Wall clock time and date at job start Tue Mar 31 2020 09:17:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 N 1.46502 * 109.46874 * 2 1 4 4 C 1.36888 * 120.00105 * 274.27178 * 3 2 1 5 5 H 1.08002 * 119.99886 * 185.83920 * 4 3 2 6 6 C 1.39037 * 120.00234 * 5.83202 * 4 3 2 7 7 N 1.31367 * 119.99494 * 13.10309 * 6 4 3 8 8 Si 1.86803 * 120.00131 * 193.10718 * 6 4 3 9 9 H 1.48497 * 109.47031 * 90.00119 * 8 6 4 10 10 H 1.48502 * 109.46779 * 210.00290 * 8 6 4 11 11 H 1.48498 * 109.46711 * 329.99677 * 8 6 4 12 12 C 1.34778 * 120.00119 * 94.27295 * 3 2 1 13 13 O 1.21602 * 120.00457 * 185.78929 * 12 3 2 14 14 C 1.47597 * 119.99678 * 5.78688 * 12 3 2 15 15 C 1.40141 * 120.55124 * 54.98171 * 14 12 3 16 16 C 1.38422 * 118.29557 * 180.28674 * 15 14 12 17 17 F 1.35102 * 120.35687 * 179.75199 * 16 15 14 18 18 C 1.38786 * 119.28556 * 359.73182 * 16 15 14 19 19 Cl 1.73604 * 119.47047 * 179.97438 * 18 16 15 20 20 N 1.32016 * 121.05673 * 0.02562 * 18 16 15 21 21 C 1.31800 * 121.87758 * 359.97438 * 20 18 16 22 22 Cl 1.73602 * 119.71126 * 179.97438 * 21 20 18 23 23 H 1.08998 * 109.47292 * 180.02562 * 1 2 3 24 24 H 1.09002 * 109.47115 * 299.99566 * 1 2 3 25 25 H 1.09002 * 109.47553 * 59.99660 * 1 2 3 26 26 H 1.09002 * 109.47115 * 240.00434 * 2 1 3 27 27 H 1.08999 * 109.47192 * 119.99979 * 2 1 3 28 28 H 0.97007 * 119.99971 * 179.97438 * 7 6 4 29 29 H 1.08001 * 120.84947 * 0.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 6 2.1631 2.0560 -1.1822 5 1 2.6110 3.0387 -1.1916 6 6 1.7339 1.4762 -2.3707 7 7 0.9654 0.4112 -2.3419 8 14 2.2500 2.2116 -4.0085 9 1 3.5219 1.5870 -4.4527 10 1 1.1934 1.9568 -5.0204 11 1 2.4448 3.6757 -3.8542 12 6 2.3249 1.9877 1.1640 13 8 2.6289 3.1650 1.1746 14 6 2.2915 1.2226 2.4257 15 6 3.0343 0.0422 2.5630 16 6 2.9640 -0.6413 3.7646 17 9 3.6590 -1.7864 3.9404 18 6 2.1723 -0.1373 4.7870 19 17 2.0801 -0.9910 6.2958 20 7 1.4873 0.9803 4.6302 21 6 1.5222 1.6660 3.5051 22 17 0.5984 3.1286 3.3599 23 1 -0.3634 -1.0276 0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 0.5139 -0.8899 26 1 1.8933 -0.5138 -0.8900 27 1 1.8933 -0.5138 0.8900 28 1 0.6656 0.0068 -3.1711 29 1 3.6425 -0.3270 1.7505 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000103387458.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 09:17:06 Heat of formation + Delta-G solvation = -27.447340 kcal Electronic energy + Delta-G solvation = -20837.415095 eV Core-core repulsion = 17149.422125 eV Total energy + Delta-G solvation = -3687.992970 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 306.008 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -49.12729 -40.43553 -38.44604 -36.86534 -36.34915 -35.35540 -32.99825 -31.72030 -30.53662 -29.63286 -25.79594 -24.38959 -23.61167 -22.26724 -20.10566 -18.06005 -17.72210 -17.30324 -16.91989 -16.30224 -15.95632 -14.98336 -14.57340 -14.43168 -14.11406 -13.95885 -13.60839 -13.06402 -12.95027 -12.72377 -12.33002 -11.91124 -11.57487 -11.53542 -11.27740 -11.04873 -10.97124 -10.83980 -10.51189 -10.36930 -10.27717 -10.12446 -9.73779 -9.09568 -8.79474 -8.60322 -8.02332 -6.53993 -4.04961 0.42821 0.75786 1.39298 2.05260 2.92695 3.10404 3.13208 3.16238 3.54240 3.81583 3.90589 4.25376 4.41406 4.67421 4.89723 4.96206 5.14360 5.50908 5.66466 5.98612 6.10491 6.47054 6.55571 6.70534 7.10902 7.22636 7.28155 7.63847 7.78167 8.22326 8.87769 9.08601 9.64642 10.34121 Molecular weight = 306.01amu Principal moments of inertia in cm(-1) A = 0.021173 B = 0.005022 C = 0.004495 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1322.145336 B = 5573.707732 C = 6227.710487 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C 0.111 3.889 3 N -0.413 5.413 4 C -0.287 4.287 5 H 0.113 0.887 6 C 0.025 3.975 7 N -0.859 5.859 8 Si 0.936 3.064 9 H -0.275 1.275 10 H -0.281 1.281 11 H -0.267 1.267 12 C 0.460 3.540 13 O -0.568 6.568 14 C -0.080 4.080 15 C -0.072 4.072 16 C 0.070 3.930 17 F -0.114 7.114 18 C 0.150 3.850 19 Cl -0.012 7.012 20 N -0.448 5.448 21 C 0.203 3.797 22 Cl 0.011 6.989 23 H 0.037 0.963 24 H 0.016 0.984 25 H 0.103 0.897 26 H 0.112 0.888 27 H 0.033 0.967 28 H 0.271 0.729 29 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.028 -5.185 7.916 9.519 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.012 4.012 3 N -0.129 5.129 4 C -0.414 4.414 5 H 0.130 0.870 6 C -0.179 4.179 7 N -0.498 5.498 8 Si 0.762 3.238 9 H -0.201 1.201 10 H -0.207 1.207 11 H -0.191 1.191 12 C 0.248 3.752 13 O -0.454 6.454 14 C -0.088 4.088 15 C -0.099 4.099 16 C 0.046 3.954 17 F -0.093 7.093 18 C -0.017 4.017 19 Cl 0.017 6.983 20 N -0.160 5.160 21 C 0.037 3.963 22 Cl 0.040 6.960 23 H 0.056 0.944 24 H 0.035 0.965 25 H 0.121 0.879 26 H 0.130 0.870 27 H 0.051 0.949 28 H 0.083 0.917 29 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges 0.489 -4.415 8.516 9.605 hybrid contribution 0.497 -0.418 -1.060 1.243 sum 0.986 -4.833 7.457 8.941 Atomic orbital electron populations 1.22230 0.95902 1.00034 1.02074 1.21899 0.95571 0.82927 1.00789 1.43924 1.52454 1.11872 1.04648 1.20012 1.36240 1.03227 0.81955 0.86977 1.25430 0.95407 0.96748 1.00298 1.70160 1.30405 1.21088 1.28146 0.85740 0.78348 0.79679 0.79998 1.20066 1.20686 1.19128 1.17121 0.89113 0.87046 0.81926 1.90691 1.55116 1.14559 1.84987 1.21064 0.95763 0.94619 0.97347 1.21836 0.98691 0.93257 0.96148 1.17988 0.96697 0.86229 0.94446 1.91567 1.76451 1.45742 1.95505 1.21406 0.97646 0.93137 0.89524 1.98414 1.97177 1.73381 1.29352 1.66299 1.20204 1.05356 1.24150 1.21496 0.94728 0.91367 0.88690 1.98443 1.70713 1.29864 1.96976 0.94367 0.96504 0.87915 0.87031 0.94889 0.91749 0.81247 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.95 9.52 37.16 0.35 -2.59 15 2 C 0.11 2.29 5.24 -4.04 -0.02 2.27 15 3 N -0.41 -9.61 2.62 -115.97 -0.30 -9.92 15 4 C -0.29 -7.14 9.50 -15.00 -0.14 -7.28 15 5 H 0.11 2.94 7.23 -52.49 -0.38 2.56 15 6 C 0.02 0.57 5.24 -17.45 -0.09 0.48 15 7 N -0.86 -19.58 7.36 55.50 0.41 -19.17 15 8 Si 0.94 18.65 29.57 -169.99 -5.03 13.62 15 9 H -0.27 -5.43 7.11 56.52 0.40 -5.03 15 10 H -0.28 -5.56 7.11 56.52 0.40 -5.16 15 11 H -0.27 -5.43 7.11 56.52 0.40 -5.02 15 12 C 0.46 10.55 6.51 -12.44 -0.08 10.47 15 13 O -0.57 -14.70 15.81 5.28 0.08 -14.62 15 14 C -0.08 -1.55 4.91 -104.79 -0.51 -2.06 15 15 C -0.07 -1.16 7.62 -38.80 -0.30 -1.46 15 16 C 0.07 1.04 7.30 -39.31 -0.29 0.75 15 17 F -0.11 -1.56 16.84 2.25 0.04 -1.53 15 18 C 0.15 2.33 7.28 -17.27 -0.13 2.20 15 19 Cl -0.01 -0.15 28.76 -51.86 -1.49 -1.65 15 20 N -0.45 -7.75 10.30 -7.07 -0.07 -7.83 15 21 C 0.20 3.81 7.31 -16.99 -0.12 3.68 15 22 Cl 0.01 0.21 27.56 -51.86 -1.43 -1.22 15 23 H 0.04 0.69 8.14 -51.93 -0.42 0.27 15 24 H 0.02 0.33 8.14 -51.93 -0.42 -0.09 15 25 H 0.10 2.35 5.86 -51.93 -0.30 2.05 15 26 H 0.11 2.43 5.99 -51.93 -0.31 2.12 15 27 H 0.03 0.60 4.44 -51.93 -0.23 0.37 15 28 H 0.27 5.88 8.31 -40.82 -0.34 5.54 15 29 H 0.17 2.45 7.62 -52.49 -0.40 2.05 15 LS Contribution 286.30 15.07 4.31 4.31 Total: -1.00 -25.48 286.30 -6.41 -31.89 By element: Atomic # 1 Polarization: 1.25 SS G_CDS: -1.61 Total: -0.35 kcal Atomic # 6 Polarization: 7.78 SS G_CDS: -1.33 Total: 6.45 kcal Atomic # 7 Polarization: -36.95 SS G_CDS: 0.03 Total: -36.92 kcal Atomic # 8 Polarization: -14.70 SS G_CDS: 0.08 Total: -14.62 kcal Atomic # 9 Polarization: -1.56 SS G_CDS: 0.04 Total: -1.53 kcal Atomic # 14 Polarization: 18.65 SS G_CDS: -5.03 Total: 13.62 kcal Atomic # 17 Polarization: 0.05 SS G_CDS: -2.92 Total: -2.87 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -25.48 -6.41 -31.89 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000103387458.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.443 kcal (2) G-P(sol) polarization free energy of solvation -25.475 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.032 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.415 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.890 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.447 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds