Wall clock time and date at job start Tue Mar 31 2020 10:20:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 C 1.46899 * 111.00296 * 2 1 4 4 C 1.46898 * 110.99955 * 123.95530 * 2 1 3 5 5 C 1.53006 * 109.47254 * 66.04678 * 4 2 1 6 6 C 1.53000 * 109.47226 * 179.97438 * 5 4 2 7 7 O 1.45196 * 109.46790 * 179.97438 * 6 5 4 8 8 C 1.34234 * 116.99852 * 179.97438 * 7 6 5 9 9 O 1.20829 * 119.99812 * 0.02562 * 8 7 6 10 10 C 1.50700 * 120.00163 * 180.27896 * 8 7 6 11 11 C 1.52996 * 109.47035 * 179.72827 * 10 8 7 12 12 H 1.09003 * 109.46848 * 305.36488 * 11 10 8 13 13 C 1.50697 * 109.47591 * 65.36597 * 11 10 8 14 14 H 1.08004 * 120.00086 * 34.61691 * 13 11 10 15 15 C 1.37878 * 120.00314 * 214.62541 * 13 11 10 16 16 N 1.31510 * 120.00128 * 186.44867 * 15 13 11 17 17 Si 1.86796 * 119.99875 * 6.44057 * 15 13 11 18 18 H 1.48498 * 109.47443 * 85.00861 * 17 15 13 19 19 H 1.48504 * 109.47188 * 205.01377 * 17 15 13 20 20 H 1.48504 * 109.47104 * 325.01043 * 17 15 13 21 21 C 1.50700 * 109.47272 * 185.36624 * 11 10 8 22 22 C 1.38237 * 119.99782 * 296.36399 * 21 11 10 23 23 C 1.38232 * 119.99821 * 179.78793 * 22 21 11 24 24 C 1.38238 * 120.00188 * 0.43598 * 23 22 21 25 25 C 1.38234 * 119.99909 * 359.80852 * 24 23 22 26 26 C 1.38234 * 119.99980 * 359.97438 * 25 24 23 27 27 H 1.08993 * 109.46675 * 296.04352 * 1 2 3 28 28 H 1.09002 * 109.46965 * 56.04404 * 1 2 3 29 29 H 1.09000 * 109.46940 * 176.04350 * 1 2 3 30 30 H 1.08991 * 109.47260 * 183.95426 * 3 2 1 31 31 H 1.08999 * 109.47155 * 303.95582 * 3 2 1 32 32 H 1.08998 * 109.46873 * 63.95013 * 3 2 1 33 33 H 1.08998 * 109.46985 * 306.04619 * 4 2 1 34 34 H 1.09000 * 109.46883 * 186.04294 * 4 2 1 35 35 H 1.08997 * 109.46806 * 59.99661 * 5 4 2 36 36 H 1.09009 * 109.46706 * 300.00224 * 5 4 2 37 37 H 1.08998 * 109.46950 * 59.99979 * 6 5 4 38 38 H 1.09000 * 109.46946 * 299.99636 * 6 5 4 39 39 H 1.09001 * 109.46669 * 299.72513 * 10 8 7 40 40 H 1.08999 * 109.47058 * 59.72760 * 10 8 7 41 41 H 0.97007 * 120.00368 * 179.97438 * 16 15 13 42 42 H 1.07998 * 119.99820 * 359.97438 * 22 21 11 43 43 H 1.08001 * 120.00069 * 180.27214 * 23 22 21 44 44 H 1.07995 * 120.00279 * 179.84161 * 24 23 22 45 45 H 1.07999 * 119.99985 * 179.97438 * 25 24 23 46 46 H 1.08000 * 120.00359 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9955 -0.7660 1.1376 5 6 1.6315 -2.2427 0.9703 6 6 2.1803 -3.0406 2.1548 7 8 1.8344 -4.4418 1.9962 8 6 2.2454 -5.2835 2.9577 9 8 2.8731 -4.8632 3.9007 10 6 1.9290 -6.7536 2.8581 11 6 2.5127 -7.4841 4.0691 12 1 3.5784 -7.2678 4.1448 13 6 1.8153 -7.0181 5.3211 14 1 0.7665 -6.7622 5.2916 15 6 2.5163 -6.9183 6.5042 16 7 1.8834 -6.6350 7.6216 17 14 4.3649 -7.1857 6.5199 18 1 5.0518 -5.9161 6.1714 19 1 4.7903 -7.6233 7.8738 20 1 4.7224 -8.2306 5.5270 21 6 2.3118 -8.9686 3.9051 22 6 1.0332 -9.4925 3.8632 23 6 0.8488 -10.8537 3.7084 24 6 1.9431 -11.6921 3.6045 25 6 3.2216 -11.1687 3.6516 26 6 3.4060 -9.8070 3.8018 27 1 -0.3632 0.4512 0.9233 28 1 -0.3633 0.5740 -0.8524 29 1 -0.3633 -1.0252 -0.0709 30 1 3.0828 1.3432 -0.0709 31 1 1.5899 1.9163 -0.8524 32 1 1.7044 1.8723 0.9233 33 1 1.5611 -0.3873 2.0627 34 1 3.0797 -0.6611 1.1755 35 1 2.0658 -2.6213 0.0451 36 1 0.5471 -2.3475 0.9322 37 1 1.7464 -2.6620 3.0802 38 1 3.2646 -2.9357 2.1923 39 1 0.8480 -6.8918 2.8367 40 1 2.3652 -7.1580 1.9448 41 1 2.3764 -6.5651 8.4541 42 1 0.1784 -8.8380 3.9483 43 1 -0.1501 -11.2626 3.6712 44 1 1.7990 -12.7558 3.4862 45 1 4.0765 -11.8237 3.5709 46 1 4.4049 -9.3981 3.8390 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000792272546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:20:39 Heat of formation + Delta-G solvation = -65.707140 kcal Electronic energy + Delta-G solvation = -24583.769177 eV Core-core repulsion = 21052.226322 eV Total energy + Delta-G solvation = -3531.542855 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 305.178 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -39.83614 -38.59206 -37.94027 -36.06885 -34.14665 -32.55747 -31.73009 -30.22339 -29.20788 -27.86584 -26.93356 -25.82110 -23.11244 -22.46443 -21.88670 -21.00481 -20.60099 -19.16563 -17.10264 -17.00053 -16.37503 -16.16545 -15.88898 -15.47017 -15.14877 -14.90540 -14.51097 -14.29096 -14.04784 -13.82218 -13.03780 -12.77024 -12.71416 -12.69183 -12.57959 -12.38473 -12.18044 -12.01470 -11.90802 -11.79417 -11.64045 -11.31827 -11.08898 -10.91344 -10.82046 -10.57898 -10.40394 -10.08039 -9.95815 -9.68312 -9.54684 -9.19313 -8.65551 -8.46765 -8.21864 -7.85566 -6.04974 -4.03190 2.08677 2.12450 3.06781 3.12605 3.38873 3.43199 3.47679 3.78249 4.48839 4.54243 4.72385 4.85941 4.91625 5.11102 5.12759 5.24012 5.27326 5.33764 5.37086 5.47589 5.51037 5.54575 5.55302 5.57607 5.65363 5.67499 5.76312 5.89142 5.92606 6.00879 6.04535 6.12179 6.22826 6.29465 6.51114 6.66230 6.72107 6.73306 6.79278 6.93744 7.07870 7.13434 7.25566 7.52183 7.67114 7.78067 8.45091 8.60681 8.93914 9.59426 11.07622 Molecular weight = 305.18amu Principal moments of inertia in cm(-1) A = 0.016593 B = 0.003147 C = 0.002845 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1687.047355 B = 8894.805778 C = 9839.069594 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 N -0.548 5.548 3 C 0.024 3.976 4 C 0.056 3.944 5 C -0.115 4.115 6 C 0.068 3.932 7 O -0.371 6.371 8 C 0.458 3.542 9 O -0.474 6.474 10 C -0.090 4.090 11 C 0.053 3.947 12 H 0.050 0.950 13 C -0.497 4.497 14 H 0.073 0.927 15 C 0.087 3.913 16 N -0.896 5.896 17 Si 0.871 3.129 18 H -0.272 1.272 19 H -0.294 1.294 20 H -0.259 1.259 21 C -0.039 4.039 22 C -0.100 4.100 23 C -0.127 4.127 24 C -0.148 4.148 25 C -0.126 4.126 26 C -0.135 4.135 27 H 0.026 0.974 28 H 0.067 0.933 29 H 0.074 0.926 30 H 0.068 0.932 31 H 0.068 0.932 32 H 0.025 0.975 33 H 0.039 0.961 34 H 0.078 0.922 35 H 0.081 0.919 36 H 0.073 0.927 37 H 0.066 0.934 38 H 0.065 0.935 39 H 0.096 0.904 40 H 0.081 0.919 41 H 0.263 0.737 42 H 0.120 0.880 43 H 0.111 0.889 44 H 0.108 0.892 45 H 0.109 0.891 46 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.690 6.107 -14.948 16.162 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 N -0.271 5.271 3 C -0.124 4.124 4 C -0.072 4.072 5 C -0.153 4.153 6 C -0.007 4.007 7 O -0.290 6.290 8 C 0.300 3.700 9 O -0.357 6.357 10 C -0.128 4.128 11 C 0.034 3.966 12 H 0.069 0.931 13 C -0.533 4.533 14 H 0.091 0.909 15 C -0.116 4.116 16 N -0.533 5.533 17 Si 0.699 3.301 18 H -0.198 1.198 19 H -0.221 1.221 20 H -0.184 1.184 21 C -0.040 4.040 22 C -0.119 4.119 23 C -0.145 4.145 24 C -0.166 4.166 25 C -0.144 4.144 26 C -0.153 4.153 27 H 0.045 0.955 28 H 0.086 0.914 29 H 0.093 0.907 30 H 0.087 0.913 31 H 0.087 0.913 32 H 0.044 0.956 33 H 0.057 0.943 34 H 0.096 0.904 35 H 0.099 0.901 36 H 0.092 0.908 37 H 0.085 0.915 38 H 0.083 0.917 39 H 0.114 0.886 40 H 0.099 0.901 41 H 0.073 0.927 42 H 0.138 0.862 43 H 0.129 0.871 44 H 0.126 0.874 45 H 0.127 0.873 46 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -0.308 6.096 -14.864 16.069 hybrid contribution 0.732 0.411 1.230 1.490 sum 0.425 6.507 -13.634 15.113 Atomic orbital electron populations 1.22478 0.87237 1.02790 1.00453 1.61944 1.08257 1.13785 1.43162 1.22383 1.00855 0.88676 1.00508 1.22026 1.00547 0.93109 0.91516 1.21510 1.02248 0.93014 0.98487 1.22772 1.00262 0.78919 0.98744 1.86483 1.73770 1.19114 1.49619 1.23885 0.76835 0.89779 0.79538 1.90699 1.35913 1.78029 1.31043 1.21474 1.03758 0.86530 1.01017 1.18188 0.98070 0.86762 0.93617 0.93140 1.20620 0.97585 1.44219 0.90913 0.90899 1.24891 0.98003 0.93475 0.95237 1.69893 1.36067 1.48550 0.98786 0.86951 0.86916 0.79253 0.76959 1.19799 1.22076 1.18404 1.20620 0.92520 0.97858 0.92998 1.20970 0.97398 0.94427 0.99057 1.21054 0.98024 0.94044 1.01370 1.20875 0.92974 0.98752 1.03981 1.20963 0.96633 0.95183 1.01653 1.21143 0.98681 0.93441 1.02019 0.95509 0.91436 0.90730 0.91269 0.91323 0.95601 0.94291 0.90353 0.90061 0.90812 0.91536 0.91676 0.88581 0.90073 0.92718 0.86171 0.87109 0.87375 0.87323 0.86971 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.16 9.32 60.07 0.56 0.72 16 2 N -0.55 -5.28 5.02 -251.26 -1.26 -6.54 16 3 C 0.02 0.19 9.57 60.06 0.57 0.76 16 4 C 0.06 0.57 4.96 -3.82 -0.02 0.55 16 5 C -0.11 -1.30 5.52 -26.73 -0.15 -1.45 16 6 C 0.07 0.99 5.47 37.16 0.20 1.19 16 7 O -0.37 -6.39 10.22 -39.27 -0.40 -6.79 16 8 C 0.46 9.29 7.71 36.01 0.28 9.56 16 9 O -0.47 -11.41 14.75 -18.75 -0.28 -11.68 16 10 C -0.09 -1.70 5.05 -27.89 -0.14 -1.85 16 11 C 0.05 1.19 1.28 -92.93 -0.12 1.07 16 12 H 0.05 1.20 4.79 -51.93 -0.25 0.95 16 13 C -0.50 -13.46 6.94 -34.44 -0.24 -13.70 16 14 H 0.07 2.13 8.06 -52.48 -0.42 1.71 16 15 C 0.09 2.52 5.47 -17.82 -0.10 2.42 16 16 N -0.90 -27.64 13.96 55.43 0.77 -26.86 16 17 Si 0.87 22.34 27.04 -169.99 -4.60 17.75 16 18 H -0.27 -7.12 7.11 56.52 0.40 -6.72 16 19 H -0.29 -7.56 7.11 56.52 0.40 -7.16 16 20 H -0.26 -6.14 5.15 56.52 0.29 -5.85 16 21 C -0.04 -0.82 4.77 -104.62 -0.50 -1.32 16 22 C -0.10 -1.94 8.87 -39.58 -0.35 -2.29 16 23 C -0.13 -2.14 10.05 -39.58 -0.40 -2.54 16 24 C -0.15 -2.38 10.05 -39.58 -0.40 -2.78 16 25 C -0.13 -2.14 10.05 -39.58 -0.40 -2.54 16 26 C -0.13 -2.62 9.13 -39.58 -0.36 -2.98 16 27 H 0.03 0.22 8.14 -51.93 -0.42 -0.20 16 28 H 0.07 0.49 8.12 -51.93 -0.42 0.07 16 29 H 0.07 0.64 6.47 -51.93 -0.34 0.30 16 30 H 0.07 0.50 8.12 -51.93 -0.42 0.08 16 31 H 0.07 0.46 8.12 -51.93 -0.42 0.04 16 32 H 0.03 0.20 8.14 -51.93 -0.42 -0.23 16 33 H 0.04 0.40 8.12 -51.93 -0.42 -0.02 16 34 H 0.08 0.75 8.06 -51.93 -0.42 0.33 16 35 H 0.08 0.92 8.14 -51.93 -0.42 0.50 16 36 H 0.07 0.82 6.55 -51.92 -0.34 0.48 16 37 H 0.07 1.02 8.13 -51.93 -0.42 0.60 16 38 H 0.06 0.93 8.13 -51.93 -0.42 0.51 16 39 H 0.10 1.71 7.80 -51.93 -0.41 1.30 16 40 H 0.08 1.30 8.14 -51.93 -0.42 0.88 16 41 H 0.26 7.71 8.31 -40.82 -0.34 7.37 16 42 H 0.12 2.28 7.77 -52.49 -0.41 1.87 16 43 H 0.11 1.57 8.06 -52.49 -0.42 1.15 16 44 H 0.11 1.43 8.06 -52.49 -0.42 1.01 16 45 H 0.11 1.55 8.06 -52.49 -0.42 1.12 16 46 H 0.11 2.13 6.95 -52.49 -0.37 1.77 16 LS Contribution 374.80 15.07 5.65 5.65 Total: -1.00 -32.42 374.80 -9.35 -41.77 By element: Atomic # 1 Polarization: 9.55 SS G_CDS: -7.68 Total: 1.87 kcal Atomic # 6 Polarization: -13.61 SS G_CDS: -1.55 Total: -15.16 kcal Atomic # 7 Polarization: -32.91 SS G_CDS: -0.49 Total: -33.40 kcal Atomic # 8 Polarization: -17.80 SS G_CDS: -0.68 Total: -18.48 kcal Atomic # 14 Polarization: 22.34 SS G_CDS: -4.60 Total: 17.75 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -32.42 -9.35 -41.77 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000792272546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.938 kcal (2) G-P(sol) polarization free energy of solvation -32.422 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.361 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.346 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.769 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.707 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds