Wall clock time and date at job start Tue Mar 31 2020 11:02:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35983 * 117.00195 * 2 1 4 4 C 1.38695 * 119.99718 * 179.97438 * 3 2 1 5 5 C 1.38138 * 119.99779 * 180.02562 * 4 3 2 6 6 C 1.38697 * 119.99995 * 0.02562 * 5 4 3 7 7 O 1.35979 * 120.00180 * 179.97438 * 6 5 4 8 8 C 1.42899 * 117.00041 * 180.02562 * 7 6 5 9 9 C 1.53006 * 109.47131 * 180.02562 * 8 7 6 10 10 N 1.46898 * 109.47124 * 65.01768 * 9 8 7 11 11 C 1.46845 * 111.00184 * 200.01512 * 10 9 8 12 12 C 1.53032 * 109.52508 * 174.16420 * 11 10 9 13 13 C 1.53118 * 109.28137 * 59.17883 * 12 11 10 14 14 C 1.50709 * 109.57630 * 182.41002 * 13 12 11 15 15 H 1.08000 * 119.99637 * 119.71281 * 14 13 12 16 16 C 1.37868 * 119.99649 * 299.71699 * 14 13 12 17 17 N 1.31511 * 120.00695 * 359.97438 * 16 14 13 18 18 Si 1.86805 * 119.99645 * 179.97438 * 16 14 13 19 19 H 1.48507 * 109.47109 * 89.99638 * 18 16 14 20 20 H 1.48499 * 109.46978 * 209.99777 * 18 16 14 21 21 H 1.48501 * 109.46969 * 329.99837 * 18 16 14 22 22 C 1.53123 * 109.15988 * 302.34712 * 13 12 11 23 23 C 1.46853 * 110.99746 * 75.80457 * 10 9 8 24 24 C 1.38702 * 120.00025 * 0.25394 * 6 5 4 25 25 C 1.38136 * 119.99413 * 359.49181 * 24 6 5 26 26 H 1.09000 * 109.47282 * 59.99816 * 1 2 3 27 27 H 1.09002 * 109.47250 * 180.02562 * 1 2 3 28 28 H 1.09009 * 109.46934 * 299.99746 * 1 2 3 29 29 H 1.07995 * 120.00705 * 0.02562 * 4 3 2 30 30 H 1.07998 * 120.00199 * 179.97438 * 5 4 3 31 31 H 1.09004 * 109.46807 * 299.99870 * 8 7 6 32 32 H 1.08998 * 109.47753 * 60.00135 * 8 7 6 33 33 H 1.08998 * 109.47148 * 185.02066 * 9 8 7 34 34 H 1.08998 * 109.46969 * 305.02077 * 9 8 7 35 35 H 1.09004 * 109.46005 * 294.17711 * 11 10 9 36 36 H 1.08999 * 109.45873 * 54.14357 * 11 10 9 37 37 H 1.09007 * 109.50228 * 299.23638 * 12 11 10 38 38 H 1.09002 * 109.50335 * 179.12195 * 12 11 10 39 39 H 1.08998 * 109.52136 * 62.25245 * 13 12 11 40 40 H 0.96999 * 120.00213 * 180.02562 * 17 16 14 41 41 H 1.08998 * 109.50199 * 297.71113 * 22 13 12 42 42 H 1.08993 * 109.53386 * 177.61580 * 22 13 12 43 43 H 1.08999 * 109.46305 * 305.85550 * 23 10 9 44 44 H 1.08998 * 109.46031 * 65.83820 * 23 10 9 45 45 H 1.08000 * 120.00510 * 179.72208 * 24 6 5 46 46 H 1.08005 * 119.99419 * 180.22980 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4314 1.2841 0.0005 5 6 4.0586 2.5149 0.0011 6 6 3.3032 3.6781 0.0016 7 8 3.9206 4.8897 0.0027 8 6 3.0807 6.0458 0.0037 9 6 3.9480 7.3063 0.0042 10 7 4.7069 7.3789 -1.2515 11 6 5.8684 8.2668 -1.1138 12 6 6.7132 8.2051 -2.3883 13 6 5.8577 8.6348 -3.5833 14 6 6.6658 8.5200 -4.8502 15 1 6.3373 7.8638 -5.6425 16 6 7.8243 9.2527 -4.9975 17 7 8.2241 10.0522 -4.0328 18 14 8.8264 9.1099 -6.5676 19 1 8.3565 10.1211 -7.5484 20 1 10.2606 9.3451 -6.2625 21 1 8.6586 7.7499 -7.1399 22 6 4.6297 7.7247 -3.6753 23 6 3.8452 7.8003 -2.3635 24 6 1.9181 3.6056 0.0069 25 6 1.2910 2.3748 0.0011 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3634 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8901 29 1 4.0196 0.3784 0.0005 30 1 5.1371 2.5714 0.0019 31 1 2.4514 6.0385 -0.8863 32 1 2.4514 6.0370 0.8937 33 1 3.3106 8.1858 0.0949 34 1 4.6401 7.2708 0.8455 35 1 5.5268 9.2894 -0.9536 36 1 6.4705 7.9477 -0.2631 37 1 7.0666 7.1854 -2.5417 38 1 7.5668 8.8761 -2.2919 39 1 5.5363 9.6676 -3.4485 40 1 9.0390 10.5679 -4.1367 41 1 4.9503 6.6975 -3.8490 42 1 3.9946 8.0518 -4.4985 43 1 2.9780 7.1424 -2.4205 44 1 3.5134 8.8252 -2.1976 45 1 1.3299 4.5113 0.0119 46 1 0.2125 2.3183 0.0015 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260447977.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:02:06 Heat of formation + Delta-G solvation = -50.929001 kcal Electronic energy + Delta-G solvation = -24733.351195 eV Core-core repulsion = 21202.449168 eV Total energy + Delta-G solvation = -3530.902027 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 305.178 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -40.46428 -39.15570 -38.09920 -36.36260 -34.03455 -31.72171 -31.28197 -30.04605 -29.55492 -28.42984 -27.22044 -25.51136 -23.50514 -22.37830 -22.06709 -21.69917 -20.66779 -18.66555 -18.46922 -17.68826 -16.54409 -16.48377 -16.03433 -15.83457 -15.01040 -14.84183 -14.54254 -14.33620 -14.19001 -13.84664 -13.44980 -13.34349 -12.99006 -12.82200 -12.67115 -12.43641 -12.25389 -12.00726 -11.92130 -11.62192 -11.34467 -11.17543 -10.92143 -10.78896 -10.62374 -10.45228 -10.31595 -10.16692 -9.91409 -9.40340 -9.18401 -8.91592 -8.67570 -8.25736 -7.77357 -7.71928 -5.93831 -3.98785 1.14690 1.40822 3.09560 3.33810 3.34039 3.40516 3.44609 3.65441 4.34235 4.48621 4.57572 4.65927 4.83375 4.87485 5.00033 5.06247 5.15181 5.17720 5.29613 5.34468 5.36524 5.40358 5.56531 5.71890 5.77304 5.84180 5.90695 5.98196 6.11396 6.15357 6.22981 6.26727 6.34918 6.49467 6.63518 6.65646 6.88864 7.11265 7.18182 7.20418 7.46088 7.54235 7.64442 7.72756 7.86630 8.09332 8.19730 8.52455 9.04769 9.65429 11.12434 Molecular weight = 305.18amu Principal moments of inertia in cm(-1) A = 0.021353 B = 0.002650 C = 0.002507 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1310.964115 B =10563.712888 C =11167.201325 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.321 6.321 3 C 0.079 3.921 4 C -0.110 4.110 5 C -0.113 4.113 6 C 0.107 3.893 7 O -0.291 6.291 8 C 0.069 3.931 9 C 0.052 3.948 10 N -0.528 5.528 11 C 0.059 3.941 12 C -0.104 4.104 13 C 0.048 3.952 14 C -0.509 4.509 15 H 0.054 0.946 16 C 0.060 3.940 17 N -0.893 5.893 18 Si 0.889 3.111 19 H -0.282 1.282 20 H -0.287 1.287 21 H -0.274 1.274 22 C -0.106 4.106 23 C 0.058 3.942 24 C -0.176 4.176 25 C -0.167 4.167 26 H 0.053 0.947 27 H 0.097 0.903 28 H 0.052 0.948 29 H 0.136 0.864 30 H 0.140 0.860 31 H 0.061 0.939 32 H 0.057 0.943 33 H 0.051 0.949 34 H 0.080 0.920 35 H 0.021 0.979 36 H 0.056 0.944 37 H 0.044 0.956 38 H 0.092 0.908 39 H 0.020 0.980 40 H 0.259 0.741 41 H 0.057 0.943 42 H 0.048 0.952 43 H 0.054 0.946 44 H 0.023 0.977 45 H 0.128 0.872 46 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.215 -13.791 11.854 23.712 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.235 6.235 3 C 0.035 3.965 4 C -0.128 4.128 5 C -0.132 4.132 6 C 0.061 3.939 7 O -0.204 6.204 8 C -0.007 4.007 9 C -0.076 4.076 10 N -0.254 5.254 11 C -0.068 4.068 12 C -0.142 4.142 13 C 0.029 3.971 14 C -0.547 4.547 15 H 0.072 0.928 16 C -0.140 4.140 17 N -0.532 5.532 18 Si 0.717 3.283 19 H -0.209 1.209 20 H -0.213 1.213 21 H -0.199 1.199 22 C -0.143 4.143 23 C -0.069 4.069 24 C -0.195 4.195 25 C -0.186 4.186 26 H 0.072 0.928 27 H 0.115 0.885 28 H 0.071 0.929 29 H 0.153 0.847 30 H 0.157 0.843 31 H 0.079 0.921 32 H 0.075 0.925 33 H 0.069 0.931 34 H 0.098 0.902 35 H 0.040 0.960 36 H 0.075 0.925 37 H 0.063 0.937 38 H 0.110 0.890 39 H 0.038 0.962 40 H 0.069 0.931 41 H 0.076 0.924 42 H 0.067 0.933 43 H 0.073 0.927 44 H 0.042 0.958 45 H 0.146 0.854 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -14.598 -14.259 11.787 23.566 hybrid contribution -0.334 1.044 -0.661 1.280 sum -14.932 -13.215 11.126 22.834 Atomic orbital electron populations 1.22998 0.78828 1.03661 1.01153 1.86058 1.20978 1.26884 1.89564 1.18863 0.92318 0.84079 1.01289 1.20226 0.91257 0.97881 1.03474 1.20305 1.00546 0.88988 1.03371 1.19019 0.90837 0.86359 0.97668 1.86251 1.34965 1.11233 1.87992 1.22876 0.93117 0.84307 1.00407 1.22113 0.97053 0.93776 0.94672 1.61951 1.08472 1.52470 1.02463 1.22281 0.91351 0.92529 1.00612 1.21657 0.99419 1.01151 0.91991 1.18684 0.90745 0.93648 0.93987 1.21208 1.07451 1.24748 1.01287 0.92787 1.24964 0.97516 0.95253 0.96313 1.69873 1.23705 1.27595 1.32037 0.86638 0.79420 0.78378 0.83817 1.20851 1.21297 1.19942 1.21662 0.98103 1.01393 0.93180 1.22182 0.95051 0.96820 0.92864 1.21055 0.93574 0.98247 1.06604 1.20979 0.99749 0.91773 1.06122 0.92822 0.88461 0.92927 0.84661 0.84254 0.92095 0.92451 0.93073 0.90168 0.96050 0.92522 0.93705 0.88963 0.96238 0.93138 0.92434 0.93306 0.92746 0.95847 0.85378 0.85547 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.19 9.81 101.05 0.99 1.18 16 2 O -0.32 -3.39 10.50 -19.69 -0.21 -3.60 16 3 C 0.08 0.91 6.68 -39.25 -0.26 0.64 16 4 C -0.11 -1.26 9.98 -39.45 -0.39 -1.66 16 5 C -0.11 -1.42 9.98 -39.45 -0.39 -1.81 16 6 C 0.11 1.44 6.69 -39.24 -0.26 1.17 16 7 O -0.29 -4.33 10.09 -19.67 -0.20 -4.53 16 8 C 0.07 0.86 4.93 37.16 0.18 1.04 16 9 C 0.05 0.73 5.39 -3.82 -0.02 0.71 16 10 N -0.53 -9.47 4.53 -234.67 -1.06 -10.54 16 11 C 0.06 1.17 5.43 -3.84 -0.02 1.15 16 12 C -0.10 -2.49 5.12 -26.65 -0.14 -2.63 16 13 C 0.05 1.21 2.16 -91.64 -0.20 1.01 16 14 C -0.51 -14.16 8.56 -34.44 -0.29 -14.45 16 15 H 0.05 1.50 7.74 -52.49 -0.41 1.09 16 16 C 0.06 1.68 5.31 -17.82 -0.09 1.59 16 17 N -0.89 -25.63 11.37 55.43 0.63 -24.99 16 18 Si 0.89 21.55 29.54 -169.99 -5.02 16.53 16 19 H -0.28 -6.78 7.11 56.52 0.40 -6.38 16 20 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 21 H -0.27 -6.60 7.11 56.52 0.40 -6.20 16 22 C -0.11 -2.26 5.32 -26.65 -0.14 -2.40 16 23 C 0.06 1.05 5.29 -3.83 -0.02 1.03 16 24 C -0.18 -2.03 9.03 -39.45 -0.36 -2.39 16 25 C -0.17 -1.78 9.03 -39.45 -0.36 -2.14 16 26 H 0.05 0.32 7.66 -51.93 -0.40 -0.08 16 27 H 0.10 0.44 8.14 -51.93 -0.42 0.02 16 28 H 0.05 0.29 7.66 -51.92 -0.40 -0.10 16 29 H 0.14 1.30 8.06 -52.49 -0.42 0.88 16 30 H 0.14 1.62 8.06 -52.49 -0.42 1.20 16 31 H 0.06 0.75 6.23 -51.93 -0.32 0.43 16 32 H 0.06 0.57 7.65 -51.93 -0.40 0.17 16 33 H 0.05 0.64 8.00 -51.93 -0.42 0.22 16 34 H 0.08 1.08 7.79 -51.93 -0.40 0.68 16 35 H 0.02 0.42 8.14 -51.93 -0.42 0.00 16 36 H 0.06 1.04 7.93 -51.93 -0.41 0.63 16 37 H 0.04 1.12 8.14 -51.92 -0.42 0.69 16 38 H 0.09 2.44 6.18 -51.93 -0.32 2.12 16 39 H 0.02 0.53 8.14 -51.93 -0.42 0.11 16 40 H 0.26 7.10 8.31 -40.82 -0.34 6.76 16 41 H 0.06 1.28 8.14 -51.93 -0.42 0.86 16 42 H 0.05 1.01 8.14 -51.93 -0.42 0.58 16 43 H 0.05 0.87 6.65 -51.93 -0.35 0.52 16 44 H 0.02 0.42 8.14 -51.93 -0.42 0.00 16 45 H 0.13 1.26 6.29 -52.49 -0.33 0.93 16 46 H 0.13 1.03 6.29 -52.48 -0.33 0.70 16 LS Contribution 363.56 15.07 5.48 5.48 Total: -1.00 -30.70 363.56 -9.58 -40.28 By element: Atomic # 1 Polarization: 6.74 SS G_CDS: -7.42 Total: -0.68 kcal Atomic # 6 Polarization: -16.17 SS G_CDS: -1.78 Total: -17.95 kcal Atomic # 7 Polarization: -35.10 SS G_CDS: -0.43 Total: -35.53 kcal Atomic # 8 Polarization: -7.73 SS G_CDS: -0.41 Total: -8.13 kcal Atomic # 14 Polarization: 21.55 SS G_CDS: -5.02 Total: 16.53 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -30.70 -9.58 -40.28 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260447977.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.648 kcal (2) G-P(sol) polarization free energy of solvation -30.703 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.350 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.579 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.281 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.929 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds