Wall clock time and date at job start Tue Mar 31 2020 10:03:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38200 * 119.94443 * 2 1 4 4 C 1.38786 * 119.95220 * 180.02562 * 3 2 1 5 5 N 1.39846 * 120.08184 * 180.02562 * 4 3 2 6 6 C 1.46850 * 110.99817 * 295.78793 * 5 4 3 7 7 C 1.53029 * 109.52324 * 185.83945 * 6 5 4 8 8 C 1.53122 * 109.28046 * 300.81900 * 7 6 5 9 9 C 1.53112 * 109.15870 * 57.65329 * 8 7 6 10 10 H 1.08998 * 109.50469 * 62.32952 * 9 8 7 11 11 C 1.50704 * 109.50375 * 182.40793 * 9 8 7 12 12 H 1.08000 * 120.00353 * 119.99921 * 11 9 8 13 13 C 1.37878 * 119.99742 * 299.99906 * 11 9 8 14 14 N 1.31510 * 120.00111 * 0.02562 * 13 11 9 15 15 Si 1.86807 * 119.99821 * 179.97438 * 13 11 9 16 16 H 1.48496 * 109.46702 * 90.00623 * 15 13 11 17 17 H 1.48504 * 109.46958 * 210.00250 * 15 13 11 18 18 H 1.48494 * 109.47277 * 330.00409 * 15 13 11 19 19 C 1.46848 * 111.00227 * 59.99185 * 5 4 3 20 20 C 1.39118 * 119.83829 * 0.27226 * 4 3 2 21 21 F 1.35099 * 120.05465 * 179.72771 * 20 4 3 22 22 C 1.38238 * 119.88835 * 359.42361 * 20 4 3 23 23 C 1.38227 * 119.94808 * 179.97438 * 2 1 3 24 24 N 1.48010 * 119.91832 * 359.97438 * 23 2 1 25 25 O 1.21802 * 119.99694 * 216.86954 * 24 23 2 26 26 O 1.21795 * 120.00046 * 36.86084 * 24 23 2 27 27 H 1.08999 * 109.46977 * 95.71295 * 1 2 3 28 28 H 1.09000 * 109.47172 * 215.71039 * 1 2 3 29 29 H 1.08999 * 109.47173 * 335.71411 * 1 2 3 30 30 H 1.07999 * 120.02051 * 359.97438 * 3 2 1 31 31 H 1.09005 * 109.46509 * 65.82290 * 6 5 4 32 32 H 1.09003 * 109.45959 * 305.85622 * 6 5 4 33 33 H 1.08999 * 109.50397 * 180.88156 * 7 6 5 34 34 H 1.08996 * 109.51003 * 60.76211 * 7 6 5 35 35 H 1.08992 * 109.52591 * 177.56148 * 8 7 6 36 36 H 1.08998 * 109.51983 * 297.68774 * 8 7 6 37 37 H 0.97005 * 120.00225 * 179.97438 * 14 13 11 38 38 H 1.09005 * 109.45737 * 54.14719 * 19 5 4 39 39 H 1.09003 * 109.46576 * 294.18406 * 19 5 4 40 40 H 1.08003 * 119.97395 * 180.26896 * 22 20 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1968 1.1975 0.0000 4 6 3.5847 1.1977 -0.0005 5 7 4.2854 2.4079 0.0000 6 6 4.0325 3.1630 -1.2338 7 6 4.9238 4.4066 -1.2641 8 6 4.6207 5.2758 -0.0405 9 6 4.8453 4.4511 1.2298 10 1 5.8913 4.1502 1.2881 11 6 4.4924 5.2808 2.4373 12 1 3.7142 4.9517 3.1100 13 6 5.1631 6.4600 2.6834 14 7 6.1105 6.8610 1.8641 15 14 4.7252 7.4889 4.1798 16 1 5.5580 7.0639 5.3335 17 1 4.9799 8.9223 3.8868 18 1 3.2897 7.2984 4.5087 19 6 3.9563 3.2061 1.1878 20 6 4.2770 -0.0089 -0.0068 21 9 5.6280 -0.0138 -0.0129 22 6 3.5803 -1.2029 -0.0004 23 6 2.1970 -1.1977 0.0005 24 7 1.4540 -2.4778 0.0017 25 8 1.8784 -3.4277 0.6351 26 8 0.4181 -2.5812 -0.6306 27 1 -0.3633 -0.1023 -1.0226 28 1 -0.3633 -0.8344 0.5998 29 1 -0.3633 0.9367 0.4227 30 1 1.6562 2.1325 -0.0004 31 1 2.9858 3.4654 -1.2665 32 1 4.2560 2.5349 -2.0962 33 1 4.7246 4.9750 -2.1726 34 1 5.9709 4.1045 -1.2455 35 1 5.2835 6.1410 -0.0351 36 1 3.5843 5.6111 -0.0797 37 1 6.5821 7.6908 2.0370 38 1 4.1244 2.6093 2.0844 39 1 2.9099 3.5083 1.1439 40 1 4.1165 -2.1405 -0.0009 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000596325708.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:03:56 Heat of formation + Delta-G solvation = -23.025336 kcal Electronic energy + Delta-G solvation = -25618.871634 eV Core-core repulsion = 21737.148812 eV Total energy + Delta-G solvation = -3881.722822 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 308.132 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -48.98707 -42.41513 -40.25657 -38.05177 -36.74448 -34.36096 -32.91979 -32.32798 -30.29641 -29.98665 -27.68468 -26.06625 -25.15032 -23.80002 -22.80306 -21.77190 -21.28992 -19.51460 -18.99654 -18.74886 -17.91820 -17.24661 -16.61419 -16.19834 -15.93856 -15.81725 -14.86762 -14.59692 -14.33804 -14.28919 -14.06431 -13.63390 -13.07242 -13.02240 -12.79753 -12.60445 -12.48226 -12.17525 -12.13286 -11.88132 -11.71973 -11.28149 -11.16117 -11.07481 -10.93558 -10.82416 -10.34914 -10.09454 -9.75139 -9.57516 -9.33323 -9.07108 -8.86960 -8.48865 -8.29169 -6.10702 -4.18063 -0.27618 0.55810 0.93058 1.16618 2.81224 3.23054 3.30421 3.32104 3.60579 3.86825 4.03750 4.19699 4.34860 4.47665 4.82358 4.91714 5.02832 5.19717 5.22613 5.25929 5.36502 5.42025 5.59438 5.64898 5.69371 5.75532 5.86682 5.99892 6.07203 6.21471 6.25845 6.44486 6.49062 6.68710 6.90465 7.13618 7.21976 7.44570 7.45686 7.61431 7.88032 7.99316 8.28732 8.85006 9.47341 10.95288 Molecular weight = 308.13amu Principal moments of inertia in cm(-1) A = 0.020898 B = 0.003529 C = 0.003383 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1339.503752 B = 7931.281878 C = 8274.318853 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.022 4.022 3 C -0.124 4.124 4 C 0.131 3.869 5 N -0.509 5.509 6 C 0.068 3.932 7 C -0.118 4.118 8 C -0.113 4.113 9 C 0.056 3.944 10 H 0.038 0.962 11 C -0.519 4.519 12 H 0.054 0.946 13 C 0.066 3.934 14 N -0.886 5.886 15 Si 0.892 3.108 16 H -0.280 1.280 17 H -0.286 1.286 18 H -0.275 1.275 19 C 0.071 3.929 20 C 0.122 3.878 21 F -0.108 7.108 22 C -0.093 4.093 23 C -0.030 4.030 24 N 0.030 4.970 25 O -0.158 6.158 26 O -0.148 6.148 27 H 0.095 0.905 28 H 0.074 0.926 29 H 0.081 0.919 30 H 0.155 0.845 31 H 0.035 0.965 32 H 0.063 0.937 33 H 0.054 0.946 34 H 0.065 0.935 35 H 0.095 0.905 36 H 0.033 0.967 37 H 0.261 0.739 38 H 0.064 0.936 39 H 0.031 0.969 40 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.811 -11.664 -6.757 15.579 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.025 4.025 3 C -0.145 4.145 4 C 0.035 3.965 5 N -0.231 5.231 6 C -0.058 4.058 7 C -0.156 4.156 8 C -0.151 4.151 9 C 0.037 3.963 10 H 0.056 0.944 11 C -0.558 4.558 12 H 0.073 0.927 13 C -0.136 4.136 14 N -0.524 5.524 15 Si 0.720 3.280 16 H -0.206 1.206 17 H -0.212 1.212 18 H -0.200 1.200 19 C -0.054 4.054 20 C 0.101 3.899 21 F -0.086 7.086 22 C -0.113 4.113 23 C -0.112 4.112 24 N 0.552 4.448 25 O -0.374 6.374 26 O -0.367 6.367 27 H 0.113 0.887 28 H 0.093 0.907 29 H 0.099 0.901 30 H 0.172 0.828 31 H 0.054 0.946 32 H 0.081 0.919 33 H 0.073 0.927 34 H 0.084 0.916 35 H 0.114 0.886 36 H 0.052 0.948 37 H 0.071 0.929 38 H 0.083 0.917 39 H 0.050 0.950 40 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -6.734 -10.948 -6.759 14.522 hybrid contribution -0.857 0.387 0.828 1.253 sum -7.592 -10.561 -5.932 14.295 Atomic orbital electron populations 1.21036 0.88513 1.03985 1.04494 1.19658 0.97881 0.89950 0.94967 1.21659 0.93943 0.97937 1.00990 1.19485 0.90633 0.92663 0.93763 1.59896 1.55221 1.02555 1.05401 1.22180 0.98560 0.95505 0.89553 1.21705 0.99518 0.94574 0.99768 1.21697 1.00361 1.00222 0.92798 1.18689 0.95288 0.88599 0.93685 0.94382 1.21060 1.19971 1.06096 1.08683 0.92733 1.24916 0.94790 0.97490 0.96437 1.69872 1.23286 1.22765 1.36505 0.86598 0.78784 0.79512 0.83127 1.20603 1.21163 1.19971 1.22553 0.98839 0.95725 0.88266 1.17127 0.78182 0.91535 1.03080 1.91592 1.26756 1.96998 1.93293 1.20652 0.91498 0.99521 0.99669 1.20416 0.91445 0.83331 1.16039 1.43462 1.00554 1.02335 0.98497 1.94566 1.71561 1.30153 1.41151 1.94526 1.11874 1.89437 1.40867 0.88694 0.90741 0.90055 0.82779 0.94633 0.91860 0.92708 0.91626 0.88637 0.94833 0.92860 0.91705 0.95041 0.82247 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.12 8.62 36.00 0.31 -0.80 16 2 C -0.02 -0.25 5.87 -104.64 -0.61 -0.86 16 3 C -0.12 -1.49 8.33 -39.39 -0.33 -1.82 16 4 C 0.13 1.86 4.69 -83.67 -0.39 1.47 16 5 N -0.51 -8.49 4.46 -171.06 -0.76 -9.26 16 6 C 0.07 1.04 5.17 -3.84 -0.02 1.02 16 7 C -0.12 -2.05 6.09 -26.65 -0.16 -2.22 16 8 C -0.11 -2.42 5.02 -26.61 -0.13 -2.56 16 9 C 0.06 1.30 2.26 -91.69 -0.21 1.09 16 10 H 0.04 1.00 8.14 -51.93 -0.42 0.57 16 11 C -0.52 -13.37 8.56 -34.44 -0.29 -13.67 16 12 H 0.05 1.38 7.74 -52.49 -0.41 0.98 16 13 C 0.07 1.72 5.30 -17.82 -0.09 1.63 16 14 N -0.89 -24.09 11.35 55.43 0.63 -23.46 16 15 Si 0.89 20.36 29.54 -169.99 -5.02 15.34 16 16 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 17 H -0.29 -6.51 7.11 56.52 0.40 -6.10 16 18 H -0.27 -6.19 7.11 56.52 0.40 -5.78 16 19 C 0.07 1.35 4.34 -3.83 -0.02 1.33 16 20 C 0.12 1.67 7.31 -39.25 -0.29 1.39 16 21 F -0.11 -1.64 17.08 2.25 0.04 -1.60 16 22 C -0.09 -1.11 9.63 -39.55 -0.38 -1.49 16 23 C -0.03 -0.36 6.49 -79.92 -0.52 -0.88 16 24 N 0.03 0.39 4.14 33.98 0.14 0.53 16 25 O -0.16 -2.19 18.93 -29.46 -0.56 -2.75 16 26 O -0.15 -1.93 16.73 -29.46 -0.49 -2.43 16 27 H 0.09 0.76 8.13 -51.93 -0.42 0.34 16 28 H 0.07 0.71 6.90 -51.93 -0.36 0.35 16 29 H 0.08 0.61 8.05 -51.93 -0.42 0.19 16 30 H 0.15 1.69 7.13 -52.49 -0.37 1.31 16 31 H 0.04 0.51 7.56 -51.93 -0.39 0.12 16 32 H 0.06 0.87 8.11 -51.93 -0.42 0.45 16 33 H 0.05 0.84 8.14 -51.93 -0.42 0.42 16 34 H 0.06 1.21 8.14 -51.93 -0.42 0.79 16 35 H 0.10 2.35 6.15 -51.93 -0.32 2.03 16 36 H 0.03 0.71 8.14 -51.93 -0.42 0.29 16 37 H 0.26 6.82 8.31 -40.82 -0.34 6.48 16 38 H 0.06 1.27 8.11 -51.93 -0.42 0.85 16 39 H 0.03 0.57 7.34 -51.93 -0.38 0.19 16 40 H 0.16 1.63 8.00 -52.48 -0.42 1.21 16 LS Contribution 335.33 15.07 5.05 5.05 Total: -1.00 -27.02 335.33 -9.27 -36.29 By element: Atomic # 1 Polarization: 3.83 SS G_CDS: -5.16 Total: -1.33 kcal Atomic # 6 Polarization: -13.24 SS G_CDS: -3.14 Total: -16.38 kcal Atomic # 7 Polarization: -32.19 SS G_CDS: 0.01 Total: -32.19 kcal Atomic # 8 Polarization: -4.13 SS G_CDS: -1.05 Total: -5.18 kcal Atomic # 9 Polarization: -1.64 SS G_CDS: 0.04 Total: -1.60 kcal Atomic # 14 Polarization: 20.36 SS G_CDS: -5.02 Total: 15.34 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -27.02 -9.27 -36.29 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000596325708.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.263 kcal (2) G-P(sol) polarization free energy of solvation -27.016 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.752 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.273 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.289 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.025 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds