Wall clock time and date at job start Tue Mar 31 2020 09:18:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34236 * 116.99966 * 2 1 4 4 O 1.20827 * 120.00068 * 359.97438 * 3 2 1 5 5 C 1.50694 * 119.99780 * 180.02562 * 3 2 1 6 6 C 1.53002 * 109.46906 * 185.00862 * 5 3 2 7 7 C 1.52994 * 109.47348 * 294.52558 * 6 5 3 8 8 N 1.46897 * 109.47122 * 174.52458 * 6 5 3 9 9 C 1.46900 * 111.00181 * 184.60961 * 8 6 5 10 10 C 1.53000 * 109.47344 * 174.98973 * 9 8 6 11 11 H 1.08995 * 109.47308 * 60.00131 * 10 9 8 12 12 O 1.42899 * 109.47260 * 300.00226 * 10 9 8 13 13 C 1.50698 * 109.47437 * 180.02562 * 10 9 8 14 14 H 1.08006 * 119.99936 * 359.72258 * 13 10 9 15 15 C 1.37878 * 120.00394 * 180.02562 * 13 10 9 16 16 N 1.31512 * 119.99802 * 179.72395 * 15 13 10 17 17 Si 1.86799 * 119.99505 * 359.71995 * 15 13 10 18 18 H 1.48499 * 109.47124 * 90.00391 * 17 15 13 19 19 H 1.48507 * 109.47014 * 209.99941 * 17 15 13 20 20 H 1.48499 * 109.47505 * 329.99950 * 17 15 13 21 21 C 1.50700 * 109.47148 * 54.52544 * 6 5 3 22 22 C 1.38646 * 120.78991 * 244.85330 * 21 6 5 23 23 C 1.38206 * 119.16235 * 179.79962 * 22 21 6 24 24 N 1.31873 * 120.76317 * 0.48735 * 23 22 21 25 25 C 1.31867 * 121.72554 * 359.73812 * 24 23 22 26 26 C 1.38203 * 120.76805 * 0.02935 * 25 24 23 27 27 H 1.09007 * 109.47020 * 59.99929 * 1 2 3 28 28 H 1.08990 * 109.47184 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47126 * 300.00502 * 1 2 3 30 30 H 1.09002 * 109.47544 * 65.00834 * 5 3 2 31 31 H 1.09004 * 109.47306 * 305.00678 * 5 3 2 32 32 H 1.08999 * 109.47167 * 300.00330 * 7 6 5 33 33 H 1.09007 * 109.47241 * 59.99834 * 7 6 5 34 34 H 1.08994 * 109.47963 * 180.02562 * 7 6 5 35 35 H 1.00903 * 111.00314 * 60.66149 * 8 6 5 36 36 H 1.09003 * 109.46634 * 54.99084 * 9 8 6 37 37 H 1.09000 * 109.47249 * 294.99152 * 9 8 6 38 38 H 0.96705 * 113.99924 * 300.00189 * 12 10 9 39 39 H 0.97003 * 119.99643 * 180.02562 * 16 15 13 40 40 H 1.07997 * 120.42157 * 0.02562 * 22 21 6 41 41 H 1.08003 * 119.62069 * 180.20695 * 23 22 21 42 42 H 1.08003 * 119.61738 * 179.97438 * 25 24 23 43 43 H 1.07994 * 120.42570 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0004 2.7366 0.1255 7 6 3.5645 3.5075 -1.1220 8 7 5.4620 2.8037 0.2567 9 6 5.9068 4.1842 0.4897 10 6 7.4153 4.1978 0.7449 11 1 7.9343 3.7904 -0.1226 12 8 7.7112 3.4017 1.8941 13 6 7.8716 5.6140 0.9845 14 1 7.1578 6.4239 0.9530 15 6 9.2012 5.8764 1.2378 16 7 9.6002 7.1129 1.4414 17 14 10.4358 4.4756 1.2916 18 1 10.9946 4.2558 -0.0665 19 1 11.5348 4.8202 2.2291 20 1 9.7598 3.2374 1.7552 21 6 3.3581 3.3481 1.3439 22 6 2.4391 4.3789 1.2198 23 6 1.8674 4.9122 2.3595 24 7 2.1941 4.4582 3.5538 25 6 3.0673 3.4825 3.7097 26 6 3.6764 2.8972 2.6159 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3633 0.5139 0.8899 30 1 3.9515 0.8605 -0.9323 31 1 3.9603 0.7050 0.8409 32 1 4.0291 3.0652 -2.0033 33 1 2.4799 3.4577 -1.2195 34 1 3.8741 4.5487 -1.0326 35 1 5.9163 2.4093 -0.5533 36 1 5.3878 4.5916 1.3573 37 1 5.6812 4.7915 -0.3869 38 1 7.2818 3.7068 2.7051 39 1 10.5357 7.2976 1.6192 40 1 2.1706 4.7578 0.2448 41 1 1.1482 5.7130 2.2713 42 1 3.3101 3.1374 4.7039 43 1 4.3911 2.0988 2.7500 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000930463095.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 09:18:23 Heat of formation + Delta-G solvation = -83.950698 kcal Electronic energy + Delta-G solvation = -26656.519512 eV Core-core repulsion = 22895.615073 eV Total energy + Delta-G solvation = -3760.904439 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 308.157 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -41.15161 -39.91369 -37.87996 -36.62729 -35.66739 -32.22667 -32.11730 -31.15661 -31.06346 -28.91493 -27.80276 -27.25559 -24.54903 -23.75688 -22.91630 -21.62090 -20.44297 -19.71601 -17.88831 -17.41739 -16.89868 -16.69621 -16.18418 -15.93139 -15.49237 -15.15400 -14.85481 -14.48171 -14.24479 -14.13597 -13.70540 -13.47123 -13.33693 -13.31202 -13.14117 -12.83706 -12.67926 -12.29665 -11.98669 -11.73285 -11.53366 -11.45853 -11.20472 -11.06801 -10.98087 -10.91415 -10.53241 -10.32097 -9.93849 -9.28643 -9.24327 -9.02281 -8.85221 -8.61970 -8.32444 -8.00660 -6.12490 -4.24111 1.41900 1.48953 2.05816 2.47990 3.39027 3.49070 3.76106 4.02852 4.30623 4.44418 4.52879 4.53984 4.68964 4.83905 4.84886 4.91898 5.02242 5.17576 5.22709 5.27185 5.31822 5.38627 5.41339 5.53887 5.63166 5.74442 5.86309 5.89905 5.94942 6.01878 6.10723 6.22086 6.25513 6.29990 6.56342 6.65289 6.94235 7.21103 7.29748 7.56278 7.60566 7.69903 8.20426 8.29639 8.83923 9.09292 9.52038 10.98251 Molecular weight = 308.16amu Principal moments of inertia in cm(-1) A = 0.018627 B = 0.004232 C = 0.003852 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1502.812780 B = 6615.146015 C = 7267.099843 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.362 6.362 3 C 0.460 3.540 4 O -0.492 6.492 5 C -0.101 4.101 6 C 0.164 3.836 7 C -0.195 4.195 8 N -0.666 5.666 9 C 0.044 3.956 10 C 0.203 3.797 11 H 0.050 0.950 12 O -0.570 6.570 13 C -0.566 4.566 14 H 0.069 0.931 15 C 0.083 3.917 16 N -0.894 5.894 17 Si 0.872 3.128 18 H -0.289 1.289 19 H -0.297 1.297 20 H -0.214 1.214 21 C -0.018 4.018 22 C -0.137 4.137 23 C 0.086 3.914 24 N -0.489 5.489 25 C 0.087 3.913 26 C -0.149 4.149 27 H 0.061 0.939 28 H 0.099 0.901 29 H 0.062 0.938 30 H 0.110 0.890 31 H 0.116 0.884 32 H 0.056 0.944 33 H 0.081 0.919 34 H 0.067 0.933 35 H 0.341 0.659 36 H 0.069 0.931 37 H 0.032 0.968 38 H 0.354 0.646 39 H 0.265 0.735 40 H 0.132 0.868 41 H 0.148 0.852 42 H 0.151 0.849 43 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.189 -14.215 -3.447 22.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.279 6.279 3 C 0.303 3.697 4 O -0.379 6.379 5 C -0.139 4.139 6 C 0.072 3.928 7 C -0.254 4.254 8 N -0.296 5.296 9 C -0.084 4.084 10 C 0.145 3.855 11 H 0.068 0.932 12 O -0.375 6.375 13 C -0.603 4.603 14 H 0.088 0.912 15 C -0.121 4.121 16 N -0.531 5.531 17 Si 0.699 3.301 18 H -0.216 1.216 19 H -0.224 1.224 20 H -0.137 1.137 21 C -0.026 4.026 22 C -0.157 4.157 23 C -0.070 4.070 24 N -0.198 5.198 25 C -0.070 4.070 26 C -0.169 4.169 27 H 0.080 0.920 28 H 0.117 0.883 29 H 0.080 0.920 30 H 0.128 0.872 31 H 0.134 0.866 32 H 0.075 0.925 33 H 0.099 0.901 34 H 0.086 0.914 35 H 0.160 0.840 36 H 0.087 0.913 37 H 0.050 0.950 38 H 0.200 0.800 39 H 0.074 0.926 40 H 0.150 0.850 41 H 0.166 0.834 42 H 0.168 0.832 43 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -17.313 -13.934 -2.441 22.357 hybrid contribution 0.490 0.084 -1.389 1.475 sum -16.822 -13.851 -3.830 22.125 Atomic orbital electron populations 1.23224 0.76474 1.03494 1.02502 1.86508 1.23327 1.33708 1.84340 1.23699 0.92180 0.81334 0.72512 1.90662 1.67164 1.35742 1.44344 1.21404 0.87315 0.98612 1.06550 1.19492 0.89747 0.91466 0.92085 1.22816 1.03756 1.01710 0.97069 1.60643 1.01422 1.22531 1.45027 1.22711 0.99546 0.85997 1.00139 1.19658 0.88625 0.91009 0.86247 0.93188 1.86648 1.73717 1.57950 1.19200 1.21485 0.94903 0.92171 1.51781 0.91238 1.24994 0.98698 0.95730 0.92688 1.69964 1.16728 1.19496 1.46863 0.87014 0.79698 0.85870 0.77540 1.21587 1.22354 1.13664 1.19853 0.94277 0.94408 0.94079 1.22007 0.96961 0.96543 1.00221 1.22611 0.98216 0.98496 0.87710 1.67586 1.14080 1.11546 1.26628 1.22661 0.92870 0.92541 0.98929 1.22010 1.00328 1.02006 0.92576 0.91985 0.88275 0.91958 0.87204 0.86564 0.92491 0.90058 0.91399 0.84009 0.91264 0.94981 0.80040 0.92598 0.85020 0.83449 0.83205 0.84393 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.28 10.56 101.05 1.07 1.35 16 2 O -0.36 -3.68 10.57 -39.27 -0.41 -4.10 16 3 C 0.46 5.18 7.37 36.00 0.27 5.44 16 4 O -0.49 -6.46 11.15 -18.75 -0.21 -6.66 16 5 C -0.10 -1.03 5.00 -27.88 -0.14 -1.16 16 6 C 0.16 2.04 0.53 -132.76 -0.07 1.97 16 7 C -0.19 -2.37 6.80 37.15 0.25 -2.11 16 8 N -0.67 -9.58 5.71 -101.14 -0.58 -10.16 16 9 C 0.04 0.82 4.60 -3.82 -0.02 0.80 16 10 C 0.20 4.52 2.56 -27.88 -0.07 4.45 16 11 H 0.05 1.14 7.58 -51.93 -0.39 0.75 16 12 O -0.57 -12.48 9.99 -35.23 -0.35 -12.83 16 13 C -0.57 -15.50 9.34 -34.44 -0.32 -15.82 16 14 H 0.07 2.09 7.99 -52.48 -0.42 1.67 16 15 C 0.08 2.38 5.47 -17.82 -0.10 2.29 16 16 N -0.89 -27.30 13.96 55.43 0.77 -26.53 16 17 Si 0.87 21.61 26.99 -169.99 -4.59 17.02 16 18 H -0.29 -7.15 7.11 56.52 0.40 -6.75 16 19 H -0.30 -7.45 7.11 56.52 0.40 -7.05 16 20 H -0.21 -5.16 5.30 56.52 0.30 -4.86 16 21 C -0.02 -0.25 1.90 -104.32 -0.20 -0.44 16 22 C -0.14 -1.96 7.47 -39.44 -0.29 -2.26 16 23 C 0.09 1.25 11.18 -17.55 -0.20 1.06 16 24 N -0.49 -7.67 10.36 -13.25 -0.14 -7.80 16 25 C 0.09 1.24 11.18 -17.55 -0.20 1.04 16 26 C -0.15 -2.08 9.03 -39.44 -0.36 -2.44 16 27 H 0.06 0.45 8.13 -51.93 -0.42 0.03 16 28 H 0.10 0.48 8.14 -51.93 -0.42 0.06 16 29 H 0.06 0.50 8.13 -51.93 -0.42 0.08 16 30 H 0.11 0.89 8.14 -51.93 -0.42 0.47 16 31 H 0.12 1.13 8.04 -51.93 -0.42 0.71 16 32 H 0.06 0.61 8.14 -51.93 -0.42 0.19 16 33 H 0.08 1.00 5.09 -51.92 -0.26 0.73 16 34 H 0.07 0.92 6.26 -51.93 -0.33 0.60 16 35 H 0.34 4.55 8.79 -39.29 -0.35 4.20 16 36 H 0.07 1.38 6.56 -51.93 -0.34 1.03 16 37 H 0.03 0.60 6.68 -51.93 -0.35 0.26 16 38 H 0.35 7.19 9.04 45.56 0.41 7.60 16 39 H 0.26 7.61 8.31 -40.82 -0.34 7.27 16 40 H 0.13 1.76 6.08 -52.49 -0.32 1.44 16 41 H 0.15 1.78 8.06 -52.48 -0.42 1.36 16 42 H 0.15 1.76 8.06 -52.48 -0.42 1.34 16 43 H 0.14 1.79 8.06 -52.49 -0.42 1.37 16 LS Contribution 346.51 15.07 5.22 5.22 Total: -1.00 -33.16 346.51 -6.04 -39.19 By element: Atomic # 1 Polarization: 17.88 SS G_CDS: -5.38 Total: 12.50 kcal Atomic # 6 Polarization: -5.48 SS G_CDS: -0.37 Total: -5.85 kcal Atomic # 7 Polarization: -44.55 SS G_CDS: 0.06 Total: -44.49 kcal Atomic # 8 Polarization: -22.62 SS G_CDS: -0.98 Total: -23.60 kcal Atomic # 14 Polarization: 21.61 SS G_CDS: -4.59 Total: 17.02 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -33.16 -6.04 -39.19 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000930463095.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.759 kcal (2) G-P(sol) polarization free energy of solvation -33.155 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.915 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.036 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.191 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.951 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds