Wall clock time and date at job start Tue Mar 31 2020 10:05:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.53008 * 109.47330 * 2 1 4 4 N 1.46491 * 109.47332 * 184.88204 * 3 2 1 5 5 C 1.36936 * 120.00255 * 94.55892 * 4 3 2 6 6 H 1.07992 * 119.99963 * 347.40524 * 5 4 3 7 7 C 1.38815 * 119.99916 * 167.13015 * 5 4 3 8 8 N 1.31615 * 120.00240 * 214.66523 * 7 5 4 9 9 Si 1.86798 * 119.99893 * 34.66856 * 7 5 4 10 10 H 1.48503 * 109.47218 * 49.41757 * 9 7 5 11 11 H 1.48497 * 109.47100 * 169.41928 * 9 7 5 12 12 H 1.48504 * 109.47301 * 289.41703 * 9 7 5 13 13 C 1.46502 * 119.99783 * 274.55177 * 4 3 2 14 14 C 1.50698 * 109.47306 * 262.99793 * 13 4 3 15 15 C 1.38263 * 119.99598 * 356.35446 * 14 13 4 16 16 C 1.38215 * 120.02038 * 180.02562 * 15 14 13 17 17 C 1.38242 * 120.01146 * 359.97438 * 16 15 14 18 18 C 1.38310 * 119.99024 * 0.02562 * 17 16 15 19 19 Br 1.89094 * 120.01281 * 180.02562 * 18 17 16 20 20 C 1.38202 * 119.99124 * 176.08143 * 14 13 4 21 21 C 1.50700 * 120.00813 * 359.97438 * 20 14 13 22 22 H 1.09005 * 109.47121 * 304.88595 * 1 2 3 23 23 H 1.08994 * 109.47516 * 64.88948 * 1 2 3 24 24 H 1.09007 * 109.47156 * 184.88756 * 1 2 3 25 25 H 1.09004 * 109.47701 * 240.00214 * 2 1 3 26 26 H 1.09000 * 109.47816 * 119.99781 * 2 1 3 27 27 H 1.08997 * 109.46647 * 64.87364 * 3 2 1 28 28 H 1.09002 * 109.46462 * 304.88194 * 3 2 1 29 29 H 0.96994 * 120.00407 * 180.02562 * 8 7 5 30 30 H 1.09002 * 109.47022 * 22.99714 * 13 4 3 31 31 H 1.09005 * 109.47287 * 142.99503 * 13 4 3 32 32 H 1.07999 * 119.98645 * 359.97438 * 15 14 13 33 33 H 1.07995 * 119.99445 * 179.97438 * 16 15 14 34 34 H 1.08001 * 120.00956 * 179.97438 * 17 16 15 35 35 H 1.09001 * 109.46938 * 94.03011 * 21 20 14 36 36 H 1.08998 * 109.46807 * 214.03041 * 21 20 14 37 37 H 1.09002 * 109.46912 * 334.02809 * 21 20 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 7 3.5002 1.4442 -0.1175 5 6 4.0880 1.5728 -1.3476 6 1 3.4939 1.4690 -2.2435 7 6 5.4464 1.8422 -1.4430 8 7 5.8998 2.6024 -2.4170 9 14 6.6310 1.1255 -0.1890 10 1 6.3768 -0.3303 -0.0434 11 1 8.0269 1.3409 -0.6473 12 1 6.4309 1.7963 1.1207 13 6 4.3317 1.3085 1.0810 14 6 4.7700 2.6735 1.5456 15 6 4.4367 3.7946 0.8082 16 6 4.8389 5.0467 1.2335 17 6 5.5742 5.1787 2.3967 18 6 5.9078 4.0575 3.1347 19 35 6.9129 4.2373 4.7262 20 6 5.5002 2.8049 2.7115 21 6 5.8576 1.5835 3.5187 22 1 -0.3634 0.5878 0.8430 23 1 -0.3634 0.4361 -0.9305 24 1 -0.3634 -1.0240 0.0876 25 1 1.8934 -0.5138 -0.8900 26 1 1.8934 -0.5138 0.8900 27 1 1.7497 1.9305 0.9304 28 1 1.6070 1.9809 -0.8431 29 1 6.8490 2.7903 -2.4839 30 1 3.7560 0.8239 1.8696 31 1 5.2090 0.7049 0.8482 32 1 3.8626 3.6918 -0.1008 33 1 4.5787 5.9221 0.6571 34 1 5.8888 6.1570 2.7288 35 1 6.8478 1.2327 3.2276 36 1 5.8588 1.8363 4.5789 37 1 5.1248 0.7982 3.3332 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000090549772.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:05:57 Heat of formation + Delta-G solvation = 74.335629 kcal Electronic energy + Delta-G solvation = -18843.998001 eV Core-core repulsion = 16055.375615 eV Total energy + Delta-G solvation = -2788.622385 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 311.058 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -39.46864 -36.45855 -33.40537 -32.82228 -31.92966 -30.85390 -28.94369 -26.84702 -26.04913 -25.59079 -22.46261 -21.05035 -20.68389 -19.82968 -16.94137 -16.13672 -15.91710 -15.23547 -14.47332 -14.16225 -14.00495 -13.70410 -13.35151 -12.66230 -12.63643 -12.54338 -12.14257 -12.06274 -11.94765 -11.80997 -11.29724 -10.95555 -10.87847 -10.79632 -10.59777 -10.44781 -10.10555 -10.08501 -9.95434 -9.85610 -8.90565 -8.51731 -8.04172 -7.83053 -7.24547 -6.02101 -3.22033 1.71960 1.82915 1.99028 3.37190 3.45434 3.59115 4.21444 4.55133 4.80575 5.21972 5.22669 5.25411 5.50604 5.57366 5.58622 5.71045 5.82780 5.85596 5.90173 6.02468 6.05711 6.08569 6.17457 6.23226 6.29246 6.42656 6.43706 6.44818 6.55830 6.71510 6.75695 6.94823 7.11186 7.30406 7.53886 7.88542 8.21220 8.86824 9.71278 10.01243 11.08834 Molecular weight = 311.06amu Principal moments of inertia in cm(-1) A = 0.017611 B = 0.005731 C = 0.005147 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1589.492422 B = 4884.538276 C = 5438.922500 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.149 4.149 3 C 0.157 3.843 4 N -0.605 5.605 5 C -0.286 4.286 6 H 0.092 0.908 7 C 0.043 3.957 8 N -0.880 5.880 9 Si 0.821 3.179 10 H -0.293 1.293 11 H -0.313 1.313 12 H -0.222 1.222 13 C 0.167 3.833 14 C -0.072 4.072 15 C -0.057 4.057 16 C -0.129 4.129 17 C -0.104 4.104 18 C -0.103 4.103 19 Br -0.077 7.077 20 C -0.057 4.057 21 C -0.122 4.122 22 H 0.048 0.952 23 H 0.051 0.949 24 H 0.044 0.956 25 H 0.063 0.937 26 H 0.048 0.952 27 H 0.039 0.961 28 H 0.059 0.941 29 H 0.262 0.738 30 H 0.061 0.939 31 H 0.056 0.944 32 H 0.156 0.844 33 H 0.122 0.878 34 H 0.120 0.880 35 H 0.071 0.929 36 H 0.069 0.931 37 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.795 2.308 13.221 13.709 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.189 4.189 3 C 0.031 3.969 4 N -0.326 5.326 5 C -0.412 4.412 6 H 0.110 0.890 7 C -0.158 4.158 8 N -0.520 5.520 9 Si 0.654 3.346 10 H -0.223 1.223 11 H -0.243 1.243 12 H -0.149 1.149 13 C 0.041 3.959 14 C -0.075 4.075 15 C -0.075 4.075 16 C -0.148 4.148 17 C -0.124 4.124 18 C -0.182 4.182 19 Br 0.008 6.992 20 C -0.060 4.060 21 C -0.179 4.179 22 H 0.067 0.933 23 H 0.070 0.930 24 H 0.063 0.937 25 H 0.081 0.919 26 H 0.067 0.933 27 H 0.057 0.943 28 H 0.077 0.923 29 H 0.071 0.929 30 H 0.079 0.921 31 H 0.073 0.927 32 H 0.173 0.827 33 H 0.140 0.860 34 H 0.138 0.862 35 H 0.090 0.910 36 H 0.088 0.912 37 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -2.292 2.478 13.682 14.093 hybrid contribution 0.845 -0.677 0.057 1.084 sum -1.446 1.802 13.739 13.932 Atomic orbital electron populations 1.21712 0.96954 1.00575 1.01237 1.22208 0.94251 1.00802 1.01672 1.20812 0.82941 0.93647 0.99523 1.44276 1.00438 1.85266 1.02574 1.18745 0.93245 1.45341 0.83917 0.89006 1.24572 0.97471 0.97407 0.96382 1.70081 1.14578 1.32198 1.35126 0.88303 0.80200 0.80581 0.85468 1.22273 1.24288 1.14862 1.20136 0.95167 0.91021 0.89545 1.20613 0.95763 0.98488 0.92673 1.21595 0.96536 0.90440 0.98919 1.21160 0.99470 0.98278 0.95934 1.20885 0.99321 0.96713 0.95516 1.21411 1.05396 0.95981 0.95409 1.96521 1.71988 1.98208 1.32496 1.19478 0.97486 0.93165 0.95858 1.20992 1.02158 0.95533 0.99201 0.93307 0.93022 0.93705 0.91854 0.93275 0.94261 0.92269 0.92859 0.92055 0.92686 0.82682 0.85972 0.86230 0.91018 0.91178 0.91244 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 39. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.91 9.91 37.15 0.37 -1.54 16 2 C -0.15 -2.41 6.26 -26.73 -0.17 -2.57 16 3 C 0.16 2.84 5.64 -4.04 -0.02 2.82 16 4 N -0.60 -13.12 1.52 -174.61 -0.27 -13.39 16 5 C -0.29 -7.40 8.90 -15.06 -0.13 -7.54 16 6 H 0.09 2.55 8.06 -52.49 -0.42 2.13 16 7 C 0.04 1.18 4.49 -17.43 -0.08 1.10 16 8 N -0.88 -25.70 13.97 55.49 0.78 -24.93 16 9 Si 0.82 20.42 23.61 -169.99 -4.01 16.41 16 10 H -0.29 -7.44 7.04 56.52 0.40 -7.04 16 11 H -0.31 -8.40 7.11 56.52 0.40 -7.99 16 12 H -0.22 -4.97 2.07 56.52 0.12 -4.85 16 13 C 0.17 3.42 4.06 -5.19 -0.02 3.40 16 14 C -0.07 -1.43 3.46 -104.63 -0.36 -1.79 16 15 C -0.06 -1.16 8.31 -39.58 -0.33 -1.48 16 16 C -0.13 -2.32 10.05 -39.59 -0.40 -2.72 16 17 C -0.10 -1.76 9.79 -39.55 -0.39 -2.15 16 18 C -0.10 -1.79 6.22 -39.51 -0.25 -2.03 16 19 Br -0.08 -1.13 31.88 -68.01 -2.17 -3.29 16 20 C -0.06 -1.05 4.72 -104.59 -0.49 -1.54 16 21 C -0.12 -1.93 8.59 36.01 0.31 -1.62 16 22 H 0.05 0.58 8.14 -51.93 -0.42 0.16 16 23 H 0.05 0.65 8.14 -51.93 -0.42 0.23 16 24 H 0.04 0.53 8.14 -51.93 -0.42 0.11 16 25 H 0.06 1.13 8.14 -51.93 -0.42 0.71 16 26 H 0.05 0.78 8.14 -51.93 -0.42 0.36 16 27 H 0.04 0.65 8.11 -51.93 -0.42 0.23 16 28 H 0.06 1.09 8.00 -51.93 -0.42 0.67 16 29 H 0.26 7.48 8.31 -40.82 -0.34 7.14 16 30 H 0.06 1.11 7.17 -51.93 -0.37 0.74 16 31 H 0.06 1.24 2.38 -51.93 -0.12 1.12 16 32 H 0.16 3.51 6.02 -52.49 -0.32 3.19 16 33 H 0.12 1.93 8.06 -52.49 -0.42 1.51 16 34 H 0.12 1.73 8.06 -52.49 -0.42 1.31 16 35 H 0.07 1.14 7.91 -51.93 -0.41 0.73 16 36 H 0.07 0.98 6.86 -51.93 -0.36 0.62 16 37 H 0.07 1.02 6.39 -51.93 -0.33 0.69 16 LS Contribution 303.62 15.07 4.58 4.58 Total: -1.00 -27.93 303.62 -8.61 -36.54 By element: Atomic # 1 Polarization: 7.32 SS G_CDS: -5.55 Total: 1.77 kcal Atomic # 6 Polarization: -15.72 SS G_CDS: -1.96 Total: -17.68 kcal Atomic # 7 Polarization: -38.83 SS G_CDS: 0.51 Total: -38.32 kcal Atomic # 14 Polarization: 20.42 SS G_CDS: -4.01 Total: 16.41 kcal Atomic # 35 Polarization: -1.13 SS G_CDS: -2.17 Total: -3.29 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -27.93 -8.61 -36.54 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000090549772.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 110.871 kcal (2) G-P(sol) polarization free energy of solvation -27.926 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 82.945 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.610 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.536 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.336 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds