Wall clock time and date at job start Tue Mar 31 2020 09:49:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 N 1.31932 * 119.01432 * 2 1 4 4 C 1.32132 * 121.05568 * 179.97438 * 3 2 1 5 5 C 1.38993 * 119.12492 * 359.72360 * 4 3 2 6 6 Cl 1.73600 * 120.88776 * 180.29587 * 5 4 3 7 7 C 1.39637 * 118.22177 * 0.53817 * 5 4 3 8 8 C 1.48371 * 120.55668 * 179.73796 * 7 5 4 9 9 O 1.21483 * 120.00174 * 359.72152 * 8 7 5 10 10 N 1.34777 * 119.99492 * 179.71860 * 8 7 5 11 11 C 1.46499 * 119.99665 * 179.72345 * 10 8 7 12 12 H 1.09003 * 110.88938 * 329.15456 * 11 10 8 13 13 C 1.55161 * 111.00561 * 205.28118 * 11 10 8 14 14 C 1.54331 * 102.93879 * 277.42706 * 13 11 10 15 15 N 1.47024 * 107.27011 * 337.80597 * 14 13 11 16 16 C 1.36935 * 125.64661 * 178.98409 * 15 14 13 17 17 H 1.07998 * 120.00339 * 179.97438 * 16 15 14 18 18 C 1.38813 * 119.99848 * 359.97438 * 16 15 14 19 19 N 1.31617 * 120.00493 * 359.97438 * 18 16 15 20 20 Si 1.86801 * 119.99921 * 179.97438 * 18 16 15 21 21 H 1.48505 * 109.47106 * 359.97438 * 20 18 16 22 22 H 1.48497 * 109.47470 * 119.99828 * 20 18 16 23 23 H 1.48505 * 109.47183 * 240.00408 * 20 18 16 24 24 C 1.47418 * 108.70330 * 358.94023 * 15 14 13 25 25 N 1.31516 * 119.01884 * 179.97438 * 2 1 3 26 26 H 1.08998 * 109.47425 * 270.02100 * 1 2 3 27 27 H 1.09000 * 109.47345 * 30.02455 * 1 2 3 28 28 H 1.09001 * 109.46862 * 150.02163 * 1 2 3 29 29 H 1.07996 * 120.43831 * 179.97438 * 4 3 2 30 30 H 0.97001 * 120.00485 * 0.02562 * 10 8 7 31 31 H 1.08996 * 110.72196 * 35.78728 * 13 11 10 32 32 H 1.08990 * 110.72307 * 158.89011 * 13 11 10 33 33 H 1.09001 * 109.88027 * 97.22554 * 14 13 11 34 34 H 1.08999 * 109.88222 * 218.38774 * 14 13 11 35 35 H 0.96995 * 120.00120 * 179.97438 * 19 18 16 36 36 H 1.09000 * 110.37044 * 265.28953 * 24 15 14 37 37 H 1.09006 * 110.36755 * 142.96761 * 24 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1469 1.1537 0.0000 4 6 3.4674 1.2008 0.0005 5 6 4.1867 0.0115 0.0069 6 17 5.9227 0.0200 0.0155 7 6 3.4757 -1.1903 0.0010 8 6 4.1912 -2.4901 0.0015 9 8 5.4058 -2.5148 0.0020 10 7 3.4936 -3.6432 0.0015 11 6 4.2001 -4.9266 -0.0041 12 1 5.1515 -4.8443 -0.5296 13 6 3.3185 -6.0441 -0.6219 14 6 2.4264 -6.4745 0.5616 15 7 3.1202 -6.0813 1.7968 16 6 2.6510 -6.2678 3.0696 17 1 3.2391 -5.9425 3.9151 18 6 1.4195 -6.8749 3.2733 19 7 0.7024 -7.2709 2.2431 20 14 0.7797 -7.1300 5.0097 21 1 1.7680 -6.6014 5.9840 22 1 -0.5097 -6.4117 5.1728 23 1 0.5727 -8.5803 5.2530 24 6 4.4051 -5.4539 1.4380 25 7 2.1450 -1.1501 0.0005 26 1 -0.3634 0.0004 1.0276 27 1 -0.3634 0.8898 -0.5142 28 1 -0.3633 -0.8902 -0.5135 29 1 3.9810 2.1508 0.0001 30 1 2.5238 -3.6235 0.0008 31 1 2.7128 -5.6505 -1.4381 32 1 3.9342 -6.8749 -0.9663 33 1 1.4620 -5.9701 0.5015 34 1 2.2837 -7.5550 0.5445 35 1 -0.1580 -7.6955 2.3855 36 1 5.2072 -6.1916 1.4617 37 1 4.6269 -4.6292 2.1155 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001015799710.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 09:49:14 Heat of formation + Delta-G solvation = 45.044075 kcal Electronic energy + Delta-G solvation = -23286.916226 eV Core-core repulsion = 19705.629668 eV Total energy + Delta-G solvation = -3581.286558 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 310.094 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -41.52746 -39.44801 -37.32938 -36.79296 -34.37292 -33.65355 -33.22214 -31.73595 -29.22083 -28.61133 -27.49983 -25.84898 -24.44251 -23.36245 -21.22651 -20.10878 -19.86364 -18.59273 -17.86533 -16.83558 -16.30432 -15.96294 -15.83703 -15.24825 -14.66297 -14.54508 -14.06140 -13.79635 -13.70695 -13.22608 -13.17444 -12.63134 -12.45973 -12.00061 -11.95724 -11.84469 -11.61845 -11.53292 -11.16468 -10.96981 -10.91219 -10.75670 -10.41527 -10.19300 -10.11876 -9.96379 -9.69303 -9.39706 -9.29352 -8.79108 -8.54869 -6.83047 -5.72698 -3.05229 0.14228 0.47564 1.76967 2.70624 3.01154 3.38895 3.45186 3.47103 3.51209 3.55014 3.66633 4.23797 4.40605 4.49493 4.73314 5.09925 5.27079 5.35110 5.41713 5.47156 5.47225 5.55752 5.73866 5.81450 5.96539 6.15696 6.32839 6.37640 6.44931 6.47618 6.65258 6.94718 7.52609 7.54863 7.56717 7.77398 7.80219 8.23765 8.30223 9.21281 9.81091 10.46441 11.39313 Molecular weight = 310.09amu Principal moments of inertia in cm(-1) A = 0.014559 B = 0.004265 C = 0.003775 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1922.727851 B = 6563.025994 C = 7415.875888 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.319 3.681 3 N -0.495 5.495 4 C 0.165 3.835 5 C -0.112 4.112 6 Cl -0.001 7.001 7 C 0.154 3.846 8 C 0.560 3.440 9 O -0.514 6.514 10 N -0.675 5.675 11 C 0.125 3.875 12 H 0.094 0.906 13 C -0.153 4.153 14 C 0.175 3.825 15 N -0.604 5.604 16 C -0.224 4.224 17 H 0.077 0.923 18 C -0.008 4.008 19 N -0.922 5.922 20 Si 0.910 3.090 21 H -0.281 1.281 22 H -0.291 1.291 23 H -0.291 1.291 24 C 0.126 3.874 25 N -0.476 5.476 26 H 0.093 0.907 27 H 0.089 0.911 28 H 0.093 0.907 29 H 0.184 0.816 30 H 0.414 0.586 31 H 0.066 0.934 32 H 0.074 0.926 33 H 0.047 0.953 34 H 0.045 0.955 35 H 0.251 0.749 36 H 0.031 0.969 37 H 0.042 0.958 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.286 15.668 -8.474 18.113 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.053 3.947 3 N -0.210 5.210 4 C -0.004 4.004 5 C -0.145 4.145 6 Cl 0.028 6.972 7 C 0.005 3.995 8 C 0.342 3.658 9 O -0.389 6.389 10 N -0.325 5.325 11 C 0.020 3.980 12 H 0.112 0.888 13 C -0.192 4.192 14 C 0.050 3.950 15 N -0.330 5.330 16 C -0.353 4.353 17 H 0.095 0.905 18 C -0.204 4.204 19 N -0.570 5.570 20 Si 0.741 3.259 21 H -0.206 1.206 22 H -0.218 1.218 23 H -0.218 1.218 24 C -0.001 4.001 25 N -0.193 5.193 26 H 0.111 0.889 27 H 0.107 0.893 28 H 0.111 0.889 29 H 0.200 0.800 30 H 0.251 0.749 31 H 0.085 0.915 32 H 0.093 0.907 33 H 0.065 0.935 34 H 0.063 0.937 35 H 0.062 0.938 36 H 0.048 0.952 37 H 0.060 0.940 Dipole moment (debyes) X Y Z Total from point charges 3.137 15.464 -8.361 17.857 hybrid contribution 0.171 -0.116 1.024 1.044 sum 3.308 15.348 -7.337 17.330 Atomic orbital electron populations 1.20662 0.84526 1.04713 1.04658 1.23419 0.98719 0.82719 0.89857 1.68318 1.08939 1.30376 1.13411 1.23392 0.89251 0.97343 0.90413 1.22869 0.89848 0.95974 1.05761 1.98435 1.04221 1.98611 1.95970 1.21790 0.89545 0.94458 0.93734 1.17597 0.86725 0.82740 0.78726 1.90853 1.11990 1.86459 1.49584 1.45719 1.11405 1.04587 1.70796 1.22285 0.95706 0.81473 0.98538 0.88794 1.23235 0.99234 0.96972 0.99751 1.21188 0.92913 0.99116 0.81746 1.44478 1.16518 1.69546 1.02492 1.19091 1.00826 1.32899 0.82443 0.90536 1.24762 0.97191 1.01022 0.97400 1.69954 1.13451 1.45987 1.27633 0.86068 0.78575 0.77477 0.83794 1.20596 1.21798 1.21760 1.21936 0.90086 0.95411 0.92681 1.68397 1.07480 1.30891 1.12531 0.88899 0.89251 0.88855 0.79951 0.74949 0.91499 0.90728 0.93460 0.93658 0.93848 0.95173 0.93957 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.78 10.31 36.01 0.37 -0.41 16 2 C 0.32 3.93 7.64 -157.32 -1.20 2.73 16 3 N -0.50 -5.77 10.31 -10.70 -0.11 -5.88 16 4 C 0.16 1.74 11.14 -17.14 -0.19 1.55 16 5 C -0.11 -1.44 6.40 -38.78 -0.25 -1.69 16 6 Cl 0.00 -0.02 26.25 -51.86 -1.36 -1.38 16 7 C 0.15 2.31 6.79 -82.61 -0.56 1.75 16 8 C 0.56 9.48 7.82 -12.09 -0.09 9.38 16 9 O -0.51 -9.38 13.78 5.38 0.07 -9.31 16 10 N -0.68 -11.62 5.18 -52.50 -0.27 -11.89 16 11 C 0.13 2.22 3.43 -65.78 -0.23 1.99 16 12 H 0.09 1.57 7.54 -51.93 -0.39 1.18 16 13 C -0.15 -2.68 6.55 -24.89 -0.16 -2.85 16 14 C 0.18 4.05 5.36 -3.06 -0.02 4.03 16 15 N -0.60 -15.08 3.39 -170.07 -0.58 -15.66 16 16 C -0.22 -6.22 10.28 -15.06 -0.15 -6.37 16 17 H 0.08 2.09 7.83 -52.49 -0.41 1.68 16 18 C -0.01 -0.22 5.49 -17.43 -0.10 -0.31 16 19 N -0.92 -26.50 10.31 55.49 0.57 -25.93 16 20 Si 0.91 22.07 29.55 -169.99 -5.02 17.05 16 21 H -0.28 -6.67 7.11 56.52 0.40 -6.27 16 22 H -0.29 -7.08 7.11 56.52 0.40 -6.68 16 23 H -0.29 -7.09 7.11 56.52 0.40 -6.69 16 24 C 0.13 2.66 6.93 -2.53 -0.02 2.64 16 25 N -0.48 -6.85 9.59 -7.31 -0.07 -6.92 16 26 H 0.09 0.77 8.14 -51.93 -0.42 0.35 16 27 H 0.09 0.63 8.14 -51.93 -0.42 0.21 16 28 H 0.09 0.80 8.14 -51.93 -0.42 0.37 16 29 H 0.18 1.24 8.06 -52.49 -0.42 0.82 16 30 H 0.41 7.21 8.05 -40.82 -0.33 6.88 16 31 H 0.07 1.05 8.14 -51.93 -0.42 0.62 16 32 H 0.07 1.20 8.14 -51.93 -0.42 0.78 16 33 H 0.05 1.20 7.38 -51.93 -0.38 0.81 16 34 H 0.05 1.17 7.51 -51.93 -0.39 0.78 16 35 H 0.25 7.03 8.31 -40.82 -0.34 6.69 16 36 H 0.03 0.63 8.14 -51.93 -0.42 0.21 16 37 H 0.04 0.94 8.14 -51.93 -0.42 0.51 16 LS Contribution 329.51 15.07 4.97 4.97 Total: -1.00 -31.41 329.51 -8.82 -40.24 By element: Atomic # 1 Polarization: 6.69 SS G_CDS: -4.42 Total: 2.27 kcal Atomic # 6 Polarization: 15.05 SS G_CDS: -2.60 Total: 12.45 kcal Atomic # 7 Polarization: -65.83 SS G_CDS: -0.46 Total: -66.29 kcal Atomic # 8 Polarization: -9.38 SS G_CDS: 0.07 Total: -9.31 kcal Atomic # 14 Polarization: 22.07 SS G_CDS: -5.02 Total: 17.05 kcal Atomic # 17 Polarization: -0.02 SS G_CDS: -1.36 Total: -1.38 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -31.41 -8.82 -40.24 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001015799710.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.281 kcal (2) G-P(sol) polarization free energy of solvation -31.415 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.866 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.822 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.236 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.044 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds