Wall clock time and date at job start Tue Mar 31 2020 10:03:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 N 1.28431 * 125.18817 * 2 1 4 4 C 1.30840 * 110.98643 * 180.29322 * 3 2 1 5 5 C 1.39806 * 107.87259 * 359.71546 * 4 3 2 6 6 Cl 1.73602 * 127.33449 * 179.97438 * 5 4 3 7 7 C 1.36748 * 125.18650 * 179.80356 * 2 1 3 8 8 C 1.46998 * 126.90337 * 359.97438 * 7 2 1 9 9 O 1.21665 * 120.00257 * 99.63449 * 8 7 2 10 10 N 1.34781 * 120.00074 * 279.62745 * 8 7 2 11 11 C 1.40079 * 119.99983 * 174.84086 * 10 8 7 12 12 C 1.40427 * 125.97426 * 359.97438 * 11 10 8 13 13 C 1.35238 * 107.86499 * 179.72039 * 12 11 10 14 14 N 1.34972 * 107.86407 * 0.42111 * 13 12 11 15 15 C 1.46504 * 125.97329 * 179.83571 * 14 13 12 16 16 C 1.50695 * 109.46635 * 124.71802 * 15 14 13 17 17 H 1.07994 * 120.00604 * 0.02562 * 16 15 14 18 18 C 1.37886 * 119.99605 * 180.02562 * 16 15 14 19 19 N 1.31514 * 119.99984 * 359.72599 * 18 16 15 20 20 Si 1.86799 * 119.99891 * 180.02562 * 18 16 15 21 21 H 1.48499 * 109.47446 * 179.72165 * 20 18 16 22 22 H 1.48504 * 109.47309 * 299.72795 * 20 18 16 23 23 H 1.48510 * 109.47041 * 59.72461 * 20 18 16 24 24 N 1.31229 * 125.97594 * 179.97438 * 11 10 8 25 25 H 1.08997 * 109.47390 * 275.18448 * 1 2 3 26 26 H 1.09003 * 109.47117 * 35.18565 * 1 2 3 27 27 H 1.09000 * 109.47000 * 155.18158 * 1 2 3 28 28 H 1.07997 * 126.06341 * 179.72857 * 4 3 2 29 29 H 0.96993 * 119.99829 * 354.84248 * 10 8 7 30 30 H 1.07999 * 126.06825 * 359.97438 * 12 11 10 31 31 H 1.08001 * 126.06673 * 180.29823 * 13 12 11 32 32 H 1.09003 * 109.46656 * 4.72205 * 15 14 13 33 33 H 1.08992 * 109.47047 * 244.72338 * 15 14 13 34 34 H 0.97000 * 120.00073 * 0.27768 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2051 1.0496 0.0000 4 6 3.4735 0.7286 -0.0063 5 6 3.5630 -0.6666 -0.0041 6 17 5.0079 -1.6288 -0.0108 7 6 2.2530 -1.1176 0.0038 8 6 1.8009 -2.5163 0.0092 9 8 1.7813 -3.1533 -1.0273 10 7 1.4084 -3.0933 1.1622 11 6 0.8762 -4.3890 1.1513 12 6 0.6952 -5.1970 0.0171 13 6 0.1637 -6.3717 0.4251 14 7 0.0034 -6.3109 1.7639 15 6 -0.5462 -7.3701 2.6138 16 6 0.4396 -7.7011 3.7045 17 1 1.3810 -7.1748 3.7594 18 6 0.1395 -8.6758 4.6324 19 7 -1.0093 -9.3129 4.5687 20 14 1.3611 -9.0856 5.9848 21 1 0.8016 -10.1551 6.8499 22 1 2.6328 -9.5545 5.3779 23 1 1.6202 -7.8729 6.8020 24 7 0.4595 -5.0601 2.1993 25 1 -0.3634 0.0929 1.0234 26 1 -0.3633 0.8399 -0.5922 27 1 -0.3633 -0.9328 -0.4314 28 1 4.3040 1.4190 -0.0118 29 1 1.4944 -2.6114 1.9995 30 1 0.9412 -4.9295 -0.9999 31 1 -0.0897 -7.2090 -0.2083 32 1 -0.7334 -8.2589 2.0112 33 1 -1.4808 -7.0300 3.0596 34 1 -1.6438 -9.0999 3.8666 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001645975607.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:03:22 Heat of formation + Delta-G solvation = 127.519362 kcal Electronic energy + Delta-G solvation = -22099.271682 eV Core-core repulsion = 18483.447088 eV Total energy + Delta-G solvation = -3615.824593 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 309.073 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -42.98568 -40.86978 -39.30234 -36.85042 -35.08250 -33.85580 -33.69714 -31.61433 -30.59728 -29.53054 -27.58505 -26.49247 -24.32850 -22.90187 -22.16220 -21.34066 -20.44848 -19.80894 -18.27303 -17.26851 -16.99847 -16.66777 -16.21774 -15.61277 -15.40485 -14.96089 -14.56255 -14.09767 -13.84898 -13.79439 -13.53049 -13.32237 -13.16651 -12.57768 -12.33941 -12.16592 -12.03924 -11.87368 -11.24248 -10.88599 -10.83238 -10.66372 -10.40126 -10.19204 -9.98762 -9.66559 -9.10692 -9.08288 -8.63205 -8.36899 -7.69202 -6.63466 -4.38006 1.03846 1.40447 1.86592 2.09716 2.32016 2.53943 2.73621 3.35475 3.36739 3.45697 3.52771 3.57757 4.09745 4.22039 4.37149 4.60236 4.65833 4.92153 4.96073 4.97795 5.10133 5.30990 5.55221 5.76062 5.95969 6.15053 6.24211 6.32320 6.47244 6.65582 7.09071 7.26761 7.48893 7.59232 7.71399 7.83403 8.27599 8.39149 8.55125 9.30140 10.74300 Molecular weight = 309.07amu Principal moments of inertia in cm(-1) A = 0.019611 B = 0.003166 C = 0.002989 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1427.427263 B = 8842.387166 C = 9364.887797 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.083 3.917 2 N -0.263 5.263 3 N -0.267 5.267 4 C 0.024 3.976 5 C -0.109 4.109 6 Cl -0.013 7.013 7 C -0.010 4.010 8 C 0.598 3.402 9 O -0.486 6.486 10 N -0.615 5.615 11 C 0.255 3.745 12 C -0.284 4.284 13 C 0.054 3.946 14 N -0.313 5.313 15 C 0.249 3.751 16 C -0.610 4.610 17 H 0.064 0.936 18 C 0.024 3.976 19 N -0.904 5.904 20 Si 1.076 2.924 21 H -0.280 1.280 22 H -0.285 1.285 23 H -0.285 1.285 24 N -0.294 5.294 25 H 0.094 0.906 26 H 0.105 0.895 27 H 0.098 0.902 28 H 0.197 0.803 29 H 0.415 0.585 30 H 0.161 0.839 31 H 0.170 0.830 32 H 0.048 0.952 33 H 0.036 0.964 34 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.743 18.651 -9.851 21.620 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.051 5.051 3 N -0.098 5.098 4 C -0.153 4.153 5 C -0.147 4.147 6 Cl 0.015 6.985 7 C -0.141 4.141 8 C 0.379 3.621 9 O -0.356 6.356 10 N -0.262 5.262 11 C 0.002 3.998 12 C -0.316 4.316 13 C -0.095 4.095 14 N -0.095 5.095 15 C 0.131 3.869 16 C -0.648 4.648 17 H 0.082 0.918 18 C -0.181 4.181 19 N -0.539 5.539 20 Si 0.903 3.097 21 H -0.205 1.205 22 H -0.212 1.212 23 H -0.211 1.211 24 N -0.125 5.125 25 H 0.113 0.887 26 H 0.123 0.877 27 H 0.117 0.883 28 H 0.214 0.786 29 H 0.251 0.749 30 H 0.179 0.821 31 H 0.188 0.812 32 H 0.065 0.935 33 H 0.053 0.947 34 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 3.933 17.961 -7.963 20.036 hybrid contribution 0.594 0.449 -1.759 1.910 sum 4.527 18.409 -9.721 21.305 Atomic orbital electron populations 1.22365 0.71820 1.06065 1.05402 1.45536 1.07808 1.01320 1.50480 1.73259 1.03334 1.13113 1.20118 1.23545 0.93926 0.92561 1.05314 1.21280 0.87380 0.92666 1.13389 1.98382 1.32801 1.70156 1.97151 1.21004 0.91005 0.89048 1.13008 1.16646 0.77857 0.83964 0.83617 1.90832 1.50282 1.62547 1.31897 1.42278 1.60392 1.13386 1.10174 1.18991 1.01025 0.86190 0.93602 1.21507 1.15700 0.94400 0.99945 1.22582 1.01365 0.99617 0.85980 1.48854 1.44620 1.10897 1.05129 1.19803 0.95180 0.81775 0.90165 1.22100 1.04850 1.24203 1.13675 0.91776 1.25929 0.99440 0.92766 0.99940 1.70859 1.07551 1.41199 1.34275 0.83426 0.74431 0.76566 0.75288 1.20482 1.21173 1.21096 1.77387 1.21613 0.93852 1.19640 0.88744 0.87676 0.88323 0.78570 0.74936 0.82143 0.81247 0.93479 0.94654 0.92273 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.56 11.22 59.85 0.67 1.23 16 2 N -0.26 -2.70 3.75 -63.86 -0.24 -2.94 16 3 N -0.27 -2.81 11.89 30.61 0.36 -2.44 16 4 C 0.02 0.24 12.04 -17.39 -0.21 0.03 16 5 C -0.11 -1.26 6.89 -38.88 -0.27 -1.53 16 6 Cl -0.01 -0.16 29.24 -51.86 -1.52 -1.67 16 7 C -0.01 -0.12 6.71 -82.01 -0.55 -0.67 16 8 C 0.60 8.62 6.88 -12.71 -0.09 8.54 16 9 O -0.49 -8.31 14.26 5.22 0.07 -8.24 16 10 N -0.61 -9.19 5.44 -12.23 -0.07 -9.26 16 11 C 0.25 4.84 8.10 -154.45 -1.25 3.59 16 12 C -0.28 -5.30 9.61 -39.83 -0.38 -5.69 16 13 C 0.05 1.03 11.43 -17.24 -0.20 0.83 16 14 N -0.31 -7.01 3.67 -62.56 -0.23 -7.24 16 15 C 0.25 6.09 5.57 -5.19 -0.03 6.06 16 16 C -0.61 -16.81 9.24 -34.44 -0.32 -17.13 16 17 H 0.06 1.85 7.81 -52.49 -0.41 1.44 16 18 C 0.02 0.66 5.46 -17.82 -0.10 0.57 16 19 N -0.90 -25.86 13.65 55.43 0.76 -25.10 16 20 Si 1.08 24.57 29.90 -169.99 -5.08 19.49 16 21 H -0.28 -6.32 7.11 56.52 0.40 -5.92 16 22 H -0.29 -6.28 7.11 56.52 0.40 -5.87 16 23 H -0.28 -6.30 7.11 56.52 0.40 -5.90 16 24 N -0.29 -6.50 12.42 31.43 0.39 -6.11 16 25 H 0.09 0.49 8.14 -51.93 -0.42 0.07 16 26 H 0.10 0.50 8.14 -51.93 -0.42 0.08 16 27 H 0.10 0.68 7.66 -51.93 -0.40 0.29 16 28 H 0.20 1.24 8.06 -52.49 -0.42 0.82 16 29 H 0.41 5.28 8.81 -40.82 -0.36 4.92 16 30 H 0.16 2.88 5.92 -52.49 -0.31 2.57 16 31 H 0.17 2.58 8.06 -52.49 -0.42 2.16 16 32 H 0.05 1.11 7.94 -51.93 -0.41 0.70 16 33 H 0.04 0.90 8.00 -51.93 -0.42 0.48 16 34 H 0.27 7.44 7.22 -40.82 -0.29 7.15 16 LS Contribution 324.46 15.07 4.89 4.89 Total: -1.00 -33.37 324.46 -6.47 -39.83 By element: Atomic # 1 Polarization: 6.06 SS G_CDS: -3.09 Total: 2.97 kcal Atomic # 6 Polarization: -1.46 SS G_CDS: -2.72 Total: -4.18 kcal Atomic # 7 Polarization: -54.07 SS G_CDS: 0.98 Total: -53.09 kcal Atomic # 8 Polarization: -8.31 SS G_CDS: 0.07 Total: -8.24 kcal Atomic # 14 Polarization: 24.57 SS G_CDS: -5.08 Total: 19.49 kcal Atomic # 17 Polarization: -0.16 SS G_CDS: -1.52 Total: -1.67 kcal Total LS contribution 4.89 Total: 4.89 kcal Total: -33.37 -6.47 -39.83 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001645975607.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 167.353 kcal (2) G-P(sol) polarization free energy of solvation -33.367 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 133.986 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.467 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.834 kcal (6) G-S(sol) free energy of system = (1) + (5) 127.519 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds