Wall clock time and date at job start Tue Mar 31 2020 10:31:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.50709 * 109.46791 * 2 1 4 4 O 1.21281 * 119.99566 * 0.02562 * 3 2 1 5 5 N 1.34773 * 119.99959 * 179.97438 * 3 2 1 6 6 C 1.46500 * 119.99871 * 180.02562 * 5 3 2 7 7 H 1.08997 * 109.47325 * 35.00339 * 6 5 3 8 8 C 1.53003 * 109.47162 * 275.00250 * 6 5 3 9 9 C 1.50701 * 109.46996 * 155.00374 * 6 5 3 10 10 O 1.21278 * 119.99978 * 14.20899 * 9 6 5 11 11 N 1.34772 * 119.99890 * 194.21553 * 9 6 5 12 12 C 1.46504 * 120.00308 * 4.07566 * 11 9 6 13 13 C 1.50702 * 109.47093 * 95.28723 * 12 11 9 14 14 H 1.08001 * 119.99580 * 0.02562 * 13 12 11 15 15 C 1.37874 * 119.99963 * 180.02562 * 13 12 11 16 16 N 1.31519 * 120.00130 * 180.02562 * 15 13 12 17 17 Si 1.86801 * 120.00073 * 0.02562 * 15 13 12 18 18 H 1.48495 * 109.47013 * 90.00367 * 17 15 13 19 19 H 1.48503 * 109.46867 * 210.00035 * 17 15 13 20 20 H 1.48503 * 109.47179 * 329.99930 * 17 15 13 21 21 C 1.46502 * 120.00045 * 184.07981 * 11 9 6 22 22 C 1.50702 * 109.47254 * 85.89177 * 21 11 9 23 23 C 1.34512 * 125.79099 * 89.99904 * 22 21 11 24 24 C 1.41381 * 106.83890 * 180.02562 * 23 22 21 25 25 C 1.34512 * 106.84418 * 359.97438 * 24 23 22 26 26 O 1.34305 * 125.78646 * 269.69356 * 22 21 11 27 27 H 1.08999 * 109.46551 * 179.97438 * 1 2 3 28 28 H 1.08995 * 109.47145 * 299.99348 * 1 2 3 29 29 H 1.08997 * 109.47090 * 59.99997 * 1 2 3 30 30 H 1.08995 * 109.47145 * 240.00652 * 2 1 3 31 31 H 1.08996 * 109.47571 * 120.00213 * 2 1 3 32 32 H 0.97006 * 120.00047 * 0.02562 * 5 3 2 33 33 H 1.09001 * 109.46988 * 306.94757 * 8 6 5 34 34 H 1.09001 * 109.46964 * 186.94980 * 8 6 5 35 35 H 1.08999 * 109.46994 * 66.95113 * 8 6 5 36 36 H 1.08993 * 109.47356 * 215.29467 * 12 11 9 37 37 H 1.08999 * 109.46838 * 335.29300 * 12 11 9 38 38 H 0.96990 * 120.00102 * 179.97438 * 16 15 13 39 39 H 1.09004 * 109.47249 * 205.89063 * 21 11 9 40 40 H 1.08997 * 109.46984 * 325.88698 * 21 11 9 41 41 H 1.08004 * 126.57945 * 0.03502 * 23 22 21 42 42 H 1.08001 * 126.57712 * 179.97438 * 24 23 22 43 43 H 1.08006 * 125.79350 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0323 1.4209 0.0000 4 8 1.2441 2.3427 0.0005 5 7 3.3574 1.6673 0.0005 6 6 3.8456 3.0485 0.0011 7 1 3.1729 3.6715 0.5905 8 6 3.8975 3.5717 -1.4358 9 6 5.2269 3.0928 0.6020 10 8 5.8556 2.0667 0.7532 11 7 5.7636 4.2726 0.9714 12 6 4.9713 5.5009 0.8721 13 6 4.3284 5.7929 2.2035 14 1 4.4939 5.1301 3.0399 15 6 3.5291 6.9063 2.3536 16 7 2.9685 7.1615 3.5156 17 14 3.2425 8.0523 0.9065 18 1 2.0473 7.6030 0.1485 19 1 3.0219 9.4336 1.4053 20 1 4.4304 8.0314 0.0157 21 6 7.1393 4.3268 1.4721 22 6 8.0925 4.4431 0.3106 23 6 8.5265 5.5916 -0.2389 24 6 9.3985 5.2370 -1.2937 25 6 9.4457 3.8931 -1.3254 26 8 8.6571 3.4177 -0.3477 27 1 -0.3632 -1.0277 -0.0005 28 1 -0.3633 0.5137 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 1.8934 -0.5137 -0.8900 31 1 1.8934 -0.5138 0.8899 32 1 3.9878 0.9300 0.0005 33 1 4.4702 2.8802 -2.0538 34 1 4.3749 4.5515 -1.4486 35 1 2.8842 3.6562 -1.8285 36 1 5.6206 6.3304 0.5923 37 1 4.1975 5.3739 0.1151 38 1 2.4065 7.9449 3.6213 39 1 7.2546 5.1922 2.1248 40 1 7.3582 3.4177 2.0321 41 1 8.2600 6.5925 0.0671 42 1 9.9256 5.9152 -1.9485 43 1 10.0234 3.2975 -2.0168 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000604537849.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:31:44 Heat of formation + Delta-G solvation = -57.132621 kcal Electronic energy + Delta-G solvation = -26266.931843 eV Core-core repulsion = 22507.190323 eV Total energy + Delta-G solvation = -3759.741520 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 308.157 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.32014 -40.10030 -38.87257 -35.56156 -34.75344 -32.88155 -32.76141 -32.57732 -31.10558 -29.77993 -28.00197 -25.93344 -24.89715 -23.25807 -22.26781 -21.45927 -20.48640 -20.00949 -18.89127 -17.41073 -17.24766 -16.86794 -16.44496 -15.84234 -15.69382 -15.48876 -14.90295 -14.68625 -14.24272 -14.17632 -13.83456 -13.31472 -12.98330 -12.74366 -12.62634 -12.57726 -12.50675 -12.46753 -12.16024 -12.07984 -11.71706 -11.65325 -11.44981 -11.36222 -11.11860 -10.92440 -10.70747 -10.36221 -9.74502 -9.67678 -9.63035 -9.40231 -8.86151 -8.74713 -8.32269 -8.04470 -6.24459 -4.27853 1.87760 2.74628 2.83744 2.97916 3.18125 3.20876 3.24102 3.28001 3.38968 3.86058 4.24984 4.80954 4.88587 4.97843 5.06498 5.11015 5.11949 5.21428 5.25580 5.41323 5.53939 5.56492 5.62962 5.77933 5.86748 5.94299 5.95309 5.97338 6.12274 6.15082 6.22801 6.24650 6.29302 6.35782 6.52814 6.67437 6.69017 7.07036 7.36605 7.37979 7.75357 7.87764 8.30546 8.47334 8.58385 8.80513 9.33610 10.87936 Molecular weight = 308.16amu Principal moments of inertia in cm(-1) A = 0.009160 B = 0.006083 C = 0.004095 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3055.924709 B = 4601.745444 C = 6836.063690 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.142 4.142 3 C 0.510 3.490 4 O -0.536 6.536 5 N -0.714 5.714 6 C 0.123 3.877 7 H 0.128 0.872 8 C -0.157 4.157 9 C 0.520 3.480 10 O -0.557 6.557 11 N -0.580 5.580 12 C 0.200 3.800 13 C -0.548 4.548 14 H 0.080 0.920 15 C 0.081 3.919 16 N -0.886 5.886 17 Si 0.866 3.134 18 H -0.269 1.269 19 H -0.282 1.282 20 H -0.263 1.263 21 C 0.197 3.803 22 C -0.016 4.016 23 C -0.203 4.203 24 C -0.217 4.217 25 C -0.050 4.050 26 O -0.166 6.166 27 H 0.058 0.942 28 H 0.063 0.937 29 H 0.060 0.940 30 H 0.090 0.910 31 H 0.092 0.908 32 H 0.406 0.594 33 H 0.058 0.942 34 H 0.075 0.925 35 H 0.071 0.929 36 H 0.037 0.963 37 H 0.040 0.960 38 H 0.268 0.732 39 H 0.119 0.881 40 H 0.092 0.908 41 H 0.148 0.852 42 H 0.144 0.856 43 H 0.197 0.803 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.958 -9.061 -10.203 14.889 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.194 4.194 2 C -0.182 4.182 3 C 0.296 3.704 4 O -0.412 6.412 5 N -0.368 5.368 6 C 0.015 3.985 7 H 0.146 0.854 8 C -0.216 4.216 9 C 0.308 3.692 10 O -0.437 6.437 11 N -0.310 5.310 12 C 0.080 3.920 13 C -0.586 4.586 14 H 0.098 0.902 15 C -0.123 4.123 16 N -0.523 5.523 17 Si 0.692 3.308 18 H -0.195 1.195 19 H -0.207 1.207 20 H -0.188 1.188 21 C 0.073 3.927 22 C -0.068 4.068 23 C -0.223 4.223 24 C -0.236 4.236 25 C -0.119 4.119 26 O -0.061 6.061 27 H 0.077 0.923 28 H 0.082 0.918 29 H 0.080 0.920 30 H 0.109 0.891 31 H 0.111 0.889 32 H 0.242 0.758 33 H 0.077 0.923 34 H 0.093 0.907 35 H 0.090 0.910 36 H 0.055 0.945 37 H 0.058 0.942 38 H 0.078 0.922 39 H 0.137 0.863 40 H 0.110 0.890 41 H 0.166 0.834 42 H 0.162 0.838 43 H 0.214 0.786 Dipole moment (debyes) X Y Z Total from point charges 5.526 -9.073 -9.923 14.537 hybrid contribution 0.268 0.772 -0.799 1.143 sum 5.794 -8.300 -10.722 14.745 Atomic orbital electron populations 1.21524 0.93095 1.01265 1.03511 1.21606 0.98524 0.93832 1.04240 1.20761 0.81907 0.91900 0.75844 1.90734 1.55147 1.46389 1.48956 1.45833 1.07345 1.08178 1.75411 1.20801 0.94455 0.84917 0.98303 0.85416 1.22139 1.03239 1.01701 0.94485 1.20436 0.87678 0.83438 0.77668 1.90605 1.63167 1.33297 1.56625 1.47878 1.12126 1.08636 1.62334 1.20081 0.91310 0.81822 0.98822 1.21300 1.30358 1.10940 0.95992 0.90188 1.24837 0.94730 0.97145 0.95636 1.69874 1.31364 1.27663 1.23371 0.86994 0.79686 0.80889 0.83205 1.19465 1.20731 1.18756 1.19736 0.78172 1.05337 0.89435 1.23213 0.99547 0.85215 0.98833 1.21676 1.02219 0.99203 0.99239 1.21792 1.04339 0.95365 1.02117 1.23981 0.98859 0.94728 0.94296 1.84114 1.48234 1.36155 1.37564 0.92320 0.91805 0.92048 0.89129 0.88918 0.75772 0.92315 0.90666 0.91006 0.94519 0.94250 0.92220 0.86322 0.88974 0.83384 0.83832 0.78649 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.49 9.20 37.16 0.34 -1.15 16 2 C -0.14 -1.56 6.42 -27.88 -0.18 -1.74 16 3 C 0.51 8.09 7.79 -10.98 -0.09 8.00 16 4 O -0.54 -10.72 15.64 5.56 0.09 -10.64 16 5 N -0.71 -11.37 5.02 -54.93 -0.28 -11.65 16 6 C 0.12 2.27 2.12 -69.08 -0.15 2.12 16 7 H 0.13 2.76 6.71 -51.93 -0.35 2.41 16 8 C -0.16 -2.54 9.05 37.16 0.34 -2.20 16 9 C 0.52 10.23 6.93 -10.99 -0.08 10.16 16 10 O -0.56 -11.48 15.48 5.56 0.09 -11.39 16 11 N -0.58 -11.43 2.45 -176.43 -0.43 -11.86 16 12 C 0.20 4.30 3.63 -5.19 -0.02 4.28 16 13 C -0.55 -14.18 9.94 -34.44 -0.34 -14.53 16 14 H 0.08 2.31 8.06 -52.49 -0.42 1.89 16 15 C 0.08 2.18 5.47 -17.82 -0.10 2.08 16 16 N -0.89 -25.73 13.96 55.43 0.77 -24.96 16 17 Si 0.87 19.81 27.47 -169.99 -4.67 15.15 16 18 H -0.27 -6.19 7.11 56.52 0.40 -5.79 16 19 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 20 H -0.26 -5.59 6.54 56.52 0.37 -5.22 16 21 C 0.20 3.46 5.95 -5.19 -0.03 3.43 16 22 C -0.02 -0.27 6.87 -35.62 -0.24 -0.52 16 23 C -0.20 -3.10 10.81 -39.70 -0.43 -3.53 16 24 C -0.22 -2.86 10.91 -39.70 -0.43 -3.30 16 25 C -0.05 -0.66 12.09 29.42 0.36 -0.30 16 26 O -0.17 -2.75 10.65 5.70 0.06 -2.69 16 27 H 0.06 0.49 8.14 -51.93 -0.42 0.07 16 28 H 0.06 0.80 8.10 -51.93 -0.42 0.37 16 29 H 0.06 0.72 8.10 -51.93 -0.42 0.30 16 30 H 0.09 0.78 8.14 -51.93 -0.42 0.36 16 31 H 0.09 0.89 8.14 -51.93 -0.42 0.46 16 32 H 0.41 5.79 7.72 -40.82 -0.31 5.48 16 33 H 0.06 0.86 8.14 -51.93 -0.42 0.44 16 34 H 0.07 1.22 6.26 -51.93 -0.33 0.90 16 35 H 0.07 1.14 8.14 -51.93 -0.42 0.72 16 36 H 0.04 0.77 7.17 -51.93 -0.37 0.40 16 37 H 0.04 0.84 3.98 -51.93 -0.21 0.63 16 38 H 0.27 7.31 8.31 -40.82 -0.34 6.97 16 39 H 0.12 1.97 8.04 -51.93 -0.42 1.56 16 40 H 0.09 1.63 7.49 -51.93 -0.39 1.24 16 41 H 0.15 2.12 8.06 -52.48 -0.42 1.69 16 42 H 0.14 1.51 8.06 -52.49 -0.42 1.09 16 43 H 0.20 1.73 8.06 -52.48 -0.42 1.30 16 LS Contribution 363.44 15.07 5.48 5.48 Total: -1.00 -32.43 363.44 -6.13 -38.56 By element: Atomic # 1 Polarization: 17.38 SS G_CDS: -6.19 Total: 11.19 kcal Atomic # 6 Polarization: 3.86 SS G_CDS: -1.05 Total: 2.81 kcal Atomic # 7 Polarization: -48.53 SS G_CDS: 0.07 Total: -48.47 kcal Atomic # 8 Polarization: -24.95 SS G_CDS: 0.23 Total: -24.71 kcal Atomic # 14 Polarization: 19.81 SS G_CDS: -4.67 Total: 15.15 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -32.43 -6.13 -38.56 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000604537849.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.573 kcal (2) G-P(sol) polarization free energy of solvation -32.428 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.002 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.131 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.559 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.133 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds