 -0.34 7.16 16 37 H 0.05 0.60 6.74 -51.92 -0.35 0.25 16 38 H 0.07 0.72 6.43 -51.93 -0.33 0.39 16 39 H 0.06 0.89 8.14 -51.93 -0.42 0.47 16 40 H 0.08 0.82 5.45 -51.93 -0.28 0.54 16 41 H 0.05 0.53 8.14 -51.93 -0.42 0.11 16 42 H 0.06 0.90 5.48 -51.92 -0.28 0.61 16 43 H 0.06 0.84 8.14 -51.93 -0.42 0.42 16 44 H 0.06 0.53 6.43 -51.93 -0.33 0.20 16 45 H 0.05 0.48 8.14 -51.93 -0.42 0.06 16 46 H 0.06 0.63 8.14 -51.93 -0.42 0.21 16 LS Contribution 348.46 15.07 5.25 5.25 Total: -1.00 -34.10 348.46 -7.20 -41.30 By element: Atomic # 1 Polarization: 13.55 SS G_CDS: -6.25 Total: 7.30 kcal Atomic # 6 Polarization: -14.70 SS G_CDS: -1.28 Total: -15.99 kcal Atomic # 7 Polarization: -35.74 SS G_CDS: 0.46 Total: -35.28 kcal Atomic # 8 Polarization: -17.95 SS G_CDS: -0.36 Total: -18.31 kcal Atomic # 14 Polarization: 20.75 SS G_CDS: -5.02 Total: 15.72 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -34.10 -7.20 -41.30 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000194983182.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.715 kcal (2) G-P(sol) polarization free energy of solvation -34.096 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.381 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.203 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.300 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.584 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds