Wall clock time and date at job start Tue Mar 31 2020 10:34:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 O 1.42900 * 109.46748 * 2 1 4 4 C 1.35730 * 116.99934 * 180.02562 * 3 2 1 5 5 C 1.41853 * 126.79074 * 179.97438 * 4 3 2 6 6 C 1.36662 * 103.81471 * 179.97438 * 5 4 3 7 7 C 1.47539 * 126.87935 * 179.97438 * 6 5 4 8 8 O 1.21575 * 120.00292 * 353.41812 * 7 6 5 9 9 N 1.34775 * 119.99909 * 173.69225 * 7 6 5 10 10 C 1.46931 * 120.62964 * 3.68568 * 9 7 6 11 11 C 1.52767 * 109.00721 * 233.58436 * 10 9 7 12 12 C 1.53036 * 109.38361 * 305.59002 * 11 10 9 13 13 C 1.53000 * 109.44709 * 181.25355 * 12 11 10 14 14 C 1.50701 * 109.47039 * 64.93966 * 13 12 11 15 15 H 1.07998 * 119.99875 * 359.97438 * 14 13 12 16 16 C 1.37880 * 120.00007 * 180.02562 * 14 13 12 17 17 N 1.31516 * 119.99775 * 359.97438 * 16 14 13 18 18 Si 1.86800 * 119.99927 * 180.02562 * 16 14 13 19 19 H 1.48504 * 109.47224 * 359.97438 * 18 16 14 20 20 H 1.48502 * 109.47107 * 119.99491 * 18 16 14 21 21 H 1.48493 * 109.47131 * 239.99448 * 18 16 14 22 22 C 1.53041 * 109.53972 * 61.24236 * 12 11 10 23 23 C 1.46925 * 120.63093 * 183.97337 * 9 7 6 24 24 O 1.34664 * 106.24039 * 0.26690 * 6 5 4 25 25 N 1.20880 * 111.63029 * 359.51777 * 24 6 5 26 26 H 1.09002 * 109.46577 * 60.00669 * 1 2 3 27 27 H 1.08995 * 109.47102 * 180.02562 * 1 2 3 28 28 H 1.08996 * 109.47384 * 300.00691 * 1 2 3 29 29 H 1.08991 * 109.47415 * 239.99812 * 2 1 3 30 30 H 1.09002 * 109.46577 * 119.99331 * 2 1 3 31 31 H 1.07998 * 128.08997 * 359.94624 * 5 4 3 32 32 H 1.08991 * 109.58544 * 353.42166 * 10 9 7 33 33 H 1.09000 * 109.58021 * 113.85090 * 10 9 7 34 34 H 1.08997 * 109.56157 * 185.55485 * 11 10 9 35 35 H 1.09000 * 109.35599 * 65.50667 * 11 10 9 36 36 H 1.09001 * 109.46326 * 301.21927 * 12 11 10 37 37 H 1.08998 * 109.47416 * 184.93995 * 13 12 11 38 38 H 1.09001 * 109.47465 * 304.94105 * 13 12 11 39 39 H 0.97002 * 119.99153 * 180.02562 * 17 16 14 40 40 H 1.09001 * 109.50029 * 178.68164 * 22 12 11 41 41 H 1.09003 * 109.52359 * 58.59704 * 22 12 11 42 42 H 1.09010 * 109.58400 * 246.15078 * 23 9 7 43 43 H 1.09000 * 109.58766 * 6.43295 * 23 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.3519 1.5252 -0.0005 5 6 4.0452 2.7628 -0.0012 6 6 5.3625 2.3988 -0.0009 7 6 6.5302 3.3006 -0.0019 8 8 6.3721 4.4999 -0.1237 9 7 7.7727 2.7944 0.1267 10 6 7.9866 1.3420 0.1878 11 6 8.7974 1.0108 1.4395 12 6 10.0856 1.8370 1.4436 13 6 10.9136 1.4835 2.6807 14 6 11.3598 0.0467 2.5927 15 1 11.0805 -0.5542 1.7399 16 6 12.1239 -0.5008 3.6013 17 7 12.4637 0.2309 4.6400 18 14 12.6777 -2.2815 3.4919 19 1 12.1676 -2.8821 2.2331 20 1 14.1615 -2.3400 3.5030 21 1 12.1437 -3.0382 4.6527 22 6 9.7379 3.3271 1.4716 23 6 8.9383 3.6845 0.2148 24 8 5.3812 1.0523 -0.0063 25 7 4.2639 0.5912 -0.0001 26 1 -0.3632 0.5138 -0.8901 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8899 29 1 1.8934 -0.5138 -0.8899 30 1 1.8933 -0.5138 0.8901 31 1 3.6293 3.7594 -0.0021 32 1 7.0242 0.8325 0.2321 33 1 8.5348 1.0160 -0.6961 34 1 9.0459 -0.0505 1.4431 35 1 8.2088 1.2501 2.3251 36 1 10.6620 1.6155 0.5454 37 1 11.7875 2.1329 2.7308 38 1 10.3068 1.6212 3.5756 39 1 13.0015 -0.1544 5.3494 40 1 10.6557 3.9145 1.4982 41 1 9.1406 3.5452 2.3570 42 1 9.5656 3.5533 -0.6670 43 1 8.6035 4.7201 0.2743 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000570634094.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:34:19 Heat of formation + Delta-G solvation = -9.899698 kcal Electronic energy + Delta-G solvation = -25424.993157 eV Core-core repulsion = 21667.299810 eV Total energy + Delta-G solvation = -3757.693347 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 308.157 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -45.18491 -40.11205 -39.26186 -37.56583 -34.27649 -33.69453 -32.59931 -31.92688 -31.51467 -30.63161 -28.21223 -25.48767 -24.25459 -23.77272 -23.07572 -22.84029 -21.50218 -20.70059 -19.39959 -18.17708 -18.11644 -17.26670 -16.44004 -16.26355 -16.18806 -15.89471 -15.12970 -14.84767 -14.56287 -14.18027 -13.94897 -13.73406 -13.44353 -13.20728 -13.08801 -13.04681 -12.80599 -12.29527 -12.12003 -11.87571 -11.54234 -11.50093 -11.22713 -11.03621 -10.82349 -10.75429 -10.52125 -10.28455 -10.13450 -10.05577 -9.68396 -9.55027 -9.32808 -8.99501 -8.54683 -8.37296 -6.01911 -4.03860 0.59018 1.89853 2.31460 2.38189 2.85240 3.14216 3.29278 3.37510 3.40308 3.84357 4.29621 4.43926 4.52381 4.53301 4.61885 4.84790 4.93370 5.16513 5.24614 5.30384 5.32946 5.35915 5.39192 5.44273 5.45100 5.60382 5.61944 5.80841 5.93071 6.01122 6.24510 6.32260 6.45551 6.55574 6.69909 6.89542 6.94826 7.06565 7.22703 7.64639 7.75026 7.78300 7.97445 7.97703 8.39752 9.02901 9.60290 11.09360 Molecular weight = 308.16amu Principal moments of inertia in cm(-1) A = 0.015524 B = 0.003175 C = 0.002727 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1803.222048 B = 8815.889851 C =10266.028290 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.057 3.943 3 O -0.282 6.282 4 C 0.208 3.792 5 C -0.157 4.157 6 C -0.050 4.050 7 C 0.600 3.400 8 O -0.521 6.521 9 N -0.586 5.586 10 C 0.089 3.911 11 C -0.119 4.119 12 C -0.082 4.082 13 C 0.027 3.973 14 C -0.516 4.516 15 H 0.057 0.943 16 C 0.056 3.944 17 N -0.895 5.895 18 Si 0.888 3.112 19 H -0.272 1.272 20 H -0.285 1.285 21 H -0.285 1.285 22 C -0.131 4.131 23 C 0.113 3.887 24 O 0.118 5.882 25 N -0.394 5.394 26 H 0.067 0.933 27 H 0.082 0.918 28 H 0.068 0.932 29 H 0.067 0.933 30 H 0.068 0.932 31 H 0.189 0.811 32 H 0.096 0.904 33 H 0.076 0.924 34 H 0.089 0.911 35 H 0.060 0.940 36 H 0.061 0.939 37 H 0.017 0.983 38 H 0.016 0.984 39 H 0.259 0.741 40 H 0.075 0.925 41 H 0.063 0.937 42 H 0.072 0.928 43 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.798 2.633 -10.783 21.831 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.018 4.018 3 O -0.189 6.189 4 C 0.011 3.989 5 C -0.180 4.180 6 C -0.115 4.115 7 C 0.384 3.616 8 O -0.398 6.398 9 N -0.318 5.318 10 C -0.033 4.033 11 C -0.157 4.157 12 C -0.101 4.101 13 C -0.010 4.010 14 C -0.554 4.554 15 H 0.075 0.925 16 C -0.145 4.145 17 N -0.535 5.535 18 Si 0.716 3.284 19 H -0.197 1.197 20 H -0.211 1.211 21 H -0.211 1.211 22 C -0.169 4.169 23 C -0.009 4.009 24 O 0.056 5.944 25 N -0.121 5.121 26 H 0.086 0.914 27 H 0.101 0.899 28 H 0.087 0.913 29 H 0.085 0.915 30 H 0.086 0.914 31 H 0.206 0.794 32 H 0.114 0.886 33 H 0.095 0.905 34 H 0.108 0.892 35 H 0.078 0.922 36 H 0.079 0.921 37 H 0.035 0.965 38 H 0.034 0.966 39 H 0.069 0.931 40 H 0.093 0.907 41 H 0.081 0.919 42 H 0.090 0.910 43 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -19.055 2.142 -10.687 21.952 hybrid contribution 0.194 -0.600 0.168 0.653 sum -18.860 1.541 -10.519 21.650 Atomic orbital electron populations 1.21798 0.92134 1.03257 1.03661 1.22851 0.95897 0.80478 1.02614 1.86208 1.13013 1.30364 1.89325 1.21791 0.85815 0.90414 1.00897 1.22140 0.90023 0.99236 1.06605 1.24092 0.96533 0.84313 1.06591 1.16616 0.80950 0.85883 0.78113 1.90845 1.84532 1.13330 1.51096 1.48141 1.05520 1.08880 1.69216 1.22412 1.01984 0.78190 1.00733 1.21837 0.96163 1.02363 0.95289 1.21225 0.95651 0.91411 1.01800 1.19128 0.94224 0.96349 0.91275 1.21272 1.32021 0.96789 1.05336 0.92478 1.25026 0.96271 0.97674 0.95527 1.69975 1.37991 1.36086 1.09409 0.86594 0.78407 0.85357 0.77994 1.19703 1.21107 1.21117 1.22059 0.99560 0.98874 0.96386 1.21840 0.85480 0.94156 0.99389 1.85130 1.21950 1.18679 1.68658 1.73995 0.90954 1.22719 1.24455 0.91367 0.89906 0.91309 0.91484 0.91383 0.79376 0.88640 0.90533 0.89234 0.92167 0.92088 0.96505 0.96597 0.93099 0.90658 0.91857 0.90950 0.89223 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.88 10.28 37.16 0.38 -0.50 16 2 C 0.06 0.48 6.38 37.16 0.24 0.72 16 3 O -0.28 -3.16 10.21 -18.90 -0.19 -3.35 16 4 C 0.21 2.60 8.00 -16.72 -0.13 2.46 16 5 C -0.16 -1.89 10.97 -38.77 -0.43 -2.32 16 6 C -0.05 -0.65 6.98 -36.36 -0.25 -0.91 16 7 C 0.60 8.68 7.69 -12.47 -0.10 8.58 16 8 O -0.52 -8.55 16.34 5.30 0.09 -8.47 16 9 N -0.59 -8.22 2.98 -174.25 -0.52 -8.74 16 10 C 0.09 1.21 6.30 -3.93 -0.02 1.19 16 11 C -0.12 -1.98 5.17 -26.83 -0.14 -2.12 16 12 C -0.08 -1.51 2.10 -90.58 -0.19 -1.70 16 13 C 0.03 0.66 4.45 -27.88 -0.12 0.53 16 14 C -0.52 -13.69 8.39 -34.44 -0.29 -13.98 16 15 H 0.06 1.46 7.05 -52.49 -0.37 1.09 16 16 C 0.06 1.55 5.46 -17.82 -0.10 1.46 16 17 N -0.90 -26.29 13.29 55.43 0.74 -25.55 16 18 Si 0.89 21.06 29.54 -169.99 -5.02 16.04 16 19 H -0.27 -6.27 7.11 56.52 0.40 -5.87 16 20 H -0.28 -6.74 7.11 56.52 0.40 -6.34 16 21 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 22 C -0.13 -2.05 5.36 -26.61 -0.14 -2.19 16 23 C 0.11 1.53 6.42 -3.71 -0.02 1.51 16 24 O 0.12 1.56 7.74 15.49 0.12 1.68 16 25 N -0.39 -5.25 11.50 30.47 0.35 -4.90 16 26 H 0.07 0.38 8.14 -51.93 -0.42 -0.04 16 27 H 0.08 0.34 8.14 -51.93 -0.42 -0.08 16 28 H 0.07 0.40 8.14 -51.93 -0.42 -0.02 16 29 H 0.07 0.56 8.14 -51.93 -0.42 0.13 16 30 H 0.07 0.59 8.14 -51.93 -0.42 0.16 16 31 H 0.19 1.90 8.06 -52.49 -0.42 1.47 16 32 H 0.10 1.24 3.83 -54.72 -0.21 1.03 16 33 H 0.08 0.95 8.14 -51.93 -0.42 0.53 16 34 H 0.09 1.60 6.91 -51.93 -0.36 1.24 16 35 H 0.06 1.06 8.14 -51.93 -0.42 0.63 16 36 H 0.06 1.11 8.14 -51.93 -0.42 0.69 16 37 H 0.02 0.43 8.14 -51.93 -0.42 0.01 16 38 H 0.02 0.41 8.14 -51.93 -0.42 -0.01 16 39 H 0.26 7.21 8.31 -40.82 -0.34 6.87 16 40 H 0.07 1.13 8.14 -51.93 -0.42 0.71 16 41 H 0.06 1.04 8.14 -51.93 -0.42 0.62 16 42 H 0.07 0.89 8.14 -51.92 -0.42 0.46 16 43 H 0.09 1.21 7.03 -51.93 -0.36 0.84 16 LS Contribution 353.91 15.07 5.33 5.33 Total: -1.00 -30.66 353.91 -6.78 -37.44 By element: Atomic # 1 Polarization: 4.15 SS G_CDS: -6.36 Total: -2.20 kcal Atomic # 6 Polarization: -5.95 SS G_CDS: -1.32 Total: -7.27 kcal Atomic # 7 Polarization: -39.76 SS G_CDS: 0.57 Total: -39.20 kcal Atomic # 8 Polarization: -10.16 SS G_CDS: 0.01 Total: -10.14 kcal Atomic # 14 Polarization: 21.06 SS G_CDS: -5.02 Total: 16.04 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -30.66 -6.78 -37.44 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000570634094.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.541 kcal (2) G-P(sol) polarization free energy of solvation -30.658 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.116 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.783 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.441 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.900 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds