Wall clock time and date at job start Tue Mar 31 2020 10:04:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53004 * 109.46948 * 2 1 4 4 H 1.09000 * 109.46796 * 175.35111 * 3 2 1 5 5 C 1.50698 * 109.47135 * 55.35127 * 3 2 1 6 6 H 1.08004 * 119.99820 * 240.00162 * 5 3 2 7 7 C 1.37878 * 120.00010 * 59.99343 * 5 3 2 8 8 N 1.31510 * 120.00339 * 0.02562 * 7 5 3 9 9 Si 1.86806 * 119.99883 * 179.97438 * 7 5 3 10 10 H 1.48492 * 109.47054 * 60.00357 * 9 7 5 11 11 H 1.48502 * 109.47131 * 180.02562 * 9 7 5 12 12 H 1.48496 * 109.47107 * 300.00434 * 9 7 5 13 13 N 1.46892 * 109.47105 * 295.35085 * 3 2 1 14 14 C 1.46895 * 111.00076 * 171.32639 * 13 3 2 15 15 C 1.46905 * 111.00050 * 295.27925 * 13 3 2 16 16 C 1.50693 * 109.47141 * 175.10608 * 15 13 3 17 17 C 1.38244 * 120.00995 * 100.65856 * 16 15 13 18 18 C 1.38214 * 120.01551 * 179.97438 * 17 16 15 19 19 C 1.38268 * 120.01777 * 0.02562 * 18 17 16 20 20 C 1.38193 * 120.00907 * 359.97438 * 19 18 17 21 21 C 1.38307 * 120.00521 * 280.37328 * 16 15 13 22 22 Br 1.89099 * 120.00890 * 0.03433 * 21 16 15 23 23 H 1.09003 * 109.47222 * 53.98251 * 1 2 3 24 24 H 1.08996 * 109.47374 * 293.98123 * 1 2 3 25 25 H 1.09003 * 109.47177 * 173.98452 * 1 2 3 26 26 H 1.08998 * 109.46959 * 119.99966 * 2 1 3 27 27 H 1.09000 * 109.47360 * 240.00079 * 2 1 3 28 28 H 0.97003 * 120.00209 * 179.97438 * 8 7 5 29 29 H 1.09000 * 109.47538 * 59.99589 * 14 13 3 30 30 H 1.09004 * 109.47562 * 179.97438 * 14 13 3 31 31 H 1.08998 * 109.47259 * 299.99767 * 14 13 3 32 32 H 1.09001 * 109.46878 * 295.10251 * 15 13 3 33 33 H 1.08996 * 109.47421 * 55.10116 * 15 13 3 34 34 H 1.08000 * 119.99273 * 359.94933 * 17 16 15 35 35 H 1.07996 * 119.99187 * 179.97438 * 18 17 16 36 36 H 1.07994 * 119.99372 * 179.97438 * 19 18 17 37 37 H 1.08003 * 120.00220 * 180.02562 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 3.1268 1.4436 0.0833 5 6 1.4458 2.1854 1.1688 6 1 0.8351 3.0598 0.9988 7 6 1.6816 1.7486 2.4551 8 7 2.4255 0.6841 2.6622 9 14 0.9457 2.6699 3.9040 10 1 -0.5349 2.6690 3.7907 11 1 1.3461 2.0036 5.1693 12 1 1.4412 4.0697 3.9039 13 7 1.6441 2.1018 -1.2515 14 6 1.9344 3.5410 -1.2032 15 6 2.2960 1.4718 -2.4075 16 6 1.7759 2.0934 -3.6779 17 6 2.5245 3.0513 -4.3360 18 6 2.0478 3.6211 -5.5015 19 6 0.8216 3.2336 -6.0096 20 6 0.0725 2.2761 -5.3526 21 6 0.5520 1.7013 -4.1891 22 35 -0.4695 0.3859 -3.2934 23 1 -0.3634 0.6043 -0.8312 24 1 -0.3634 0.4177 0.9389 25 1 -0.3634 -1.0220 -0.1077 26 1 1.8933 -0.5138 0.8900 27 1 1.8934 -0.5138 -0.8900 28 1 2.5917 0.3770 3.5672 29 1 3.0034 3.6912 -1.0519 30 1 1.6321 4.0045 -2.1423 31 1 1.3837 3.9953 -0.3795 32 1 3.3736 1.6230 -2.3438 33 1 2.0784 0.4038 -2.4099 34 1 3.4820 3.3548 -3.9390 35 1 2.6328 4.3696 -6.0150 36 1 0.4493 3.6794 -6.9201 37 1 -0.8851 1.9733 -5.7498 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000042441081.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:04:57 Heat of formation + Delta-G solvation = 35.422373 kcal Electronic energy + Delta-G solvation = -18675.133025 eV Core-core repulsion = 15884.823234 eV Total energy + Delta-G solvation = -2790.309791 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 311.058 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -39.39950 -36.97717 -33.37884 -32.09965 -31.29401 -30.58260 -28.97880 -26.84100 -26.04728 -24.04822 -22.32051 -22.10133 -20.82239 -18.81938 -16.61637 -15.99125 -15.60048 -15.17619 -14.84181 -14.11747 -13.92966 -13.58994 -13.36614 -12.81410 -12.56513 -12.37544 -11.97731 -11.84649 -11.31118 -11.18874 -11.07090 -10.92875 -10.83965 -10.64865 -10.42582 -10.08093 -9.94829 -9.78410 -9.50030 -9.06647 -8.82758 -8.64893 -8.40763 -8.29691 -7.08958 -5.96354 -3.98917 1.25666 1.39208 2.03833 3.34065 3.38689 3.41639 3.72495 4.44669 4.86114 4.92944 5.00309 5.23657 5.35805 5.37315 5.51213 5.73986 5.89088 6.00289 6.19697 6.28247 6.31929 6.42466 6.47061 6.58585 6.66097 6.77297 6.86159 6.92129 6.92740 7.31009 7.40989 7.52675 7.73470 7.87320 7.89193 8.20298 8.38558 8.64159 9.05388 9.64223 11.10410 Molecular weight = 311.06amu Principal moments of inertia in cm(-1) A = 0.021209 B = 0.005685 C = 0.004937 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1319.902527 B = 4923.750896 C = 5670.213637 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 C -0.102 4.102 3 C 0.218 3.782 4 H -0.004 1.004 5 C -0.498 4.498 6 H 0.063 0.937 7 C 0.062 3.938 8 N -0.892 5.892 9 Si 0.891 3.109 10 H -0.277 1.277 11 H -0.289 1.289 12 H -0.279 1.279 13 N -0.519 5.519 14 C 0.036 3.964 15 C 0.077 3.923 16 C -0.035 4.035 17 C -0.113 4.113 18 C -0.110 4.110 19 C -0.126 4.126 20 C -0.098 4.098 21 C -0.073 4.073 22 Br -0.031 7.031 23 H 0.063 0.937 24 H 0.050 0.950 25 H 0.007 0.993 26 H 0.084 0.916 27 H 0.013 0.987 28 H 0.260 0.740 29 H 0.010 0.990 30 H 0.041 0.959 31 H 0.077 0.923 32 H 0.031 0.969 33 H 0.091 0.909 34 H 0.125 0.875 35 H 0.123 0.877 36 H 0.124 0.876 37 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.825 1.782 -16.334 16.672 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C -0.141 4.141 3 C 0.113 3.887 4 H 0.014 0.986 5 C -0.536 4.536 6 H 0.081 0.919 7 C -0.139 4.139 8 N -0.531 5.531 9 Si 0.719 3.281 10 H -0.203 1.203 11 H -0.215 1.215 12 H -0.205 1.205 13 N -0.243 5.243 14 C -0.112 4.112 15 C -0.051 4.051 16 C -0.037 4.037 17 C -0.132 4.132 18 C -0.129 4.129 19 C -0.146 4.146 20 C -0.118 4.118 21 C -0.153 4.153 22 Br 0.055 6.945 23 H 0.082 0.918 24 H 0.069 0.931 25 H 0.026 0.974 26 H 0.102 0.898 27 H 0.031 0.969 28 H 0.069 0.931 29 H 0.028 0.972 30 H 0.060 0.940 31 H 0.095 0.905 32 H 0.049 0.951 33 H 0.109 0.891 34 H 0.143 0.857 35 H 0.141 0.859 36 H 0.142 0.858 37 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -3.643 1.095 -15.860 16.310 hybrid contribution 0.775 0.908 0.763 1.417 sum -2.868 2.003 -15.097 15.497 Atomic orbital electron populations 1.21642 0.97285 0.97142 1.02427 1.21456 0.95510 0.97776 0.99319 1.19278 0.93399 0.91549 0.84498 0.98634 1.21054 1.30934 1.11872 0.89751 0.91925 1.24872 0.95330 0.95079 0.98662 1.69883 1.38507 1.23682 1.21015 0.86671 0.79702 0.79831 0.81864 1.20254 1.21465 1.20477 1.62152 1.57167 1.02147 1.02833 1.22255 0.98127 0.90182 1.00674 1.21257 0.95572 0.99930 0.88297 1.19964 0.92650 0.95103 0.96010 1.21106 1.00151 0.96503 0.95478 1.21172 0.96125 0.99530 0.96066 1.21043 0.95152 0.98104 1.00261 1.21087 0.99916 0.96638 0.94130 1.21797 0.96267 1.00046 0.97205 1.96737 1.69801 1.50648 1.77305 0.91811 0.93062 0.97392 0.89755 0.96861 0.93056 0.97172 0.94018 0.90484 0.95071 0.89079 0.85682 0.85937 0.85787 0.85503 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.88 9.28 37.16 0.34 -2.54 16 2 C -0.10 -2.44 5.32 -26.73 -0.14 -2.58 16 3 C 0.22 5.35 1.77 -68.87 -0.12 5.23 16 4 H 0.00 -0.11 8.13 -51.93 -0.42 -0.53 16 5 C -0.50 -13.18 6.57 -34.44 -0.23 -13.41 16 6 H 0.06 1.67 6.07 -52.48 -0.32 1.35 16 7 C 0.06 1.67 5.29 -17.82 -0.09 1.58 16 8 N -0.89 -25.08 11.37 55.43 0.63 -24.45 16 9 Si 0.89 21.25 29.54 -169.99 -5.02 16.23 16 10 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 11 H -0.29 -6.89 7.11 56.52 0.40 -6.48 16 12 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 13 N -0.52 -10.83 3.99 -237.74 -0.95 -11.78 16 14 C 0.04 0.71 8.86 60.06 0.53 1.24 16 15 C 0.08 1.42 4.25 -4.98 -0.02 1.39 16 16 C -0.03 -0.55 4.35 -104.60 -0.46 -1.01 16 17 C -0.11 -1.53 8.63 -39.59 -0.34 -1.87 16 18 C -0.11 -1.26 10.05 -39.58 -0.40 -1.65 16 19 C -0.13 -1.40 10.05 -39.59 -0.40 -1.80 16 20 C -0.10 -1.24 9.79 -39.56 -0.39 -1.63 16 21 C -0.07 -1.11 6.22 -39.52 -0.25 -1.36 16 22 Br -0.03 -0.50 29.46 -68.01 -2.00 -2.50 16 23 H 0.06 1.37 4.91 -51.93 -0.26 1.11 16 24 H 0.05 1.27 7.31 -51.93 -0.38 0.89 16 25 H 0.01 0.15 8.14 -51.93 -0.42 -0.27 16 26 H 0.08 2.25 6.21 -51.93 -0.32 1.92 16 27 H 0.01 0.29 6.21 -51.93 -0.32 -0.04 16 28 H 0.26 7.05 8.31 -40.82 -0.34 6.71 16 29 H 0.01 0.19 8.14 -51.93 -0.42 -0.23 16 30 H 0.04 0.74 6.31 -51.93 -0.33 0.41 16 31 H 0.08 1.63 5.99 -51.93 -0.31 1.32 16 32 H 0.03 0.57 8.00 -51.93 -0.42 0.15 16 33 H 0.09 1.72 5.15 -51.93 -0.27 1.46 16 34 H 0.13 1.56 8.03 -52.49 -0.42 1.14 16 35 H 0.12 1.07 8.06 -52.49 -0.42 0.64 16 36 H 0.12 1.03 8.06 -52.49 -0.42 0.60 16 37 H 0.13 1.38 8.06 -52.48 -0.42 0.96 16 LS Contribution 307.19 15.07 4.63 4.63 Total: -1.00 -27.86 307.19 -9.68 -37.54 By element: Atomic # 1 Polarization: 3.74 SS G_CDS: -5.01 Total: -1.27 kcal Atomic # 6 Polarization: -16.44 SS G_CDS: -1.95 Total: -18.40 kcal Atomic # 7 Polarization: -35.91 SS G_CDS: -0.32 Total: -36.23 kcal Atomic # 14 Polarization: 21.25 SS G_CDS: -5.02 Total: 16.23 kcal Atomic # 35 Polarization: -0.50 SS G_CDS: -2.00 Total: -2.50 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -27.86 -9.68 -37.54 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000042441081.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.961 kcal (2) G-P(sol) polarization free energy of solvation -27.857 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.104 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.681 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.539 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.422 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds