Wall clock time and date at job start Tue Mar 31 2020 10:15:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 O 1.21270 * 119.99966 * 2 1 4 4 N 1.34781 * 119.99789 * 180.02562 * 2 1 3 5 5 C 1.46495 * 119.99615 * 179.97438 * 4 2 1 6 6 H 1.09006 * 109.47274 * 179.97438 * 5 4 2 7 7 C 1.52995 * 109.47459 * 299.99896 * 5 4 2 8 8 C 1.52998 * 109.47285 * 295.00290 * 7 5 4 9 9 C 1.53001 * 109.47575 * 179.97438 * 8 7 5 10 10 C 1.52994 * 109.47404 * 175.00227 * 9 8 7 11 11 C 1.53001 * 109.46691 * 295.00283 * 9 8 7 12 12 C 1.50698 * 109.47209 * 60.00188 * 5 4 2 13 13 O 1.21277 * 120.00105 * 339.99929 * 12 5 4 14 14 N 1.34777 * 120.00024 * 159.99507 * 12 5 4 15 15 C 1.46500 * 119.99983 * 179.97438 * 14 12 5 16 16 C 1.53007 * 109.47074 * 178.19750 * 15 14 12 17 17 C 1.50693 * 115.55027 * 65.14224 * 16 15 14 18 18 H 1.07993 * 120.00529 * 265.40331 * 17 16 15 19 19 C 1.37886 * 119.99579 * 85.40057 * 17 16 15 20 20 N 1.31510 * 120.00036 * 353.54651 * 19 17 16 21 21 Si 1.86803 * 119.99726 * 173.54383 * 19 17 16 22 22 H 1.48498 * 109.47177 * 0.02562 * 21 19 17 23 23 H 1.48498 * 109.46719 * 119.99980 * 21 19 17 24 24 H 1.48497 * 109.47029 * 239.99776 * 21 19 17 25 25 C 1.53005 * 117.49617 * 279.47567 * 16 15 14 26 26 C 1.52999 * 117.49639 * 210.81967 * 16 15 14 27 27 H 1.09005 * 109.47184 * 180.02562 * 1 2 3 28 28 H 1.09004 * 109.46537 * 299.99827 * 1 2 3 29 29 H 1.08998 * 109.47298 * 60.00096 * 1 2 3 30 30 H 0.96998 * 119.99855 * 359.97438 * 4 2 1 31 31 H 1.08997 * 109.47073 * 54.99965 * 7 5 4 32 32 H 1.08998 * 109.47159 * 175.00203 * 7 5 4 33 33 H 1.08998 * 109.47299 * 299.99686 * 8 7 5 34 34 H 1.08998 * 109.47093 * 59.99873 * 8 7 5 35 35 H 1.08995 * 109.47045 * 54.99502 * 9 8 7 36 36 H 1.08995 * 109.47611 * 59.99621 * 10 9 8 37 37 H 1.09001 * 109.47196 * 179.97438 * 10 9 8 38 38 H 1.08999 * 109.46970 * 299.99298 * 10 9 8 39 39 H 1.09000 * 109.47786 * 59.99890 * 11 9 8 40 40 H 1.08998 * 109.47300 * 180.02562 * 11 9 8 41 41 H 1.09005 * 109.46893 * 299.99503 * 11 9 8 42 42 H 0.97003 * 119.99938 * 0.27717 * 14 12 5 43 43 H 1.08993 * 109.47545 * 298.19668 * 15 14 12 44 44 H 1.09003 * 109.46855 * 58.20303 * 15 14 12 45 45 H 0.96997 * 119.99658 * 185.05479 * 20 19 17 46 46 H 1.09002 * 117.50077 * 359.97438 * 25 16 15 47 47 H 1.08994 * 117.49736 * 145.02442 * 25 16 15 48 48 H 1.09007 * 117.49741 * 214.97885 * 26 16 15 49 49 H 1.09001 * 117.50110 * 359.97075 * 26 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 8 2.1134 1.0502 0.0000 4 7 2.1809 -1.1673 -0.0005 5 6 3.6459 -1.1672 -0.0011 6 1 4.0093 -2.1949 -0.0010 7 6 4.1554 -0.4457 -1.2503 8 6 3.7502 -1.2356 -2.4964 9 6 4.2592 -0.5138 -3.7458 10 6 3.9636 -1.3647 -4.9824 11 6 3.5545 0.8380 -3.8764 12 6 4.1487 -0.4571 1.2293 13 8 3.4205 0.3042 1.8302 14 7 5.4075 -0.6681 1.6620 15 6 5.8965 0.0226 2.8579 16 6 7.3293 -0.4244 3.1550 17 6 8.3567 -0.0438 2.1204 18 1 8.6217 -0.7419 1.3401 19 6 8.9584 1.1958 2.1699 20 7 8.5470 2.0922 3.0398 21 14 10.3580 1.6020 1.0013 22 1 10.6286 0.4321 0.1275 23 1 9.9804 2.7683 0.1632 24 1 11.5772 1.9286 1.7837 25 6 7.5171 -1.7589 3.8795 26 6 7.7741 -0.4435 4.6188 27 1 -0.3634 -1.0277 0.0005 28 1 -0.3632 0.5138 0.8901 29 1 -0.3634 0.5138 -0.8900 30 1 1.6959 -2.0073 -0.0005 31 1 3.7208 0.5528 -1.2959 32 1 5.2417 -0.3676 -1.2070 33 1 4.1848 -2.2341 -2.4510 34 1 2.6639 -1.3138 -2.5397 35 1 5.3344 -0.3563 -3.6616 36 1 2.8883 -1.5222 -5.0666 37 1 4.3258 -0.8502 -5.8725 38 1 4.4657 -2.3276 -4.8894 39 1 3.7651 1.4442 -2.9954 40 1 3.9167 1.3521 -4.7666 41 1 2.4792 0.6804 -3.9605 42 1 5.9912 -1.2740 1.1792 43 1 5.8796 1.0991 2.6881 44 1 5.2565 -0.2217 3.7057 45 1 8.9194 2.9878 3.0262 46 1 6.6199 -2.3182 4.1448 47 1 8.3840 -2.3613 3.6081 48 1 8.8101 -0.1810 4.8335 49 1 7.0462 -0.1371 5.3701 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000597610412.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:15:24 Heat of formation + Delta-G solvation = -73.752791 kcal Electronic energy + Delta-G solvation = -27080.263503 eV Core-core repulsion = 23428.322894 eV Total energy + Delta-G solvation = -3651.940609 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 310.204 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -40.21354 -38.23610 -36.97521 -36.54304 -34.46959 -33.19071 -31.95849 -31.57682 -29.27923 -27.34647 -27.17374 -25.71615 -24.73196 -22.39226 -21.23412 -20.81876 -19.85125 -19.48543 -18.98483 -17.37637 -16.82009 -15.88491 -15.72911 -15.33558 -14.80393 -14.73963 -14.52890 -14.29804 -14.09864 -13.79251 -13.59726 -13.25365 -13.08986 -12.85831 -12.56622 -12.51182 -12.31744 -11.95878 -11.90032 -11.65034 -11.57942 -11.41940 -11.25029 -11.00635 -10.88935 -10.70704 -10.62355 -10.52326 -10.50255 -10.26230 -9.74282 -9.54936 -9.30897 -8.94019 -8.60895 -8.47994 -8.20915 -7.98150 -6.05706 -4.14419 2.93656 3.22581 3.26560 3.35523 3.36985 3.40592 4.01850 4.37203 4.73133 4.81111 4.87606 4.93843 5.09959 5.20140 5.21492 5.23761 5.33040 5.38903 5.44344 5.46212 5.55981 5.65643 5.71683 5.78173 5.80130 5.84914 5.91838 6.05117 6.08147 6.13988 6.20778 6.35127 6.36970 6.49102 6.50243 6.60292 6.62615 6.69761 6.94234 7.11050 7.35604 7.47315 7.51837 7.67328 7.83524 8.35588 8.38296 8.56462 8.86332 9.02462 9.52483 11.02237 Molecular weight = 310.20amu Principal moments of inertia in cm(-1) A = 0.011566 B = 0.004398 C = 0.003603 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2420.377031 B = 6364.985712 C = 7768.946550 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C 0.512 3.488 3 O -0.509 6.509 4 N -0.722 5.722 5 C 0.135 3.865 6 H 0.101 0.899 7 C -0.137 4.137 8 C -0.106 4.106 9 C -0.098 4.098 10 C -0.145 4.145 11 C -0.148 4.148 12 C 0.491 3.509 13 O -0.528 6.528 14 N -0.705 5.705 15 C 0.167 3.833 16 C 0.029 3.971 17 C -0.500 4.500 18 H 0.060 0.940 19 C 0.074 3.926 20 N -0.873 5.873 21 Si 0.888 3.112 22 H -0.272 1.272 23 H -0.284 1.284 24 H -0.284 1.284 25 C -0.211 4.211 26 C -0.149 4.149 27 H 0.069 0.931 28 H 0.091 0.909 29 H 0.088 0.912 30 H 0.398 0.602 31 H 0.096 0.904 32 H 0.078 0.922 33 H 0.060 0.940 34 H 0.060 0.940 35 H 0.071 0.929 36 H 0.051 0.949 37 H 0.052 0.948 38 H 0.053 0.947 39 H 0.062 0.938 40 H 0.049 0.951 41 H 0.050 0.950 42 H 0.397 0.603 43 H 0.070 0.930 44 H 0.034 0.966 45 H 0.261 0.739 46 H 0.064 0.936 47 H 0.078 0.922 48 H 0.083 0.917 49 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.905 -10.141 -11.380 19.972 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C 0.299 3.701 3 O -0.382 6.382 4 N -0.375 5.375 5 C 0.026 3.974 6 H 0.119 0.881 7 C -0.175 4.175 8 C -0.143 4.143 9 C -0.117 4.117 10 C -0.202 4.202 11 C -0.206 4.206 12 C 0.274 3.726 13 O -0.404 6.404 14 N -0.355 5.355 15 C 0.044 3.956 16 C 0.028 3.972 17 C -0.537 4.537 18 H 0.078 0.922 19 C -0.130 4.130 20 N -0.509 5.509 21 Si 0.716 3.284 22 H -0.197 1.197 23 H -0.210 1.210 24 H -0.210 1.210 25 C -0.248 4.248 26 C -0.187 4.187 27 H 0.088 0.912 28 H 0.110 0.890 29 H 0.107 0.893 30 H 0.232 0.768 31 H 0.114 0.886 32 H 0.096 0.904 33 H 0.078 0.922 34 H 0.079 0.921 35 H 0.090 0.910 36 H 0.070 0.930 37 H 0.071 0.929 38 H 0.072 0.928 39 H 0.081 0.919 40 H 0.069 0.931 41 H 0.069 0.931 42 H 0.231 0.769 43 H 0.089 0.911 44 H 0.052 0.948 45 H 0.071 0.929 46 H 0.083 0.917 47 H 0.096 0.904 48 H 0.102 0.898 49 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges -12.918 -8.601 -10.807 18.912 hybrid contribution 0.904 -0.390 -0.674 1.194 sum -12.014 -8.992 -11.481 18.894 Atomic orbital electron populations 1.21818 0.92595 1.03488 1.04878 1.20541 0.90002 0.83778 0.75815 1.90742 1.69956 1.31092 1.46380 1.45724 1.05616 1.08791 1.77408 1.20867 0.81442 1.00531 0.94532 0.88069 1.22026 1.01963 1.01810 0.91726 1.21579 1.00820 0.98452 0.93484 1.21116 1.00591 0.95413 0.94567 1.21828 1.01272 0.99624 0.97519 1.21877 1.00034 0.96809 1.01846 1.20677 0.82763 0.83208 0.85914 1.90697 1.56348 1.35922 1.57419 1.45934 1.12558 1.47007 1.29997 1.20933 0.93404 0.97165 0.84148 1.19043 0.92045 0.93618 0.92460 1.20355 1.20979 1.00599 1.11809 0.92155 1.24985 0.96506 0.96454 0.95045 1.69983 1.42328 1.03716 1.34889 0.86599 0.82496 0.78428 0.80861 1.19694 1.21013 1.20968 1.23015 1.00889 0.91702 1.09184 1.22488 1.00970 0.99159 0.96088 0.91156 0.89025 0.89320 0.76778 0.88597 0.90356 0.92155 0.92117 0.91031 0.92989 0.92936 0.92819 0.91946 0.93141 0.93115 0.76916 0.91138 0.94805 0.92889 0.91746 0.90385 0.89850 0.91750 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.59 10.39 36.01 0.37 -1.22 16 2 C 0.51 7.32 6.70 -10.98 -0.07 7.25 16 3 O -0.51 -10.04 12.96 -17.92 -0.23 -10.27 16 4 N -0.72 -8.48 4.65 -54.94 -0.26 -8.73 16 5 C 0.14 1.83 3.01 -69.09 -0.21 1.63 16 6 H 0.10 1.04 8.14 -51.93 -0.42 0.62 16 7 C -0.14 -1.86 4.30 -26.73 -0.11 -1.98 16 8 C -0.11 -1.09 4.57 -26.73 -0.12 -1.21 16 9 C -0.10 -1.02 2.92 -90.62 -0.26 -1.28 16 10 C -0.15 -1.24 9.19 37.15 0.34 -0.90 16 11 C -0.15 -1.66 8.95 37.16 0.33 -1.32 16 12 C 0.49 9.39 6.82 -10.99 -0.07 9.31 16 13 O -0.53 -12.37 13.68 -17.93 -0.25 -12.62 16 14 N -0.70 -13.81 5.48 -60.29 -0.33 -14.14 16 15 C 0.17 3.89 5.50 -4.04 -0.02 3.86 16 16 C 0.03 0.69 1.38 -155.66 -0.21 0.47 16 17 C -0.50 -12.88 8.63 -34.44 -0.30 -13.18 16 18 H 0.06 1.52 7.82 -52.49 -0.41 1.11 16 19 C 0.07 1.99 5.39 -17.82 -0.10 1.90 16 20 N -0.87 -24.67 12.91 55.43 0.72 -23.96 16 21 Si 0.89 20.77 29.55 -169.99 -5.02 15.74 16 22 H -0.27 -6.20 7.11 56.52 0.40 -5.80 16 23 H -0.28 -6.72 7.11 56.52 0.40 -6.32 16 24 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 25 C -0.21 -4.37 9.96 -26.69 -0.27 -4.63 16 26 C -0.15 -3.44 9.42 -26.69 -0.25 -3.69 16 27 H 0.07 0.44 7.91 -51.93 -0.41 0.03 16 28 H 0.09 0.91 8.14 -51.93 -0.42 0.49 16 29 H 0.09 0.74 8.14 -51.93 -0.42 0.32 16 30 H 0.40 3.09 8.67 -40.82 -0.35 2.73 16 31 H 0.10 1.61 4.47 -51.93 -0.23 1.37 16 32 H 0.08 1.12 8.14 -51.93 -0.42 0.70 16 33 H 0.06 0.54 8.14 -51.93 -0.42 0.12 16 34 H 0.06 0.60 7.75 -51.93 -0.40 0.20 16 35 H 0.07 0.79 8.14 -51.93 -0.42 0.37 16 36 H 0.05 0.42 8.14 -51.93 -0.42 -0.01 16 37 H 0.05 0.43 8.14 -51.93 -0.42 0.01 16 38 H 0.05 0.43 8.14 -51.93 -0.42 0.00 16 39 H 0.06 0.83 6.56 -51.93 -0.34 0.49 16 40 H 0.05 0.51 8.14 -51.93 -0.42 0.09 16 41 H 0.05 0.53 8.14 -51.93 -0.42 0.11 16 42 H 0.40 6.98 8.36 -40.82 -0.34 6.64 16 43 H 0.07 1.93 8.14 -51.93 -0.42 1.51 16 44 H 0.03 0.79 8.09 -51.93 -0.42 0.37 16 45 H 0.26 7.11 8.32 -40.82 -0.34 6.77 16 46 H 0.06 1.22 8.14 -51.93 -0.42 0.80 16 47 H 0.08 1.58 8.14 -51.93 -0.42 1.16 16 48 H 0.08 2.04 8.14 -51.92 -0.42 1.62 16 49 H 0.06 1.43 8.14 -51.93 -0.42 1.00 16 LS Contribution 395.88 15.07 5.97 5.97 Total: -1.00 -33.57 395.88 -9.17 -42.74 By element: Atomic # 1 Polarization: 19.07 SS G_CDS: -8.81 Total: 10.25 kcal Atomic # 6 Polarization: -4.04 SS G_CDS: -0.96 Total: -4.99 kcal Atomic # 7 Polarization: -46.96 SS G_CDS: 0.13 Total: -46.83 kcal Atomic # 8 Polarization: -22.41 SS G_CDS: -0.48 Total: -22.89 kcal Atomic # 14 Polarization: 20.77 SS G_CDS: -5.02 Total: 15.74 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -33.57 -9.17 -42.74 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000597610412.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.009 kcal (2) G-P(sol) polarization free energy of solvation -33.571 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.580 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.173 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.744 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.753 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds