Wall clock time and date at job start Tue Mar 31 2020 10:31:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42893 * 109.47462 * 2 1 4 4 C 1.35994 * 117.00139 * 179.97438 * 3 2 1 5 5 C 1.38566 * 120.07374 * 0.02614 * 4 3 2 6 6 C 1.38244 * 119.99897 * 179.70229 * 5 4 3 7 7 C 1.38258 * 120.14309 * 0.55108 * 6 5 4 8 8 C 1.50700 * 119.92241 * 179.72664 * 7 6 5 9 9 N 1.46498 * 109.46769 * 269.71911 * 8 7 6 10 10 C 1.34777 * 119.99828 * 179.72341 * 9 8 7 11 11 O 1.21593 * 119.99949 * 0.28071 * 10 9 8 12 12 N 1.34777 * 120.00128 * 180.27942 * 10 9 8 13 13 C 1.46499 * 120.00065 * 180.02562 * 12 10 9 14 14 C 1.50703 * 109.47138 * 179.97438 * 13 12 10 15 15 H 1.08001 * 120.00043 * 0.02562 * 14 13 12 16 16 C 1.37875 * 120.00213 * 179.97438 * 14 13 12 17 17 N 1.31520 * 119.99609 * 0.02562 * 16 14 13 18 18 Si 1.86799 * 120.00201 * 180.02562 * 16 14 13 19 19 H 1.48499 * 109.47136 * 90.00100 * 18 16 14 20 20 H 1.48500 * 109.46954 * 210.00202 * 18 16 14 21 21 H 1.48499 * 109.47078 * 330.00388 * 18 16 14 22 22 C 1.38236 * 120.14919 * 359.44412 * 7 6 5 23 23 C 1.38569 * 119.99808 * 0.28047 * 22 7 6 24 24 O 1.35995 * 120.07197 * 179.97438 * 23 22 7 25 25 C 1.42904 * 117.00124 * 0.02562 * 24 23 22 26 26 H 1.08996 * 109.47444 * 179.97438 * 1 2 3 27 27 H 1.09002 * 109.47385 * 299.99957 * 1 2 3 28 28 H 1.09001 * 109.47004 * 59.99766 * 1 2 3 29 29 H 1.09006 * 109.46907 * 240.00178 * 2 1 3 30 30 H 1.09001 * 109.47004 * 120.00234 * 2 1 3 31 31 H 1.07997 * 119.99616 * 0.02562 * 5 4 3 32 32 H 1.07995 * 119.92626 * 180.29386 * 6 5 4 33 33 H 1.09004 * 109.47210 * 149.72269 * 8 7 6 34 34 H 1.08994 * 109.47121 * 29.72239 * 8 7 6 35 35 H 0.97001 * 120.00384 * 0.02562 * 9 8 7 36 36 H 0.97000 * 119.99549 * 359.97438 * 12 10 9 37 37 H 1.09000 * 109.47602 * 299.99940 * 13 12 10 38 38 H 1.09006 * 109.46868 * 59.99976 * 13 12 10 39 39 H 0.96997 * 119.99506 * 180.02562 * 17 16 14 40 40 H 1.08000 * 120.00024 * 180.25651 * 22 7 6 41 41 H 1.08997 * 109.46799 * 299.99833 * 25 24 23 42 42 H 1.09004 * 109.46890 * 59.99836 * 25 24 23 43 43 H 1.08994 * 109.46980 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 3.3546 1.5253 0.0005 5 6 4.2000 0.4275 0.0005 6 6 5.5703 0.6103 -0.0052 7 6 6.1004 1.8873 0.0007 8 6 7.5949 2.0808 0.0007 9 7 8.0791 2.1436 1.3819 10 6 9.3939 2.3082 1.6283 11 8 10.1775 2.4097 0.7041 12 7 9.8401 2.3602 2.8990 13 6 11.2692 2.5397 3.1667 14 6 11.5021 2.5648 4.6554 15 1 10.6690 2.4573 5.3342 16 6 12.7789 2.7239 5.1509 17 7 13.7935 2.8542 4.3242 18 14 13.0677 2.7542 6.9962 19 1 13.3190 1.3732 7.4806 20 1 14.2451 3.6070 7.2989 21 1 11.8684 3.3066 7.6758 22 6 5.2626 2.9868 0.0006 23 6 3.8881 2.8105 0.0006 24 8 3.0625 3.8912 0.0011 25 6 3.6803 5.1797 0.0010 26 1 -0.3634 -1.0276 -0.0005 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 1.8933 -0.5138 -0.8901 30 1 1.8933 -0.5139 0.8900 31 1 3.7884 -0.5710 -0.0004 32 1 6.2282 -0.2461 -0.0100 33 1 7.8409 3.0101 -0.5131 34 1 8.0695 1.2449 -0.5131 35 1 7.4540 2.0622 2.1192 36 1 9.2149 2.2796 3.6362 37 1 11.8281 1.7147 2.7250 38 1 11.6051 3.4807 2.7308 39 1 14.6917 2.9658 4.6728 40 1 5.6792 3.9832 0.0010 41 1 4.3010 5.2850 0.8908 42 1 4.3005 5.2853 -0.8892 43 1 2.9108 5.9516 0.0010 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000426435909.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:31:51 Heat of formation + Delta-G solvation = -86.153510 kcal Electronic energy + Delta-G solvation = -24335.443529 eV Core-core repulsion = 20574.443569 eV Total energy + Delta-G solvation = -3760.999960 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 308.157 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -40.86528 -39.19356 -38.78346 -37.48354 -34.51586 -33.90361 -32.38718 -32.10297 -30.68715 -30.08948 -27.85576 -27.07968 -25.34136 -24.16199 -22.53460 -21.98687 -21.34929 -20.14564 -18.83673 -18.13915 -17.30413 -16.84063 -16.56099 -16.07420 -15.76293 -15.62099 -15.04434 -14.89911 -14.62428 -14.53552 -14.24838 -13.63061 -13.59603 -13.40869 -13.10426 -12.91609 -12.66812 -12.32994 -12.18503 -12.13408 -11.93589 -11.63251 -11.37996 -11.30187 -11.24065 -11.03190 -10.93751 -10.86584 -10.28409 -9.44356 -9.34827 -8.96669 -8.76097 -8.65195 -8.03405 -7.72813 -6.13467 -4.19818 0.98450 1.14101 2.87239 3.02721 3.24010 3.26022 3.32294 3.34976 3.74182 3.98086 4.35144 4.45650 4.49862 4.55089 4.65599 4.77920 4.84516 4.87863 4.95985 5.04646 5.10077 5.18590 5.22450 5.22691 5.29225 5.39210 5.41072 5.61004 5.65441 5.81090 5.90677 6.00250 6.37732 6.42426 6.79736 6.86661 7.15242 7.32135 7.54476 7.58162 7.59811 7.93697 8.07163 8.79070 8.97337 9.35958 9.50651 10.96772 Molecular weight = 308.16amu Principal moments of inertia in cm(-1) A = 0.020185 B = 0.002289 C = 0.002257 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1386.848351 B =12229.106815 C =12404.609344 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.053 3.947 3 O -0.306 6.306 4 C 0.105 3.895 5 C -0.176 4.176 6 C -0.095 4.095 7 C -0.098 4.098 8 C 0.185 3.815 9 N -0.754 5.754 10 C 0.693 3.307 11 O -0.602 6.602 12 N -0.730 5.730 13 C 0.267 3.733 14 C -0.541 4.541 15 H 0.062 0.938 16 C 0.063 3.937 17 N -0.885 5.885 18 Si 0.904 3.096 19 H -0.279 1.279 20 H -0.285 1.285 21 H -0.273 1.273 22 C -0.152 4.152 23 C 0.095 3.905 24 O -0.308 6.308 25 C 0.025 3.975 26 H 0.077 0.923 27 H 0.066 0.934 28 H 0.066 0.934 29 H 0.061 0.939 30 H 0.062 0.938 31 H 0.135 0.865 32 H 0.131 0.869 33 H 0.070 0.930 34 H 0.072 0.928 35 H 0.392 0.608 36 H 0.386 0.614 37 H 0.025 0.975 38 H 0.024 0.976 39 H 0.265 0.735 40 H 0.138 0.862 41 H 0.057 0.943 42 H 0.056 0.944 43 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -26.769 -3.361 -9.261 28.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.023 4.023 3 O -0.220 6.220 4 C 0.059 3.941 5 C -0.194 4.194 6 C -0.114 4.114 7 C -0.099 4.099 8 C 0.061 3.939 9 N -0.412 5.412 10 C 0.392 3.608 11 O -0.481 6.481 12 N -0.382 5.382 13 C 0.146 3.854 14 C -0.580 4.580 15 H 0.080 0.920 16 C -0.141 4.141 17 N -0.523 5.523 18 Si 0.731 3.269 19 H -0.205 1.205 20 H -0.210 1.210 21 H -0.198 1.198 22 C -0.171 4.171 23 C 0.050 3.950 24 O -0.222 6.222 25 C -0.070 4.070 26 H 0.096 0.904 27 H 0.085 0.915 28 H 0.085 0.915 29 H 0.079 0.921 30 H 0.080 0.920 31 H 0.153 0.847 32 H 0.149 0.851 33 H 0.088 0.912 34 H 0.091 0.909 35 H 0.225 0.775 36 H 0.218 0.782 37 H 0.043 0.957 38 H 0.042 0.958 39 H 0.075 0.925 40 H 0.156 0.844 41 H 0.075 0.925 42 H 0.074 0.926 43 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -26.132 -3.069 -10.121 28.191 hybrid contribution -0.005 -0.150 1.668 1.675 sum -26.137 -3.218 -8.453 27.657 Atomic orbital electron populations 1.21760 0.92725 1.02761 1.03597 1.22797 0.95970 0.82147 1.01347 1.86166 1.18147 1.28839 1.88890 1.18239 0.83080 0.91169 1.01601 1.21059 0.93898 0.97440 1.07034 1.20854 0.94155 0.96921 0.99460 1.19677 0.95291 0.92646 1.02271 1.19844 0.87738 1.02617 0.83689 1.45207 1.07128 1.81257 1.07588 1.16158 0.81589 0.78458 0.84560 1.90874 1.54823 1.58655 1.43740 1.45718 1.12096 1.76225 1.04120 1.18978 0.73483 0.97219 0.95748 1.21233 0.93573 1.52058 0.91096 0.91968 1.24952 0.95763 0.94833 0.98554 1.69984 0.99522 1.48228 1.34553 0.86410 0.77884 0.78050 0.84509 1.20494 1.21031 1.19802 1.21043 0.90779 1.00235 1.05064 1.18212 0.88894 0.85426 1.02462 1.86160 1.33837 1.13061 1.89096 1.23093 0.99861 0.82498 1.01562 0.90402 0.91481 0.91530 0.92074 0.92016 0.84705 0.85116 0.91194 0.90949 0.77481 0.78170 0.95740 0.95756 0.92489 0.84410 0.92457 0.92580 0.88218 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.83 10.28 37.16 0.38 -0.45 16 2 C 0.05 0.37 5.46 37.16 0.20 0.58 16 3 O -0.31 -3.36 9.92 -34.22 -0.34 -3.70 16 4 C 0.10 1.18 6.70 -39.12 -0.26 0.92 16 5 C -0.18 -1.68 9.04 -39.46 -0.36 -2.03 16 6 C -0.10 -0.96 9.69 -39.57 -0.38 -1.34 16 7 C -0.10 -1.09 5.25 -104.62 -0.55 -1.64 16 8 C 0.19 2.47 5.80 -5.19 -0.03 2.44 16 9 N -0.75 -11.49 5.55 -66.41 -0.37 -11.86 16 10 C 0.69 14.47 8.57 -86.92 -0.74 13.73 16 11 O -0.60 -15.19 16.34 5.28 0.09 -15.10 16 12 N -0.73 -15.85 5.55 -66.41 -0.37 -16.22 16 13 C 0.27 7.23 5.43 -5.19 -0.03 7.20 16 14 C -0.54 -14.86 9.28 -34.44 -0.32 -15.18 16 15 H 0.06 1.60 7.60 -52.49 -0.40 1.20 16 16 C 0.06 1.75 5.46 -17.82 -0.10 1.65 16 17 N -0.89 -26.31 13.29 55.43 0.74 -25.57 16 18 Si 0.90 21.01 29.54 -169.99 -5.02 15.98 16 19 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 20 H -0.28 -6.58 7.11 56.52 0.40 -6.17 16 21 H -0.27 -6.17 7.11 56.52 0.40 -5.76 16 22 C -0.15 -1.64 8.69 -39.46 -0.34 -1.99 16 23 C 0.10 1.11 6.70 -39.12 -0.26 0.85 16 24 O -0.31 -3.54 10.28 -34.23 -0.35 -3.89 16 25 C 0.02 0.19 9.81 101.05 0.99 1.18 16 26 H 0.08 0.27 8.14 -51.93 -0.42 -0.15 16 27 H 0.07 0.39 8.14 -51.93 -0.42 -0.03 16 28 H 0.07 0.38 8.14 -51.93 -0.42 -0.04 16 29 H 0.06 0.36 7.66 -51.93 -0.40 -0.03 16 30 H 0.06 0.38 7.66 -51.93 -0.40 -0.02 16 31 H 0.14 0.96 6.30 -52.49 -0.33 0.63 16 32 H 0.13 1.16 8.06 -52.49 -0.42 0.74 16 33 H 0.07 0.96 8.08 -51.93 -0.42 0.55 16 34 H 0.07 0.99 8.08 -51.93 -0.42 0.57 16 35 H 0.39 5.02 8.48 -40.82 -0.35 4.68 16 36 H 0.39 7.20 8.34 -40.82 -0.34 6.86 16 37 H 0.02 0.73 8.14 -51.93 -0.42 0.31 16 38 H 0.02 0.73 8.14 -51.93 -0.42 0.30 16 39 H 0.27 7.38 8.31 -40.82 -0.34 7.04 16 40 H 0.14 1.33 6.30 -52.49 -0.33 1.00 16 41 H 0.06 0.42 7.66 -51.93 -0.40 0.02 16 42 H 0.06 0.38 7.66 -51.93 -0.40 -0.01 16 43 H 0.10 0.57 8.14 -51.93 -0.42 0.15 16 LS Contribution 366.99 15.07 5.53 5.53 Total: -1.00 -34.91 366.99 -8.17 -43.07 By element: Atomic # 1 Polarization: 12.11 SS G_CDS: -6.27 Total: 5.84 kcal Atomic # 6 Polarization: 7.71 SS G_CDS: -1.80 Total: 5.92 kcal Atomic # 7 Polarization: -53.64 SS G_CDS: 0.00 Total: -53.65 kcal Atomic # 8 Polarization: -22.09 SS G_CDS: -0.61 Total: -22.70 kcal Atomic # 14 Polarization: 21.01 SS G_CDS: -5.02 Total: 15.98 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -34.91 -8.17 -43.07 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000426435909.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.080 kcal (2) G-P(sol) polarization free energy of solvation -34.906 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.986 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.167 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.073 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.154 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds