Wall clock time and date at job start Tue Mar 31 2020 10:24:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46492 * 1 3 3 C 1.34597 * 126.49261 * 2 1 4 4 Cl 1.73606 * 125.43535 * 0.02562 * 3 2 1 5 5 N 1.31028 * 109.13317 * 179.97438 * 3 2 1 6 6 C 1.33303 * 109.70052 * 359.73004 * 5 3 2 7 7 C 1.36678 * 107.83035 * 0.43614 * 6 5 3 8 8 C 1.46659 * 126.83890 * 179.83547 * 7 6 5 9 9 O 1.21699 * 119.99805 * 185.04130 * 8 7 6 10 10 N 1.34776 * 120.00486 * 5.04860 * 8 7 6 11 11 C 1.46493 * 120.00444 * 175.62719 * 10 8 7 12 12 H 1.09000 * 115.51418 * 9.58348 * 11 10 8 13 13 C 1.57113 * 116.92523 * 222.98969 * 11 10 8 14 14 H 1.08996 * 119.80328 * 3.77244 * 13 11 10 15 15 C 1.54796 * 118.02153 * 161.34939 * 13 11 10 16 16 N 1.48145 * 104.41746 * 86.47443 * 15 13 11 17 17 C 1.36937 * 127.83712 * 140.36833 * 16 15 13 18 18 H 1.08007 * 120.00048 * 339.57568 * 17 16 15 19 19 C 1.38804 * 120.00111 * 159.57724 * 17 16 15 20 20 N 1.31628 * 120.00000 * 334.02287 * 19 17 16 21 21 Si 1.86807 * 120.00230 * 154.02484 * 19 17 16 22 22 H 1.48505 * 109.46939 * 90.00113 * 21 19 17 23 23 H 1.48499 * 109.46660 * 330.00074 * 21 19 17 24 24 H 1.48497 * 109.47308 * 209.99863 * 21 19 17 25 25 C 1.48144 * 104.32723 * 320.10923 * 16 15 13 26 26 C 1.53001 * 117.44434 * 154.99896 * 11 10 8 27 27 H 1.09002 * 119.53779 * 354.24292 * 26 11 10 28 28 H 1.09002 * 109.47074 * 269.58988 * 1 2 3 29 29 H 1.08996 * 109.47178 * 29.58664 * 1 2 3 30 30 H 1.09000 * 109.47074 * 149.58977 * 1 2 3 31 31 H 1.07999 * 126.08152 * 180.30493 * 6 5 3 32 32 H 0.97006 * 119.99670 * 355.63477 * 10 8 7 33 33 H 1.09007 * 110.54185 * 327.73797 * 15 13 11 34 34 H 1.09003 * 110.46485 * 205.17731 * 15 13 11 35 35 H 0.96994 * 119.99786 * 354.66796 * 20 19 17 36 36 H 1.08996 * 110.40841 * 158.62832 * 25 16 15 37 37 H 1.09000 * 110.40681 * 280.94632 * 25 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2654 1.0821 0.0000 4 17 1.7269 2.7325 0.0006 5 7 3.5160 0.6911 0.0006 6 6 3.5705 -0.6408 0.0068 7 6 2.2875 -1.1121 0.0005 8 6 1.8669 -2.5171 0.0006 9 8 0.6872 -2.7991 -0.0980 10 7 2.7868 -3.4960 0.1102 11 6 2.3607 -4.8943 0.2068 12 1 1.3023 -5.0764 0.0205 13 6 3.1007 -5.7922 1.2625 14 1 3.8474 -5.3497 1.9217 15 6 2.4152 -7.1071 1.7069 16 7 2.8436 -8.1052 0.6995 17 6 3.1930 -9.4127 0.9082 18 1 3.4942 -9.7407 1.8922 19 6 3.1600 -10.3165 -0.1447 20 7 2.3535 -10.1100 -1.1643 21 14 4.2599 -11.8261 -0.1147 22 1 3.5434 -12.9476 0.5442 23 1 5.5009 -11.5193 0.6410 24 1 4.6098 -12.2113 -1.5055 25 6 2.8023 -7.3698 -0.5859 26 6 3.3518 -5.9667 -0.2498 27 1 4.2912 -5.6673 -0.7146 28 1 -0.3633 -0.0074 1.0277 29 1 -0.3633 0.8936 -0.5074 30 1 -0.3633 -0.8863 -0.5202 31 1 4.4685 -1.2406 0.0134 32 1 3.7312 -3.2746 0.1252 33 1 1.3308 -6.9962 1.6947 34 1 2.7572 -7.3984 2.7000 35 1 1.7273 -9.3695 -1.1451 36 1 3.4367 -7.8595 -1.3246 37 1 1.7778 -7.3011 -0.9516 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000961118921.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:24:01 Heat of formation + Delta-G solvation = 87.958082 kcal Electronic energy + Delta-G solvation = -22461.618605 eV Core-core repulsion = 18882.192938 eV Total energy + Delta-G solvation = -3579.425667 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 310.094 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -42.69810 -39.76786 -38.35652 -37.47968 -35.09142 -34.39918 -32.98497 -30.75261 -29.61677 -27.60135 -27.40759 -25.57052 -23.86566 -22.24848 -21.43000 -20.71360 -20.15176 -19.45686 -18.34986 -17.49884 -16.82381 -16.66749 -16.56688 -15.22738 -14.93019 -14.73683 -14.24277 -14.02147 -13.80350 -13.62709 -13.61946 -13.23297 -13.17586 -12.48673 -12.32183 -12.08045 -11.94385 -11.61383 -10.91086 -10.85424 -10.71926 -10.61987 -10.35369 -10.31950 -10.18896 -10.08282 -9.73368 -9.35875 -9.06554 -8.63487 -8.44041 -7.05706 -6.19313 -3.22783 0.72549 0.76211 2.16506 2.21397 2.90449 2.95920 3.47301 3.51673 3.66890 4.01119 4.12543 4.26493 4.47761 4.53049 4.76755 4.81376 4.86107 5.11855 5.14895 5.23227 5.35430 5.47386 5.63794 5.72450 5.83498 5.87732 5.94716 6.19227 6.30441 6.51306 6.55105 6.68819 6.89418 6.92342 7.14412 7.28860 7.68666 7.90828 8.39705 8.91680 9.72898 10.34919 11.17232 Molecular weight = 310.09amu Principal moments of inertia in cm(-1) A = 0.046806 B = 0.002356 C = 0.002316 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 598.069425 B =11883.757283 C =12087.318335 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.059 3.941 2 N -0.411 5.411 3 C 0.259 3.741 4 Cl 0.043 6.957 5 N -0.467 5.467 6 C 0.049 3.951 7 C -0.064 4.064 8 C 0.598 3.402 9 O -0.538 6.538 10 N -0.679 5.679 11 C 0.095 3.905 12 H 0.138 0.862 13 C -0.177 4.177 14 H 0.109 0.891 15 C 0.154 3.846 16 N -0.596 5.596 17 C -0.333 4.333 18 H 0.066 0.934 19 C -0.025 4.025 20 N -0.916 5.916 21 Si 1.070 2.930 22 H -0.293 1.293 23 H -0.292 1.292 24 H -0.285 1.285 25 C 0.165 3.835 26 C -0.170 4.170 27 H 0.107 0.893 28 H 0.088 0.912 29 H 0.090 0.910 30 H 0.114 0.886 31 H 0.190 0.810 32 H 0.403 0.597 33 H 0.027 0.973 34 H 0.055 0.945 35 H 0.269 0.731 36 H 0.070 0.930 37 H 0.029 0.971 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.745 23.754 2.220 23.869 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.095 5.095 3 C -0.028 4.028 4 Cl 0.070 6.930 5 N -0.189 5.189 6 C -0.106 4.106 7 C -0.181 4.181 8 C 0.384 3.616 9 O -0.416 6.416 10 N -0.327 5.327 11 C -0.011 4.011 12 H 0.155 0.845 13 C -0.199 4.199 14 H 0.127 0.873 15 C 0.028 3.972 16 N -0.320 5.320 17 C -0.460 4.460 18 H 0.084 0.916 19 C -0.227 4.227 20 N -0.556 5.556 21 Si 0.899 3.101 22 H -0.221 1.221 23 H -0.218 1.218 24 H -0.211 1.211 25 C 0.038 3.962 26 C -0.191 4.191 27 H 0.125 0.875 28 H 0.106 0.894 29 H 0.109 0.891 30 H 0.133 0.867 31 H 0.207 0.793 32 H 0.238 0.762 33 H 0.045 0.955 34 H 0.074 0.926 35 H 0.080 0.920 36 H 0.088 0.912 37 H 0.047 0.953 Dipole moment (debyes) X Y Z Total from point charges -0.666 22.719 1.318 22.767 hybrid contribution -0.696 1.331 0.958 1.782 sum -1.363 24.050 2.276 24.196 Atomic orbital electron populations 1.22477 0.74325 1.06328 1.05134 1.45044 1.08690 1.04365 1.51367 1.23235 0.86647 0.84555 1.08346 1.98436 1.88668 1.08793 1.97071 1.70075 1.16110 1.12612 1.20054 1.22708 0.95638 0.90087 1.02163 1.20789 0.91039 0.88542 1.17731 1.16540 0.85712 0.82590 0.76738 1.90816 1.16874 1.83646 1.50244 1.44936 1.09294 1.05494 1.72999 1.22575 0.98412 0.76341 1.03739 0.84490 1.25169 1.03357 0.98664 0.92678 0.87277 1.21200 0.95531 0.86513 0.93971 1.45283 1.77679 1.07515 1.01527 1.19732 1.43996 0.83409 0.98900 0.91617 1.25874 1.00316 1.01549 0.94946 1.70750 1.18986 1.31352 1.34500 0.83474 0.75705 0.75001 0.75911 1.22074 1.21836 1.21075 1.21134 0.97834 0.86708 0.90510 1.24434 0.99976 0.96571 0.98097 0.87540 0.89383 0.89091 0.86709 0.79264 0.76213 0.95526 0.92637 0.91999 0.91200 0.95340 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 39. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.46 10.56 59.84 0.63 1.10 16 2 N -0.41 -4.30 3.18 -118.36 -0.38 -4.67 16 3 C 0.26 2.73 8.48 -90.34 -0.77 1.96 16 4 Cl 0.04 0.34 28.73 -51.86 -1.49 -1.15 16 5 N -0.47 -5.44 11.21 -11.48 -0.13 -5.57 16 6 C 0.05 0.49 11.37 -17.48 -0.20 0.29 16 7 C -0.06 -0.72 6.91 -82.10 -0.57 -1.29 16 8 C 0.60 7.78 7.78 -12.86 -0.10 7.68 16 9 O -0.54 -8.55 14.44 5.19 0.07 -8.47 16 10 N -0.68 -8.12 5.56 -52.96 -0.29 -8.42 16 11 C 0.09 1.44 6.20 -65.70 -0.41 1.03 16 12 H 0.14 2.36 7.39 -51.93 -0.38 1.97 16 13 C -0.18 -2.92 7.25 -86.77 -0.63 -3.55 16 14 H 0.11 1.58 8.14 -51.93 -0.42 1.16 16 15 C 0.15 3.16 7.08 -2.19 -0.02 3.14 16 16 N -0.60 -14.83 3.23 -168.60 -0.54 -15.38 16 17 C -0.33 -9.26 10.18 -15.06 -0.15 -9.41 16 18 H 0.07 1.81 7.95 -52.48 -0.42 1.40 16 19 C -0.02 -0.70 5.09 -17.43 -0.09 -0.79 16 20 N -0.92 -27.37 12.80 55.49 0.71 -26.66 16 21 Si 1.07 24.96 29.99 -169.99 -5.10 19.86 16 22 H -0.29 -6.65 7.11 56.52 0.40 -6.25 16 23 H -0.29 -6.49 7.11 56.52 0.40 -6.09 16 24 H -0.29 -6.69 7.11 56.52 0.40 -6.29 16 25 C 0.16 3.70 5.01 -2.41 -0.01 3.69 16 26 C -0.17 -2.91 6.91 -89.22 -0.62 -3.52 16 27 H 0.11 1.63 8.14 -51.93 -0.42 1.21 16 28 H 0.09 0.60 8.14 -51.93 -0.42 0.18 16 29 H 0.09 0.50 7.77 -51.93 -0.40 0.10 16 30 H 0.11 1.08 6.42 -51.93 -0.33 0.74 16 31 H 0.19 1.27 7.46 -52.49 -0.39 0.87 16 32 H 0.40 3.61 7.77 -40.82 -0.32 3.30 16 33 H 0.03 0.56 8.14 -51.93 -0.42 0.13 16 34 H 0.06 1.11 8.14 -51.93 -0.42 0.68 16 35 H 0.27 8.07 6.50 -40.82 -0.27 7.80 16 36 H 0.07 1.73 7.44 -51.93 -0.39 1.35 16 37 H 0.03 0.67 7.69 -51.93 -0.40 0.27 16 LS Contribution 330.37 15.07 4.98 4.98 Total: -1.00 -33.32 330.37 -9.30 -42.62 By element: Atomic # 1 Polarization: 6.74 SS G_CDS: -4.21 Total: 2.53 kcal Atomic # 6 Polarization: 3.25 SS G_CDS: -2.92 Total: 0.33 kcal Atomic # 7 Polarization: -60.06 SS G_CDS: -0.63 Total: -60.70 kcal Atomic # 8 Polarization: -8.55 SS G_CDS: 0.07 Total: -8.47 kcal Atomic # 14 Polarization: 24.96 SS G_CDS: -5.10 Total: 19.86 kcal Atomic # 17 Polarization: 0.34 SS G_CDS: -1.49 Total: -1.15 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -33.32 -9.30 -42.62 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000961118921.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 130.575 kcal (2) G-P(sol) polarization free energy of solvation -33.320 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 97.255 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.297 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.617 kcal (6) G-S(sol) free energy of system = (1) + (5) 87.958 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds