Wall clock time and date at job start Tue Mar 31 2020 09:37:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 N 1.46499 * 109.47031 * 2 1 4 4 C 1.34777 * 119.99762 * 276.78185 * 3 2 1 5 5 O 1.21286 * 120.00057 * 179.97438 * 4 3 2 6 6 C 1.50700 * 120.00397 * 359.97438 * 4 3 2 7 7 N 1.46499 * 109.47303 * 180.02562 * 6 4 3 8 8 C 1.46496 * 120.00018 * 90.00370 * 7 6 4 9 9 C 1.36932 * 119.99993 * 269.99717 * 7 6 4 10 10 H 1.08002 * 120.00083 * 23.12959 * 9 7 6 11 11 C 1.38816 * 120.00453 * 203.12370 * 9 7 6 12 12 N 1.31617 * 119.99429 * 10.90762 * 11 9 7 13 13 Si 1.86797 * 120.00351 * 190.90571 * 11 9 7 14 14 H 1.48497 * 109.47083 * 359.97438 * 13 11 9 15 15 H 1.48494 * 109.47041 * 120.00041 * 13 11 9 16 16 H 1.48504 * 109.46764 * 240.00111 * 13 11 9 17 17 C 1.46497 * 119.99991 * 96.78167 * 3 2 1 18 18 H 1.09009 * 109.46985 * 199.28316 * 17 3 2 19 19 C 1.52996 * 109.47099 * 319.28086 * 17 3 2 20 20 C 1.50701 * 109.47121 * 79.28690 * 17 3 2 21 21 C 1.38239 * 119.97480 * 134.35070 * 20 17 3 22 22 C 1.38196 * 120.02697 * 179.97438 * 21 20 17 23 23 C 1.38467 * 119.97255 * 0.02562 * 22 21 20 24 24 F 1.35097 * 120.02356 * 179.97438 * 23 22 21 25 25 C 1.38454 * 119.94499 * 0.24601 * 23 22 21 26 26 C 1.38196 * 119.97718 * 359.51903 * 25 23 22 27 27 H 1.09004 * 109.46781 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.46990 * 299.99681 * 1 2 3 29 29 H 1.08992 * 109.47443 * 60.00399 * 1 2 3 30 30 H 1.09004 * 109.46857 * 239.99924 * 2 1 3 31 31 H 1.08994 * 109.47388 * 120.00139 * 2 1 3 32 32 H 1.08998 * 109.47014 * 299.99857 * 6 4 3 33 33 H 1.08997 * 109.46959 * 59.99854 * 6 4 3 34 34 H 1.08996 * 109.47606 * 86.81133 * 8 7 6 35 35 H 1.09007 * 109.47103 * 206.81551 * 8 7 6 36 36 H 1.09002 * 109.46965 * 326.81127 * 8 7 6 37 37 H 0.97001 * 120.00196 * 180.02562 * 12 11 9 38 38 H 1.09000 * 109.47147 * 60.00397 * 19 17 3 39 39 H 1.09001 * 109.46977 * 180.02562 * 19 17 3 40 40 H 1.09001 * 109.47691 * 300.00041 * 19 17 3 41 41 H 1.08004 * 119.99095 * 0.02562 * 21 20 17 42 42 H 1.08004 * 120.01596 * 180.02562 * 22 21 20 43 43 H 1.08010 * 120.00754 * 179.74718 * 25 23 22 44 44 H 1.08005 * 119.98980 * 180.25098 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.1129 2.0625 -1.1591 5 8 2.5168 3.2061 -1.1591 6 6 1.7170 1.4033 -2.4551 7 7 1.9108 2.3445 -3.5609 8 6 3.1956 2.3951 -4.2631 9 6 0.8911 3.1768 -3.9382 10 1 0.1073 3.4228 -3.2371 11 6 0.8648 3.7047 -5.2218 12 7 1.6886 3.2448 -6.1394 13 14 -0.3399 5.0676 -5.6468 14 1 -1.1502 5.4034 -4.4486 15 1 0.4097 6.2700 -6.0910 16 1 -1.2373 4.6122 -6.7389 17 6 2.4037 2.0219 1.2598 18 1 2.4076 3.1043 1.1307 19 6 1.4022 1.6422 2.3523 20 6 3.7813 1.5586 1.6581 21 6 4.7208 2.4764 2.0894 22 6 5.9843 2.0528 2.4554 23 6 6.3092 0.7084 2.3894 24 9 7.5442 0.2931 2.7465 25 6 5.3692 -0.2092 1.9519 26 6 4.1048 0.2163 1.5911 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5137 -0.8899 30 1 1.8933 -0.5139 -0.8900 31 1 1.8934 -0.5138 0.8899 32 1 2.3353 0.5204 -2.6174 33 1 0.6687 1.1089 -2.4076 34 1 3.2005 1.6573 -5.0654 35 1 3.3408 3.3902 -4.6837 36 1 4.0013 2.1755 -3.5626 37 1 1.6706 3.6138 -7.0363 38 1 1.3983 0.5599 2.4815 39 1 1.6887 2.1192 3.2896 40 1 0.4057 1.9773 2.0643 41 1 4.4670 3.5250 2.1412 42 1 6.7180 2.7699 2.7928 43 1 5.6228 -1.2576 1.8962 44 1 3.3701 -0.4999 1.2536 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000075828551.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 09:37:39 Heat of formation + Delta-G solvation = -18.610603 kcal Electronic energy + Delta-G solvation = -26076.399396 eV Core-core repulsion = 22330.701106 eV Total energy + Delta-G solvation = -3745.698290 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 308.164 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -48.99443 -40.22562 -38.61722 -36.14926 -34.98663 -32.92736 -31.28658 -31.09753 -29.87593 -29.10617 -27.05731 -25.75208 -24.15089 -23.41442 -22.68737 -21.91559 -20.60592 -18.73115 -17.72813 -16.94917 -16.74608 -16.26679 -16.12850 -15.69468 -15.40517 -14.78355 -14.61227 -14.23662 -13.82018 -13.71868 -13.50980 -13.45088 -13.16298 -13.12641 -12.88597 -12.55763 -12.43820 -12.21367 -12.01190 -11.67266 -11.50996 -11.26297 -11.17259 -10.95995 -10.83726 -10.80582 -10.55523 -10.28893 -9.92633 -9.88706 -9.22610 -9.15654 -8.68701 -8.45265 -8.36240 -6.74021 -5.71775 -3.15763 1.00981 1.11903 3.21702 3.38767 3.41422 3.48141 3.51044 3.58450 4.13731 4.53142 4.55086 4.58524 4.74701 4.88577 4.94733 5.14223 5.19363 5.25435 5.31083 5.39111 5.47214 5.48902 5.56571 5.60746 5.73137 5.79877 5.84108 5.88859 5.96157 6.00174 6.04360 6.13809 6.17728 6.21662 6.41706 6.44532 6.76980 6.86192 6.90866 7.45452 7.70967 7.85135 7.85654 8.40933 8.94183 9.24904 9.85880 10.33733 11.35169 Molecular weight = 308.16amu Principal moments of inertia in cm(-1) A = 0.018099 B = 0.003677 C = 0.003416 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1546.633035 B = 7613.101286 C = 8195.565553 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.103 3.897 3 N -0.620 5.620 4 C 0.481 3.519 5 O -0.519 6.519 6 C 0.137 3.863 7 N -0.576 5.576 8 C 0.165 3.835 9 C -0.247 4.247 10 H 0.066 0.934 11 C 0.003 3.997 12 N -0.908 5.908 13 Si 0.907 3.093 14 H -0.278 1.278 15 H -0.289 1.289 16 H -0.290 1.290 17 C 0.175 3.825 18 H 0.103 0.897 19 C -0.154 4.154 20 C -0.094 4.094 21 C -0.078 4.078 22 C -0.152 4.152 23 C 0.090 3.910 24 F -0.144 7.144 25 C -0.154 4.154 26 C -0.088 4.088 27 H 0.062 0.938 28 H 0.059 0.941 29 H 0.066 0.934 30 H 0.078 0.922 31 H 0.077 0.923 32 H 0.065 0.935 33 H 0.079 0.921 34 H 0.021 0.979 35 H 0.060 0.940 36 H -0.008 1.008 37 H 0.252 0.748 38 H 0.061 0.939 39 H 0.065 0.935 40 H 0.067 0.933 41 H 0.133 0.867 42 H 0.133 0.867 43 H 0.133 0.867 44 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.829 -9.392 19.003 21.385 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C -0.020 4.020 3 N -0.357 5.357 4 C 0.268 3.732 5 O -0.392 6.392 6 C 0.005 3.995 7 N -0.295 5.295 8 C 0.021 3.979 9 C -0.376 4.376 10 H 0.083 0.917 11 C -0.195 4.195 12 N -0.554 5.554 13 Si 0.737 3.263 14 H -0.203 1.203 15 H -0.216 1.216 16 H -0.217 1.217 17 C 0.070 3.930 18 H 0.121 0.879 19 C -0.211 4.211 20 C -0.095 4.095 21 C -0.097 4.097 22 C -0.171 4.171 23 C 0.070 3.930 24 F -0.123 7.123 25 C -0.173 4.173 26 C -0.106 4.106 27 H 0.081 0.919 28 H 0.078 0.922 29 H 0.085 0.915 30 H 0.097 0.903 31 H 0.095 0.905 32 H 0.083 0.917 33 H 0.097 0.903 34 H 0.039 0.961 35 H 0.079 0.921 36 H 0.010 0.990 37 H 0.062 0.938 38 H 0.080 0.920 39 H 0.084 0.916 40 H 0.086 0.914 41 H 0.151 0.849 42 H 0.151 0.849 43 H 0.151 0.849 44 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 3.114 -8.685 18.729 20.878 hybrid contribution -0.230 0.652 -0.129 0.703 sum 2.885 -8.032 18.601 20.465 Atomic orbital electron populations 1.22371 0.95958 1.02057 1.03213 1.21627 0.94557 0.83317 1.02542 1.48533 1.67031 1.13969 1.06188 1.23531 0.76491 0.87321 0.85872 1.90621 1.44325 1.18036 1.86220 1.20749 1.00500 0.92395 0.85901 1.43596 1.11570 1.41044 1.33335 1.20805 0.83139 1.01672 0.92290 1.19182 1.02739 1.21139 0.94590 0.91658 1.24972 0.98945 1.00217 0.95360 1.70082 1.39792 1.42890 1.02596 0.86140 0.80372 0.81848 0.77912 1.20327 1.21562 1.21703 1.19785 0.89143 0.99437 0.84586 0.87948 1.22169 0.99158 1.01991 0.97827 1.20416 0.96918 0.93541 0.98668 1.20944 0.91875 1.00011 0.96863 1.21121 0.98245 0.94101 1.03651 1.17733 0.80525 0.93247 1.01451 1.91482 1.40164 1.90960 1.89663 1.21123 0.93763 0.99785 1.02594 1.21159 0.95845 0.95851 0.97765 0.91861 0.92247 0.91504 0.90340 0.90483 0.91691 0.90292 0.96082 0.92135 0.98984 0.93762 0.92025 0.91636 0.91446 0.84913 0.84861 0.84909 0.84518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -1.73 9.99 37.16 0.37 -1.36 16 2 C 0.10 1.06 4.26 -4.04 -0.02 1.04 16 3 N -0.62 -8.75 2.26 -167.43 -0.38 -9.13 16 4 C 0.48 9.40 7.69 -10.99 -0.08 9.32 16 5 O -0.52 -12.56 15.86 5.55 0.09 -12.47 16 6 C 0.14 2.79 4.77 -5.19 -0.02 2.76 16 7 N -0.58 -15.06 2.41 -182.51 -0.44 -15.50 16 8 C 0.17 4.33 8.99 59.84 0.54 4.87 16 9 C -0.25 -7.03 9.66 -15.06 -0.15 -7.17 16 10 H 0.07 1.85 7.85 -52.49 -0.41 1.44 16 11 C 0.00 0.08 5.09 -17.43 -0.09 -0.01 16 12 N -0.91 -26.92 10.65 55.49 0.59 -26.33 16 13 Si 0.91 22.49 29.57 -169.99 -5.03 17.47 16 14 H -0.28 -6.77 7.11 56.52 0.40 -6.37 16 15 H -0.29 -7.23 7.11 56.52 0.40 -6.83 16 16 H -0.29 -7.11 7.11 56.52 0.40 -6.71 16 17 C 0.17 2.21 2.81 -69.09 -0.19 2.02 16 18 H 0.10 1.54 6.93 -51.92 -0.36 1.18 16 19 C -0.15 -1.44 7.92 37.16 0.29 -1.15 16 20 C -0.09 -1.13 4.95 -104.62 -0.52 -1.65 16 21 C -0.08 -0.92 9.66 -39.60 -0.38 -1.31 16 22 C -0.15 -1.73 10.03 -39.51 -0.40 -2.12 16 23 C 0.09 1.06 7.30 -39.42 -0.29 0.77 16 24 F -0.14 -1.77 17.27 2.25 0.04 -1.73 16 25 C -0.15 -1.66 10.03 -39.52 -0.40 -2.05 16 26 C -0.09 -0.96 9.08 -39.60 -0.36 -1.32 16 27 H 0.06 0.49 8.14 -51.93 -0.42 0.07 16 28 H 0.06 0.56 6.24 -51.93 -0.32 0.23 16 29 H 0.07 0.80 6.41 -51.93 -0.33 0.47 16 30 H 0.08 0.80 6.73 -51.93 -0.35 0.45 16 31 H 0.08 0.61 4.31 -51.93 -0.22 0.39 16 32 H 0.07 1.18 7.35 -51.93 -0.38 0.79 16 33 H 0.08 1.50 6.27 -51.93 -0.33 1.17 16 34 H 0.02 0.56 7.81 -51.93 -0.41 0.15 16 35 H 0.06 1.74 6.71 -51.93 -0.35 1.39 16 36 H -0.01 -0.20 8.10 -51.93 -0.42 -0.62 16 37 H 0.25 7.21 8.31 -40.82 -0.34 6.87 16 38 H 0.06 0.49 6.65 -51.93 -0.35 0.15 16 39 H 0.06 0.54 8.14 -51.93 -0.42 0.12 16 40 H 0.07 0.66 7.17 -51.93 -0.37 0.28 16 41 H 0.13 1.42 8.00 -52.48 -0.42 1.00 16 42 H 0.13 1.26 8.06 -52.48 -0.42 0.84 16 43 H 0.13 1.16 8.06 -52.48 -0.42 0.73 16 44 H 0.14 1.23 4.55 -52.48 -0.24 0.99 16 LS Contribution 353.35 15.07 5.32 5.32 Total: -1.00 -33.95 353.35 -7.58 -41.53 By element: Atomic # 1 Polarization: 4.28 SS G_CDS: -6.09 Total: -1.80 kcal Atomic # 6 Polarization: 4.33 SS G_CDS: -1.69 Total: 2.64 kcal Atomic # 7 Polarization: -50.73 SS G_CDS: -0.23 Total: -50.96 kcal Atomic # 8 Polarization: -12.56 SS G_CDS: 0.09 Total: -12.47 kcal Atomic # 9 Polarization: -1.77 SS G_CDS: 0.04 Total: -1.73 kcal Atomic # 14 Polarization: 22.49 SS G_CDS: -5.03 Total: 17.47 kcal Total LS contribution 5.32 Total: 5.32 kcal Total: -33.95 -7.58 -41.53 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000075828551.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.921 kcal (2) G-P(sol) polarization free energy of solvation -33.953 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.032 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.579 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.531 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.611 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds