Wall clock time and date at job start Tue Mar 31 2020 09:20:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.42891 * 109.47163 * 2 1 4 4 C 1.35907 * 117.00171 * 179.97438 * 3 2 1 5 5 C 1.38730 * 120.05695 * 179.97438 * 4 3 2 6 6 C 1.38146 * 119.94275 * 179.97438 * 5 4 3 7 7 C 1.38266 * 120.05758 * 359.97438 * 6 5 4 8 8 C 1.50695 * 119.94641 * 179.97438 * 7 6 5 9 9 H 1.09003 * 109.47186 * 25.00554 * 8 7 6 10 10 O 1.42904 * 109.47142 * 144.99869 * 8 7 6 11 11 C 1.52995 * 109.47466 * 265.00206 * 8 7 6 12 12 C 1.53041 * 109.45966 * 300.07117 * 11 8 7 13 13 C 1.53194 * 109.31317 * 178.61341 * 12 11 8 14 14 N 1.46930 * 108.77646 * 54.63090 * 13 12 11 15 15 C 1.36930 * 120.63064 * 126.41386 * 14 13 12 16 16 H 1.08008 * 120.00387 * 207.67002 * 15 14 13 17 17 C 1.38814 * 120.00401 * 27.66470 * 15 14 13 18 18 N 1.31620 * 119.99387 * 17.36554 * 17 15 14 19 19 Si 1.86798 * 120.00517 * 197.36733 * 17 15 14 20 20 H 1.48497 * 109.47084 * 59.99704 * 19 17 15 21 21 H 1.48498 * 109.47077 * 179.97438 * 19 17 15 22 22 H 1.48497 * 109.46912 * 300.00177 * 19 17 15 23 23 C 1.46924 * 118.73675 * 306.39688 * 14 13 12 24 24 C 1.53039 * 109.46329 * 179.97438 * 11 8 7 25 25 C 1.38273 * 120.10710 * 0.27743 * 7 6 5 26 26 C 1.38144 * 120.05788 * 359.44654 * 25 7 6 27 27 H 1.09000 * 109.47209 * 300.00064 * 1 2 3 28 28 H 1.09003 * 109.47280 * 59.99846 * 1 2 3 29 29 H 1.09001 * 109.47491 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47209 * 239.99936 * 2 1 3 31 31 H 1.09003 * 109.47280 * 120.00154 * 2 1 3 32 32 H 1.08003 * 120.02797 * 359.95972 * 5 4 3 33 33 H 1.08000 * 119.97252 * 180.02562 * 6 5 4 34 34 H 0.96709 * 113.99349 * 60.00625 * 10 8 7 35 35 H 1.09006 * 109.45803 * 60.02743 * 11 8 7 36 36 H 1.09000 * 109.49576 * 298.56271 * 12 11 8 37 37 H 1.08996 * 109.50227 * 58.65736 * 12 11 8 38 38 H 1.09004 * 109.58332 * 294.84901 * 13 12 11 39 39 H 1.08994 * 109.58701 * 174.41800 * 13 12 11 40 40 H 0.96997 * 119.99589 * 179.97438 * 18 17 15 41 41 H 1.09001 * 109.58602 * 293.81413 * 23 14 13 42 42 H 1.09004 * 109.58674 * 173.39684 * 23 14 13 43 43 H 1.09003 * 109.49661 * 301.34130 * 24 11 8 44 44 H 1.09006 * 109.49513 * 61.40173 * 24 11 8 45 45 H 1.08004 * 119.96864 * 179.70493 * 25 7 6 46 46 H 1.07995 * 120.02455 * 180.27622 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 3.3536 1.5253 0.0005 5 6 3.8851 2.8067 0.0000 6 6 5.2550 2.9850 0.0011 7 6 6.0962 1.8877 0.0032 8 6 7.5902 2.0851 0.0038 9 1 7.8281 3.0567 0.4370 10 8 8.2065 1.0545 0.7786 11 6 8.1132 2.0252 -1.4327 12 6 7.7774 0.6617 -2.0411 13 6 8.2718 0.6179 -3.4904 14 7 9.7023 0.9529 -3.5124 15 6 10.6048 0.1191 -4.1167 16 1 11.6302 0.0965 -3.7779 17 6 10.2021 -0.6973 -5.1646 18 7 9.0795 -0.4430 -5.8030 19 14 11.2533 -2.1568 -5.6689 20 1 11.3903 -3.0884 -4.5206 21 1 10.6075 -2.8631 -6.8044 22 1 12.5974 -1.6795 -6.0821 23 6 10.1457 2.1997 -2.8741 24 6 9.6303 2.2264 -1.4318 25 6 5.5689 0.6095 -0.0015 26 6 4.1997 0.4258 0.0032 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5139 0.8900 32 1 3.2284 3.6642 -0.0014 33 1 5.6693 3.9824 0.0012 34 1 8.0369 0.1609 0.4501 35 1 7.6433 2.8118 -2.0233 36 1 8.2673 -0.1239 -1.4657 37 1 6.6983 0.5096 -2.0200 38 1 7.7177 1.3422 -4.0875 39 1 8.1246 -0.3827 -3.8966 40 1 8.7983 -1.0132 -6.5355 41 1 9.7445 3.0530 -3.4210 42 1 11.2349 2.2428 -2.8738 43 1 9.8696 3.1877 -0.9772 44 1 10.1030 1.4266 -0.8616 45 1 6.2280 -0.2461 -0.0046 46 1 3.7884 -0.5727 0.0040 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000291946356.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 09:20:52 Heat of formation + Delta-G solvation = -53.300393 kcal Electronic energy + Delta-G solvation = -25535.093707 eV Core-core repulsion = 22004.088848 eV Total energy + Delta-G solvation = -3531.004858 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 305.178 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -40.42767 -39.06420 -37.15848 -35.82801 -32.98525 -32.20986 -31.14307 -30.84740 -29.73531 -29.50779 -26.30048 -24.29435 -24.19746 -22.29764 -22.01847 -21.53790 -20.51035 -18.94043 -18.44846 -16.96732 -16.66586 -16.28553 -16.02457 -15.34865 -14.83368 -14.69771 -14.27120 -13.84437 -13.67355 -13.57020 -13.46692 -13.45143 -13.01191 -12.84287 -12.64393 -12.53657 -12.17152 -11.89847 -11.88442 -11.41180 -11.28248 -11.02379 -10.83725 -10.82556 -10.67663 -10.64380 -10.29840 -10.19149 -9.95583 -9.82719 -9.42862 -9.27562 -8.94881 -8.43464 -8.06483 -6.63141 -5.75944 -3.17337 1.32618 1.39589 3.04626 3.39583 3.45123 3.46687 3.71352 4.52150 4.63372 4.65128 4.67645 4.76875 4.81654 4.87471 4.97792 5.19362 5.27082 5.29884 5.36517 5.41524 5.47398 5.49522 5.57802 5.64175 5.72579 5.74895 5.88496 6.03785 6.09156 6.17891 6.24112 6.32849 6.40278 6.56855 6.59366 6.63916 6.71339 6.74991 6.84134 6.89027 7.09192 7.32584 7.39562 7.68269 7.79996 7.81985 8.48273 9.24827 9.88871 10.46035 11.32435 Molecular weight = 305.18amu Principal moments of inertia in cm(-1) A = 0.016162 B = 0.003555 C = 0.003120 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1732.050566 B = 7874.488473 C = 8972.053654 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.054 3.946 3 O -0.319 6.319 4 C 0.123 3.877 5 C -0.152 4.152 6 C -0.073 4.073 7 C -0.139 4.139 8 C 0.153 3.847 9 H 0.100 0.900 10 O -0.556 6.556 11 C -0.104 4.104 12 C -0.141 4.141 13 C 0.174 3.826 14 N -0.592 5.592 15 C -0.250 4.250 16 H 0.064 0.936 17 C 0.001 3.999 18 N -0.904 5.904 19 Si 0.902 3.098 20 H -0.284 1.284 21 H -0.291 1.291 22 H -0.283 1.283 23 C 0.144 3.856 24 C -0.122 4.122 25 C -0.065 4.065 26 C -0.205 4.205 27 H 0.065 0.935 28 H 0.066 0.934 29 H 0.077 0.923 30 H 0.063 0.937 31 H 0.061 0.939 32 H 0.128 0.872 33 H 0.129 0.871 34 H 0.372 0.628 35 H 0.070 0.930 36 H 0.052 0.948 37 H 0.053 0.947 38 H 0.015 0.985 39 H 0.086 0.914 40 H 0.253 0.747 41 H 0.015 0.985 42 H 0.052 0.948 43 H 0.048 0.952 44 H 0.064 0.936 45 H 0.124 0.876 46 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.673 3.111 13.416 19.406 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.022 4.022 3 O -0.233 6.233 4 C 0.078 3.922 5 C -0.170 4.170 6 C -0.091 4.091 7 C -0.140 4.140 8 C 0.094 3.906 9 H 0.117 0.883 10 O -0.363 6.363 11 C -0.123 4.123 12 C -0.180 4.180 13 C 0.048 3.952 14 N -0.315 5.315 15 C -0.380 4.380 16 H 0.082 0.918 17 C -0.198 4.198 18 N -0.548 5.548 19 Si 0.731 3.269 20 H -0.211 1.211 21 H -0.217 1.217 22 H -0.209 1.209 23 C 0.018 3.982 24 C -0.161 4.161 25 C -0.083 4.083 26 C -0.224 4.224 27 H 0.084 0.916 28 H 0.085 0.915 29 H 0.096 0.904 30 H 0.081 0.919 31 H 0.079 0.921 32 H 0.146 0.854 33 H 0.147 0.853 34 H 0.221 0.779 35 H 0.088 0.912 36 H 0.071 0.929 37 H 0.071 0.929 38 H 0.033 0.967 39 H 0.104 0.896 40 H 0.063 0.937 41 H 0.032 0.968 42 H 0.071 0.929 43 H 0.066 0.934 44 H 0.083 0.917 45 H 0.142 0.858 46 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -13.682 3.661 13.594 19.631 hybrid contribution 0.253 -1.466 -0.787 1.683 sum -13.429 2.195 12.806 18.686 Atomic orbital electron populations 1.21771 0.92839 1.02814 1.03437 1.22767 0.95762 0.82120 1.01507 1.86041 1.19252 1.29195 1.88851 1.18962 0.82058 0.94207 0.96952 1.20356 0.95107 0.94700 1.06874 1.20763 0.92021 0.98639 0.97713 1.20545 0.97134 0.93454 1.02830 1.20901 0.85918 0.91558 0.92224 0.88264 1.86539 1.75881 1.18004 1.55832 1.21681 0.96990 0.99525 0.94094 1.22341 0.99193 0.95281 1.01180 1.20718 0.83557 1.01393 0.89515 1.44047 1.03584 1.19582 1.64242 1.19159 0.92715 1.15964 1.10171 0.91796 1.25025 0.97875 1.01011 0.95857 1.70034 1.24043 1.38417 1.22351 0.86381 0.79806 0.83008 0.77661 1.21083 1.21686 1.20921 1.20913 0.97392 0.89255 0.90639 1.21971 0.94363 1.00304 0.99437 1.20707 0.94200 0.96886 0.96532 1.21173 0.94240 0.97954 1.09035 0.91632 0.91501 0.90406 0.91895 0.92121 0.85397 0.85344 0.77894 0.91153 0.92932 0.92863 0.96661 0.89597 0.93679 0.96757 0.92940 0.93378 0.91721 0.85825 0.85624 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.02 10.28 37.15 0.38 -0.64 16 2 C 0.05 0.47 5.46 37.15 0.20 0.67 16 3 O -0.32 -3.82 10.14 -19.45 -0.20 -4.02 16 4 C 0.12 1.58 6.69 -39.22 -0.26 1.31 16 5 C -0.15 -1.87 9.99 -39.43 -0.39 -2.27 16 6 C -0.07 -0.90 9.67 -39.60 -0.38 -1.29 16 7 C -0.14 -1.86 4.62 -104.60 -0.48 -2.34 16 8 C 0.15 2.15 3.06 -27.89 -0.09 2.06 16 9 H 0.10 1.30 8.05 -51.93 -0.42 0.88 16 10 O -0.56 -8.19 12.45 -35.23 -0.44 -8.63 16 11 C -0.10 -1.71 2.03 -90.58 -0.18 -1.89 16 12 C -0.14 -2.59 4.19 -26.61 -0.11 -2.70 16 13 C 0.17 4.14 5.31 -3.71 -0.02 4.13 16 14 N -0.59 -14.92 3.00 -172.32 -0.52 -15.43 16 15 C -0.25 -6.93 9.59 -15.06 -0.14 -7.07 16 16 H 0.06 1.74 7.89 -52.48 -0.41 1.33 16 17 C 0.00 0.02 4.91 -17.43 -0.09 -0.07 16 18 N -0.90 -26.38 11.19 55.49 0.62 -25.76 16 19 Si 0.90 21.79 29.59 -169.99 -5.03 16.76 16 20 H -0.28 -6.79 7.11 56.52 0.40 -6.39 16 21 H -0.29 -7.07 7.11 56.52 0.40 -6.67 16 22 H -0.28 -6.77 7.11 56.52 0.40 -6.37 16 23 C 0.14 3.08 6.51 -3.72 -0.02 3.05 16 24 C -0.12 -2.14 5.20 -26.62 -0.14 -2.28 16 25 C -0.07 -0.85 7.20 -39.60 -0.29 -1.13 16 26 C -0.21 -2.53 9.04 -39.43 -0.36 -2.89 16 27 H 0.06 0.43 8.14 -51.93 -0.42 0.01 16 28 H 0.07 0.47 8.14 -51.93 -0.42 0.04 16 29 H 0.08 0.38 8.14 -51.93 -0.42 -0.04 16 30 H 0.06 0.54 7.67 -51.93 -0.40 0.14 16 31 H 0.06 0.48 7.66 -51.93 -0.40 0.08 16 32 H 0.13 1.36 8.06 -52.48 -0.42 0.94 16 33 H 0.13 1.31 8.06 -52.49 -0.42 0.89 16 34 H 0.37 4.88 5.71 45.56 0.26 5.15 16 35 H 0.07 1.19 8.14 -51.93 -0.42 0.77 16 36 H 0.05 0.96 6.85 -51.93 -0.36 0.60 16 37 H 0.05 0.91 5.79 -51.93 -0.30 0.61 16 38 H 0.02 0.39 8.14 -51.93 -0.42 -0.03 16 39 H 0.09 2.30 6.04 -51.93 -0.31 1.98 16 40 H 0.25 7.17 8.31 -40.82 -0.34 6.83 16 41 H 0.01 0.31 8.14 -51.93 -0.42 -0.11 16 42 H 0.05 1.10 7.93 -51.93 -0.41 0.69 16 43 H 0.05 0.74 8.14 -51.93 -0.42 0.32 16 44 H 0.06 1.21 7.73 -51.93 -0.40 0.81 16 45 H 0.12 1.48 6.21 -52.48 -0.33 1.15 16 46 H 0.13 1.30 6.30 -52.49 -0.33 0.97 16 LS Contribution 356.66 15.07 5.37 5.37 Total: -1.00 -31.18 356.66 -9.30 -40.48 By element: Atomic # 1 Polarization: 11.32 SS G_CDS: -6.75 Total: 4.57 kcal Atomic # 6 Polarization: -10.98 SS G_CDS: -2.37 Total: -13.35 kcal Atomic # 7 Polarization: -41.30 SS G_CDS: 0.10 Total: -41.19 kcal Atomic # 8 Polarization: -12.01 SS G_CDS: -0.64 Total: -12.65 kcal Atomic # 14 Polarization: 21.79 SS G_CDS: -5.03 Total: 16.76 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -31.18 -9.30 -40.48 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000291946356.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.820 kcal (2) G-P(sol) polarization free energy of solvation -31.176 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.996 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.304 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.480 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.300 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds