Wall clock time and date at job start Tue Mar 31 2020 11:10:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.38533 * 119.99843 * 2 1 4 4 N 1.32991 * 120.52540 * 359.44720 * 3 2 1 5 5 C 1.31872 * 120.67355 * 179.76394 * 4 3 2 6 6 Cl 1.73605 * 119.10186 * 180.23898 * 5 4 3 7 7 N 1.31919 * 121.79967 * 0.52685 * 5 4 3 8 8 C 1.32547 * 120.99351 * 359.73028 * 7 5 4 9 9 C 1.38117 * 119.21650 * 0.02562 * 8 7 5 10 10 C 1.50700 * 120.82008 * 180.02562 * 9 8 7 11 11 N 1.46899 * 109.46787 * 259.97547 * 10 9 8 12 12 C 1.46844 * 111.00221 * 45.78395 * 11 10 9 13 13 C 1.53037 * 109.52384 * 185.83919 * 12 11 10 14 14 C 1.53125 * 109.28047 * 300.82442 * 13 12 11 15 15 C 1.50694 * 109.57413 * 177.58969 * 14 13 12 16 16 H 1.08005 * 120.00217 * 240.28349 * 15 14 13 17 17 C 1.37884 * 120.00286 * 60.28596 * 15 14 13 18 18 N 1.31512 * 119.99440 * 359.97438 * 17 15 14 19 19 Si 1.86798 * 119.99850 * 179.97438 * 17 15 14 20 20 H 1.48498 * 109.47320 * 90.00332 * 19 17 15 21 21 H 1.48504 * 109.46716 * 210.00051 * 19 17 15 22 22 H 1.48497 * 109.47401 * 329.99946 * 19 17 15 23 23 C 1.53120 * 109.15738 * 57.65309 * 14 13 12 24 24 C 1.46845 * 111.00147 * 169.99897 * 11 10 9 25 25 H 1.09009 * 109.47454 * 300.27416 * 1 2 3 26 26 H 1.08998 * 109.47492 * 60.27711 * 1 2 3 27 27 H 1.08998 * 109.47377 * 180.27901 * 1 2 3 28 28 H 0.97001 * 119.99790 * 179.71934 * 2 1 3 29 29 H 1.08003 * 120.39118 * 180.02562 * 8 7 5 30 30 H 1.08998 * 109.47200 * 19.96816 * 10 9 8 31 31 H 1.08997 * 109.47470 * 139.97331 * 10 9 8 32 32 H 1.08995 * 109.46618 * 305.85601 * 12 11 10 33 33 H 1.09005 * 109.46122 * 65.83148 * 12 11 10 34 34 H 1.09000 * 109.50685 * 180.87929 * 13 12 11 35 35 H 1.09004 * 109.50314 * 60.76335 * 13 12 11 36 36 H 1.08993 * 109.52294 * 297.75008 * 14 13 12 37 37 H 0.96998 * 119.99408 * 179.97438 * 18 17 15 38 38 H 1.09003 * 109.49738 * 182.40629 * 23 14 13 39 39 H 1.09000 * 109.53478 * 62.30681 * 23 14 13 40 40 H 1.08999 * 109.46418 * 294.17799 * 24 11 10 41 41 H 1.09000 * 109.46068 * 54.14911 * 24 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1576 1.1998 0.0000 4 7 1.5033 2.3575 -0.0111 5 6 2.1596 3.5013 -0.0064 6 17 1.2642 4.9886 -0.0149 7 7 3.4780 3.5462 -0.0011 8 6 4.1988 2.4339 0.0051 9 6 3.5538 1.2126 0.0055 10 6 4.3376 -0.0746 0.0131 11 7 4.3931 -0.6220 -1.3490 12 6 4.7255 0.4246 -2.3238 13 6 4.6317 -0.1472 -3.7402 14 6 5.6023 -1.3238 -3.8757 15 6 5.4728 -1.9295 -5.2494 16 1 5.1792 -2.9632 -5.3584 17 6 5.7292 -1.1642 -6.3673 18 7 6.0863 0.0945 -6.2346 19 14 5.5694 -1.9153 -8.0702 20 1 4.1821 -1.7281 -8.5656 21 1 6.5199 -1.2488 -8.9963 22 1 5.8793 -3.3660 -8.0024 23 6 5.2647 -2.3780 -2.8177 24 6 5.3401 -1.7415 -1.4281 25 1 -0.3634 0.5181 0.8876 26 1 -0.3634 0.5095 -0.8924 27 1 -0.3634 -1.0276 0.0050 28 1 1.9500 -0.8401 0.0041 29 1 5.2778 2.4820 0.0099 30 1 5.3498 0.1185 0.3684 31 1 3.8513 -0.7923 0.6737 32 1 4.0253 1.2535 -2.2198 33 1 5.7395 0.7810 -2.1425 34 1 4.8937 0.6256 -4.4628 35 1 3.6145 -0.4913 -3.9272 36 1 6.6234 -0.9727 -3.7271 37 1 6.2671 0.6328 -7.0210 38 1 5.9790 -3.1990 -2.8812 39 1 4.2575 -2.7577 -2.9899 40 1 6.3512 -1.3750 -1.2508 41 1 5.0862 -2.4859 -0.6735 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001142491500.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:10:26 Heat of formation + Delta-G solvation = 45.528323 kcal Electronic energy + Delta-G solvation = -23866.260865 eV Core-core repulsion = 20420.828400 eV Total energy + Delta-G solvation = -3445.432465 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 310.126 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.18666 -38.33924 -37.03292 -36.30511 -34.52806 -32.92978 -32.10866 -30.49587 -29.84648 -26.95853 -26.71961 -24.87510 -23.08528 -22.80867 -22.05997 -20.99523 -18.89629 -18.43524 -17.74845 -16.46038 -15.82685 -15.79869 -15.12463 -14.93878 -14.76143 -14.43790 -14.09051 -13.92138 -13.65664 -13.26081 -13.01775 -12.49420 -12.35706 -12.25300 -12.00933 -11.86467 -11.49890 -11.47865 -11.19920 -10.98021 -10.85882 -10.78288 -10.46593 -10.27209 -10.01680 -9.72836 -9.48583 -9.29164 -9.00944 -8.74602 -8.31488 -8.20556 -7.84590 -5.98710 -4.04303 0.80402 1.27982 1.40782 3.04346 3.30375 3.37447 3.39942 3.66329 4.18726 4.36637 4.44214 4.55287 4.79741 4.84493 5.07919 5.15910 5.31703 5.43380 5.53277 5.58969 5.70466 5.71516 5.80999 6.01980 6.09019 6.14083 6.23186 6.54634 6.55634 6.57699 6.78720 6.91361 7.01063 7.07770 7.37062 7.43341 7.52188 7.57427 7.78395 8.01092 8.02565 8.12928 8.45913 8.99335 9.60422 11.07453 Molecular weight = 310.13amu Principal moments of inertia in cm(-1) A = 0.016009 B = 0.003716 C = 0.003445 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1748.556729 B = 7532.688811 C = 8124.780228 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.097 3.903 2 N -0.699 5.699 3 C 0.469 3.531 4 N -0.567 5.567 5 C 0.402 3.598 6 Cl 0.013 6.987 7 N -0.547 5.547 8 C 0.193 3.807 9 C -0.239 4.239 10 C 0.106 3.894 11 N -0.532 5.532 12 C 0.059 3.941 13 C -0.102 4.102 14 C 0.049 3.951 15 C -0.512 4.512 16 H 0.054 0.946 17 C 0.061 3.939 18 N -0.891 5.891 19 Si 0.889 3.111 20 H -0.281 1.281 21 H -0.287 1.287 22 H -0.275 1.275 23 C -0.105 4.105 24 C 0.060 3.940 25 H 0.057 0.943 26 H 0.061 0.939 27 H 0.074 0.926 28 H 0.421 0.579 29 H 0.171 0.829 30 H 0.046 0.954 31 H 0.076 0.924 32 H 0.051 0.949 33 H 0.024 0.976 34 H 0.092 0.908 35 H 0.040 0.960 36 H 0.021 0.979 37 H 0.259 0.741 38 H 0.051 0.949 39 H 0.056 0.944 40 H 0.027 0.973 41 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.676 2.264 16.114 17.992 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.331 5.331 3 C 0.223 3.777 4 N -0.295 5.295 5 C 0.107 3.893 6 Cl 0.041 6.959 7 N -0.269 5.269 8 C 0.032 3.968 9 C -0.250 4.250 10 C -0.023 4.023 11 N -0.257 5.257 12 C -0.068 4.068 13 C -0.141 4.141 14 C 0.030 3.970 15 C -0.550 4.550 16 H 0.072 0.928 17 C -0.140 4.140 18 N -0.530 5.530 19 Si 0.717 3.283 20 H -0.208 1.208 21 H -0.213 1.213 22 H -0.200 1.200 23 C -0.143 4.143 24 C -0.067 4.067 25 H 0.076 0.924 26 H 0.079 0.921 27 H 0.093 0.907 28 H 0.260 0.740 29 H 0.188 0.812 30 H 0.064 0.936 31 H 0.094 0.906 32 H 0.070 0.930 33 H 0.042 0.958 34 H 0.110 0.890 35 H 0.059 0.941 36 H 0.039 0.961 37 H 0.069 0.931 38 H 0.069 0.931 39 H 0.075 0.925 40 H 0.045 0.955 41 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -8.877 3.166 15.866 18.454 hybrid contribution 1.184 -0.871 -0.855 1.700 sum -7.693 2.295 15.011 17.023 Atomic orbital electron populations 1.21554 0.78869 1.02068 1.02280 1.44341 1.06926 1.04556 1.77307 1.18023 0.87373 0.85935 0.86335 1.67235 1.41211 0.96733 1.24371 1.22433 0.86430 0.87401 0.93065 1.98414 1.73250 1.28125 1.96124 1.67891 1.05855 1.32525 1.20582 1.22789 1.00210 0.85505 0.88293 1.20886 0.93476 0.98162 1.12482 1.20765 0.97552 0.91353 0.92629 1.62231 1.51100 1.09925 1.02449 1.22283 0.97316 0.92682 0.94498 1.21650 0.99472 1.01165 0.91765 1.18676 0.94672 0.91105 0.92542 1.21191 1.45928 0.97110 0.90794 0.92793 1.24966 0.95103 0.94878 0.99006 1.69869 1.46981 1.06772 1.29380 0.86646 0.77855 0.79331 0.84469 1.20751 1.21297 1.19984 1.21670 1.00814 0.98901 0.92934 1.22147 0.92790 0.92405 0.99407 0.92408 0.92076 0.90711 0.73971 0.81156 0.93578 0.90590 0.93027 0.95777 0.89026 0.94073 0.96132 0.93060 0.93080 0.92535 0.95459 0.92316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.90 10.76 59.85 0.64 1.54 16 2 N -0.70 -7.92 5.78 -67.05 -0.39 -8.31 16 3 C 0.47 6.44 7.50 -154.78 -1.16 5.28 16 4 N -0.57 -8.42 9.67 -10.87 -0.11 -8.52 16 5 C 0.40 6.02 8.18 -91.98 -0.75 5.27 16 6 Cl 0.01 0.17 29.27 -51.86 -1.52 -1.35 16 7 N -0.55 -8.22 10.40 -11.72 -0.12 -8.34 16 8 C 0.19 2.60 9.96 -17.29 -0.17 2.43 16 9 C -0.24 -3.17 3.72 -104.15 -0.39 -3.55 16 10 C 0.11 1.29 4.79 -4.98 -0.02 1.27 16 11 N -0.53 -8.28 4.80 -236.12 -1.13 -9.41 16 12 C 0.06 1.11 4.82 -3.84 -0.02 1.09 16 13 C -0.10 -2.37 5.12 -26.65 -0.14 -2.51 16 14 C 0.05 1.17 2.16 -91.65 -0.20 0.97 16 15 C -0.51 -13.83 8.56 -34.44 -0.29 -14.12 16 16 H 0.05 1.44 7.74 -52.48 -0.41 1.04 16 17 C 0.06 1.69 5.31 -17.82 -0.09 1.59 16 18 N -0.89 -25.30 11.37 55.43 0.63 -24.67 16 19 Si 0.89 21.21 29.54 -169.99 -5.02 16.19 16 20 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 21 H -0.29 -6.83 7.11 56.52 0.40 -6.43 16 22 H -0.27 -6.46 7.11 56.52 0.40 -6.06 16 23 C -0.11 -2.06 5.32 -26.65 -0.14 -2.21 16 24 C 0.06 0.95 5.42 -3.84 -0.02 0.93 16 25 H 0.06 0.53 8.14 -51.92 -0.42 0.10 16 26 H 0.06 0.65 8.14 -51.93 -0.42 0.23 16 27 H 0.07 0.51 8.14 -51.93 -0.42 0.08 16 28 H 0.42 4.35 7.19 -40.82 -0.29 4.06 16 29 H 0.17 1.90 8.06 -52.48 -0.42 1.48 16 30 H 0.05 0.53 7.98 -51.93 -0.41 0.11 16 31 H 0.08 0.78 7.20 -51.93 -0.37 0.40 16 32 H 0.05 0.98 6.03 -51.93 -0.31 0.67 16 33 H 0.02 0.46 8.14 -51.93 -0.42 0.04 16 34 H 0.09 2.42 6.17 -51.93 -0.32 2.10 16 35 H 0.04 0.99 8.14 -51.93 -0.42 0.57 16 36 H 0.02 0.54 8.14 -51.93 -0.42 0.12 16 37 H 0.26 7.08 8.31 -40.82 -0.34 6.74 16 38 H 0.05 0.97 8.14 -51.93 -0.42 0.55 16 39 H 0.06 1.13 8.14 -51.93 -0.42 0.71 16 40 H 0.03 0.44 8.14 -51.93 -0.42 0.02 16 41 H 0.06 0.78 8.12 -51.93 -0.42 0.36 16 LS Contribution 343.86 15.07 5.18 5.18 Total: -1.00 -29.52 343.86 -11.14 -40.66 By element: Atomic # 1 Polarization: 6.50 SS G_CDS: -5.91 Total: 0.59 kcal Atomic # 6 Polarization: 0.74 SS G_CDS: -2.76 Total: -2.01 kcal Atomic # 7 Polarization: -58.14 SS G_CDS: -1.12 Total: -59.26 kcal Atomic # 14 Polarization: 21.21 SS G_CDS: -5.02 Total: 16.19 kcal Atomic # 17 Polarization: 0.17 SS G_CDS: -1.52 Total: -1.35 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -29.52 -11.14 -40.66 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001142491500.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.187 kcal (2) G-P(sol) polarization free energy of solvation -29.521 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.666 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.138 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.659 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.528 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds