Wall clock time and date at job start Tue Mar 31 2020 10:04:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52998 * 109.46931 * 2 1 4 4 H 1.09007 * 109.47105 * 175.57563 * 3 2 1 5 5 C 1.50703 * 109.47176 * 55.58211 * 3 2 1 6 6 H 1.07998 * 119.99635 * 245.84426 * 5 3 2 7 7 C 1.37873 * 120.00497 * 65.83540 * 5 3 2 8 8 N 1.31519 * 119.99794 * 5.57435 * 7 5 3 9 9 Si 1.86800 * 120.00391 * 185.57420 * 7 5 3 10 10 H 1.48498 * 109.47056 * 270.00360 * 9 7 5 11 11 H 1.48500 * 109.46930 * 30.00205 * 9 7 5 12 12 H 1.48502 * 109.47095 * 150.00240 * 9 7 5 13 13 N 1.46899 * 109.47679 * 295.57784 * 3 2 1 14 14 C 1.46903 * 111.00130 * 180.69606 * 13 3 2 15 15 C 1.46899 * 110.99571 * 304.64860 * 13 3 2 16 16 C 1.50705 * 109.46882 * 174.93230 * 15 13 3 17 17 C 1.38260 * 119.99593 * 269.72690 * 16 15 13 18 18 C 1.38223 * 120.01960 * 179.72339 * 17 16 15 19 19 C 1.38237 * 120.00713 * 0.55130 * 18 17 16 20 20 C 1.38301 * 119.99029 * 359.72453 * 19 18 17 21 21 Br 1.89104 * 120.00658 * 180.02562 * 20 19 18 22 22 C 1.38193 * 119.99413 * 90.00464 * 16 15 13 23 23 H 1.09007 * 109.47341 * 64.93953 * 1 2 3 24 24 H 1.08998 * 109.47614 * 184.93940 * 1 2 3 25 25 H 1.09003 * 109.47330 * 304.94031 * 1 2 3 26 26 H 1.09003 * 109.47144 * 240.00586 * 2 1 3 27 27 H 1.08993 * 109.47144 * 120.00240 * 2 1 3 28 28 H 0.96997 * 119.99891 * 355.17476 * 8 7 5 29 29 H 1.09000 * 109.46736 * 60.00324 * 14 13 3 30 30 H 1.08999 * 109.46924 * 179.97438 * 14 13 3 31 31 H 1.08995 * 109.46986 * 299.99742 * 14 13 3 32 32 H 1.08998 * 109.47333 * 294.93246 * 15 13 3 33 33 H 1.09000 * 109.47261 * 54.93976 * 15 13 3 34 34 H 1.08003 * 119.98819 * 0.02562 * 17 16 15 35 35 H 1.08007 * 119.99401 * 180.27675 * 18 17 16 36 36 H 1.08002 * 120.00465 * 179.74383 * 19 18 17 37 37 H 1.07995 * 120.00571 * 359.97254 * 22 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 1 3.1271 1.4435 0.0793 5 6 1.4502 2.1838 1.1721 6 1 0.7634 3.0002 1.0044 7 6 1.7872 1.8197 2.4585 8 7 2.7052 0.9001 2.6624 9 14 0.9402 2.6323 3.9116 10 1 1.7041 3.8391 4.3183 11 1 -0.4381 3.0262 3.5241 12 1 0.8814 1.6776 5.0475 13 7 1.6395 2.1036 -1.2492 14 6 2.1271 3.4886 -1.2917 15 6 2.1046 1.3456 -2.4184 16 6 1.5712 1.9835 -3.6753 17 6 0.3548 1.5790 -4.1932 18 6 -0.1376 2.1678 -5.3427 19 6 0.5915 3.1534 -5.9814 20 6 1.8110 3.5543 -5.4669 21 35 2.8084 4.9031 -6.3398 22 6 2.3007 2.9687 -4.3132 23 1 -0.3634 0.4353 -0.9310 24 1 -0.3634 -1.0238 0.0885 25 1 -0.3634 0.5886 0.8424 26 1 1.8933 -0.5138 -0.8901 27 1 1.8933 -0.5138 0.8899 28 1 3.0947 0.4284 1.9097 29 1 3.2152 3.4928 -1.2274 30 1 1.8170 3.9544 -2.2271 31 1 1.7113 4.0461 -0.4524 32 1 3.1943 1.3488 -2.4435 33 1 1.7457 0.3185 -2.3519 34 1 -0.2132 0.8061 -3.6966 35 1 -1.0900 1.8546 -5.7444 36 1 0.2087 3.6105 -6.8819 37 1 3.2528 3.2818 -3.9108 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000042440505.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:04:54 Heat of formation + Delta-G solvation = 25.764643 kcal Electronic energy + Delta-G solvation = -18301.462797 eV Core-core repulsion = 15510.734216 eV Total energy + Delta-G solvation = -2790.728581 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 311.058 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -39.54215 -37.29066 -33.74230 -32.32341 -31.31379 -30.78033 -29.29783 -26.83721 -26.05674 -23.97716 -22.57963 -22.37794 -20.89164 -19.12183 -16.85308 -16.60642 -15.64619 -15.08620 -14.91831 -14.37585 -13.79897 -13.71205 -13.48257 -13.10713 -12.90352 -12.43364 -12.21723 -11.82800 -11.55273 -11.29966 -11.14675 -10.92755 -10.86797 -10.79369 -10.69508 -10.35437 -10.16084 -10.10913 -9.84791 -9.72029 -8.87475 -8.68792 -8.43692 -8.36691 -7.31091 -6.32817 -4.04133 1.13968 1.29607 1.57752 3.42988 3.47006 3.61885 3.63166 4.50723 4.73793 4.83859 5.01067 5.09331 5.31931 5.36716 5.40084 5.54872 5.80668 5.90822 6.03988 6.05378 6.16221 6.25842 6.27294 6.32224 6.34413 6.48878 6.66465 6.74358 6.83201 6.84433 7.03059 7.15514 7.28575 7.49380 7.83292 7.97652 8.33927 8.58981 8.88086 9.64934 11.02943 Molecular weight = 311.06amu Principal moments of inertia in cm(-1) A = 0.024716 B = 0.003628 C = 0.003372 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1132.577455 B = 7716.422497 C = 8301.686887 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C -0.118 4.118 3 C 0.204 3.796 4 H -0.010 1.010 5 C -0.575 4.575 6 H 0.057 0.943 7 C 0.020 3.980 8 N -0.915 5.915 9 Si 1.068 2.932 10 H -0.290 1.290 11 H -0.288 1.288 12 H -0.285 1.285 13 N -0.519 5.519 14 C 0.036 3.964 15 C 0.081 3.919 16 C -0.054 4.054 17 C -0.084 4.084 18 C -0.116 4.116 19 C -0.101 4.101 20 C -0.091 4.091 21 Br -0.063 7.063 22 C -0.086 4.086 23 H 0.043 0.957 24 H 0.019 0.981 25 H 0.067 0.933 26 H 0.025 0.975 27 H 0.063 0.937 28 H 0.270 0.730 29 H 0.010 0.990 30 H 0.048 0.952 31 H 0.076 0.924 32 H 0.031 0.969 33 H 0.087 0.913 34 H 0.130 0.870 35 H 0.129 0.871 36 H 0.127 0.873 37 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.225 4.104 -18.729 19.302 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C -0.157 4.157 3 C 0.098 3.902 4 H 0.008 0.992 5 C -0.613 4.613 6 H 0.075 0.925 7 C -0.184 4.184 8 N -0.553 5.553 9 Si 0.897 3.103 10 H -0.217 1.217 11 H -0.214 1.214 12 H -0.211 1.211 13 N -0.243 5.243 14 C -0.112 4.112 15 C -0.047 4.047 16 C -0.056 4.056 17 C -0.103 4.103 18 C -0.135 4.135 19 C -0.121 4.121 20 C -0.170 4.170 21 Br 0.022 6.978 22 C -0.106 4.106 23 H 0.062 0.938 24 H 0.038 0.962 25 H 0.086 0.914 26 H 0.044 0.956 27 H 0.081 0.919 28 H 0.082 0.918 29 H 0.028 0.972 30 H 0.067 0.933 31 H 0.095 0.905 32 H 0.049 0.951 33 H 0.105 0.895 34 H 0.148 0.852 35 H 0.147 0.853 36 H 0.145 0.855 37 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -2.370 4.689 -17.384 18.161 hybrid contribution 0.757 -0.341 -1.470 1.689 sum -1.613 4.348 -18.854 19.416 Atomic orbital electron populations 1.21471 0.96121 0.98055 1.02200 1.21716 0.96725 0.98270 0.98959 1.19453 0.93117 0.91137 0.86527 0.99231 1.21806 1.29941 1.18630 0.90959 0.92511 1.25698 0.95604 0.96978 1.00111 1.70777 1.24464 1.24491 1.35520 0.83555 0.75621 0.75699 0.75461 1.21659 1.21371 1.21115 1.62112 1.59131 1.01660 1.01440 1.22268 0.96628 0.91049 1.01298 1.21211 0.96750 0.98431 0.88324 1.19998 0.94449 0.95286 0.95828 1.21219 0.94892 0.99343 0.94882 1.21133 0.99823 0.96568 0.95968 1.21008 0.93219 0.97753 1.00155 1.21685 0.97348 0.99152 0.98781 1.96672 1.72614 1.50169 1.78312 1.21053 1.00316 0.95790 0.93468 0.93787 0.96197 0.91450 0.95645 0.91853 0.91848 0.97178 0.93349 0.90486 0.95100 0.89473 0.85225 0.85345 0.85486 0.85443 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -2.52 9.53 37.16 0.35 -2.16 16 2 C -0.12 -2.62 5.03 -26.73 -0.13 -2.76 16 3 C 0.20 4.86 1.39 -68.87 -0.10 4.77 16 4 H -0.01 -0.26 7.64 -51.93 -0.40 -0.66 16 5 C -0.57 -15.18 6.17 -34.44 -0.21 -15.40 16 6 H 0.06 1.54 6.97 -52.49 -0.37 1.17 16 7 C 0.02 0.55 5.28 -17.82 -0.09 0.45 16 8 N -0.92 -26.54 13.20 55.43 0.73 -25.81 16 9 Si 1.07 24.68 29.91 -169.99 -5.08 19.60 16 10 H -0.29 -6.54 7.11 56.52 0.40 -6.14 16 11 H -0.29 -6.38 7.11 56.52 0.40 -5.97 16 12 H -0.29 -6.63 7.11 56.52 0.40 -6.22 16 13 N -0.52 -10.63 4.17 -237.73 -0.99 -11.62 16 14 C 0.04 0.71 8.84 60.07 0.53 1.24 16 15 C 0.08 1.39 4.80 -4.97 -0.02 1.37 16 16 C -0.05 -0.81 4.73 -104.63 -0.50 -1.31 16 17 C -0.08 -1.13 9.70 -39.58 -0.38 -1.51 16 18 C -0.12 -1.33 10.05 -39.59 -0.40 -1.73 16 19 C -0.10 -1.18 9.79 -39.56 -0.39 -1.57 16 20 C -0.09 -1.17 6.22 -39.52 -0.25 -1.42 16 21 Br -0.06 -0.73 33.70 -68.01 -2.29 -3.02 16 22 C -0.09 -1.22 7.54 -39.56 -0.30 -1.52 16 23 H 0.04 0.86 7.88 -51.93 -0.41 0.45 16 24 H 0.02 0.36 8.14 -51.93 -0.42 -0.06 16 25 H 0.07 1.56 6.90 -51.93 -0.36 1.20 16 26 H 0.03 0.50 5.98 -51.93 -0.31 0.19 16 27 H 0.06 1.55 6.19 -51.93 -0.32 1.23 16 28 H 0.27 7.78 5.64 -40.82 -0.23 7.55 16 29 H 0.01 0.19 8.14 -51.93 -0.42 -0.23 16 30 H 0.05 0.85 5.80 -51.93 -0.30 0.55 16 31 H 0.08 1.64 6.62 -51.93 -0.34 1.30 16 32 H 0.03 0.54 8.09 -51.93 -0.42 0.12 16 33 H 0.09 1.48 5.79 -51.93 -0.30 1.18 16 34 H 0.13 1.63 8.06 -52.48 -0.42 1.21 16 35 H 0.13 1.13 8.06 -52.48 -0.42 0.70 16 36 H 0.13 1.21 8.06 -52.49 -0.42 0.79 16 37 H 0.13 1.80 8.02 -52.49 -0.42 1.38 16 LS Contribution 313.35 15.07 4.72 4.72 Total: -1.00 -28.05 313.35 -9.89 -37.93 By element: Atomic # 1 Polarization: 4.83 SS G_CDS: -5.09 Total: -0.26 kcal Atomic # 6 Polarization: -19.65 SS G_CDS: -1.88 Total: -21.54 kcal Atomic # 7 Polarization: -37.17 SS G_CDS: -0.26 Total: -37.43 kcal Atomic # 14 Polarization: 24.68 SS G_CDS: -5.08 Total: 19.60 kcal Atomic # 35 Polarization: -0.73 SS G_CDS: -2.29 Total: -3.02 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -28.05 -9.89 -37.93 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000042440505.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.697 kcal (2) G-P(sol) polarization free energy of solvation -28.046 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.651 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.886 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.933 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.765 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds