Wall clock time and date at job start Tue Mar 31 2020 09:45:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31514 * 1 3 3 Si 1.86802 * 120.00291 * 2 1 4 4 H 1.48493 * 109.47103 * 240.00044 * 3 2 1 5 5 H 1.48495 * 109.46751 * 0.02562 * 3 2 1 6 6 H 1.48502 * 109.46948 * 119.99849 * 3 2 1 7 7 C 1.37881 * 120.00115 * 180.02562 * 2 1 3 8 8 H 1.07998 * 120.00428 * 180.02562 * 7 2 1 9 9 C 1.50706 * 119.99842 * 0.27206 * 7 2 1 10 10 O 1.42898 * 110.64315 * 300.43393 * 9 7 2 11 11 C 1.55148 * 110.72137 * 177.28304 * 9 7 2 12 12 C 1.54914 * 101.58281 * 206.13878 * 11 9 7 13 13 N 1.47416 * 104.83208 * 37.01034 * 12 11 9 14 14 C 1.34782 * 125.64931 * 155.90780 * 13 12 11 15 15 O 1.21586 * 119.99562 * 176.28565 * 14 13 12 16 16 C 1.47594 * 120.00109 * 356.29248 * 14 13 12 17 17 C 1.39741 * 120.08664 * 207.13157 * 16 14 13 18 18 C 1.37708 * 119.93026 * 179.69216 * 17 16 14 19 19 C 1.38966 * 120.10482 * 0.58104 * 18 17 16 20 20 O 1.35742 * 119.91607 * 179.69689 * 19 18 17 21 21 C 1.39077 * 120.16945 * 359.71713 * 19 18 17 22 22 Cl 1.73603 * 119.96561 * 180.02562 * 21 19 18 23 23 C 1.37809 * 120.06810 * 359.97438 * 21 19 18 24 24 C 1.47325 * 108.73766 * 335.71496 * 13 12 11 25 25 H 0.96995 * 119.99875 * 359.97438 * 1 2 3 26 26 H 0.96695 * 114.00588 * 59.29329 * 10 9 7 27 27 H 1.09002 * 111.00714 * 324.21104 * 11 9 7 28 28 H 1.09004 * 111.00328 * 88.02746 * 11 9 7 29 29 H 1.08995 * 110.36626 * 155.85018 * 12 11 9 30 30 H 1.08998 * 110.36801 * 278.16969 * 12 11 9 31 31 H 1.07997 * 120.03222 * 359.97438 * 17 16 14 32 32 H 1.08004 * 119.94735 * 180.31845 * 18 17 16 33 33 H 0.96702 * 113.99486 * 270.02241 * 20 19 18 34 34 H 1.08000 * 120.05566 * 180.02562 * 23 21 19 35 35 H 1.08997 * 110.06417 * 241.86891 * 24 13 12 36 36 H 1.09002 * 109.84486 * 120.61346 * 24 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3151 0.0000 0.0000 3 14 2.2492 1.6177 0.0000 4 1 3.1029 1.6963 -1.2125 5 1 1.2843 2.7464 0.0006 6 1 3.1030 1.6963 1.2125 7 6 2.0046 -1.1941 -0.0005 8 1 3.0845 -1.1941 -0.0001 9 6 1.2510 -2.4992 -0.0073 10 8 0.4078 -2.6001 1.1419 11 6 2.2321 -3.6992 -0.0755 12 6 1.3499 -4.7848 -0.7409 13 7 0.5316 -4.0546 -1.7259 14 6 -0.0315 -4.5872 -2.8286 15 8 -0.7445 -3.9037 -3.5376 16 6 0.2174 -6.0001 -3.1753 17 6 0.1512 -6.4166 -4.5076 18 6 0.3902 -7.7344 -4.8281 19 6 0.6851 -8.6527 -3.8277 20 8 0.9140 -9.9519 -4.1474 21 6 0.7460 -8.2440 -2.4997 22 17 1.1156 -9.3955 -1.2542 23 6 0.5143 -6.9258 -2.1716 24 6 0.4269 -2.6470 -1.3037 25 1 -0.4850 0.8400 0.0004 26 1 -0.2491 -1.8939 1.2110 27 1 3.0960 -3.4628 -0.6968 28 1 2.5439 -4.0061 0.9229 29 1 1.9732 -5.5263 -1.2406 30 1 0.7119 -5.2632 0.0022 31 1 -0.0827 -5.7049 -5.2854 32 1 0.3441 -8.0555 -5.8583 33 1 0.1193 -10.5029 -4.1468 34 1 0.5621 -6.6086 -1.1403 35 1 -0.6150 -2.3907 -1.1120 36 1 0.8343 -1.9971 -2.0782 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000592836795.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 09:45:55 Heat of formation + Delta-G solvation = -95.055039 kcal Electronic energy + Delta-G solvation = -23467.517601 eV Core-core repulsion = 19750.144477 eV Total energy + Delta-G solvation = -3717.373124 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 311.076 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -40.46447 -39.17728 -37.44064 -36.80907 -36.39716 -34.47163 -32.24557 -31.31567 -30.55673 -29.75153 -27.85658 -25.41964 -24.00456 -22.90608 -22.24141 -19.89186 -19.44685 -18.75970 -17.37169 -17.11122 -16.37618 -15.89418 -15.54254 -15.25789 -14.95435 -14.59565 -14.36881 -14.03422 -13.51731 -13.16748 -13.07311 -12.95005 -12.77291 -12.40412 -12.14050 -11.67315 -11.62516 -11.42922 -11.34573 -11.07836 -10.91774 -10.77134 -10.66874 -10.55291 -10.23370 -9.61316 -9.39481 -9.14163 -8.83932 -8.71137 -8.38155 -8.02091 -6.33156 -4.42009 0.54987 0.91710 1.88009 2.80024 3.19982 3.26083 3.27729 3.40708 3.59420 3.80402 4.23663 4.47831 4.65122 4.93486 4.94531 5.02976 5.20975 5.27198 5.47918 5.60776 5.68497 5.74333 5.88545 5.91451 5.99391 6.18134 6.31391 6.41565 6.68652 6.76523 6.83804 7.18728 7.22427 7.30212 7.68704 7.94094 8.05200 8.52494 8.61959 9.25519 9.35084 10.74679 Molecular weight = 311.08amu Principal moments of inertia in cm(-1) A = 0.025040 B = 0.003585 C = 0.003312 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1117.943275 B = 7809.164787 C = 8452.601381 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.895 5.895 2 C 0.071 3.929 3 Si 0.904 3.096 4 H -0.275 1.275 5 H -0.285 1.285 6 H -0.274 1.274 7 C -0.540 4.540 8 H 0.067 0.933 9 C 0.248 3.752 10 O -0.585 6.585 11 C -0.118 4.118 12 C 0.091 3.909 13 N -0.601 5.601 14 C 0.561 3.439 15 O -0.543 6.543 16 C -0.114 4.114 17 C -0.045 4.045 18 C -0.141 4.141 19 C 0.131 3.869 20 O -0.487 6.487 21 C -0.071 4.071 22 Cl -0.055 7.055 23 C -0.078 4.078 24 C 0.103 3.897 25 H 0.272 0.728 26 H 0.385 0.615 27 H 0.078 0.922 28 H 0.079 0.921 29 H 0.070 0.930 30 H 0.071 0.929 31 H 0.145 0.855 32 H 0.144 0.856 33 H 0.394 0.606 34 H 0.157 0.843 35 H 0.069 0.931 36 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.474 -16.792 -5.603 17.708 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.534 5.534 2 C -0.132 4.132 3 Si 0.732 3.268 4 H -0.200 1.200 5 H -0.210 1.210 6 H -0.200 1.200 7 C -0.578 4.578 8 H 0.085 0.915 9 C 0.208 3.792 10 O -0.394 6.394 11 C -0.156 4.156 12 C -0.032 4.032 13 N -0.333 5.333 14 C 0.349 3.651 15 O -0.423 6.423 16 C -0.118 4.118 17 C -0.064 4.064 18 C -0.160 4.160 19 C 0.085 3.915 20 O -0.298 6.298 21 C -0.098 4.098 22 Cl -0.026 7.026 23 C -0.097 4.097 24 C -0.018 4.018 25 H 0.082 0.918 26 H 0.236 0.764 27 H 0.097 0.903 28 H 0.098 0.902 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.163 0.837 32 H 0.161 0.839 33 H 0.251 0.749 34 H 0.174 0.826 35 H 0.087 0.913 36 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 0.878 -16.762 -5.850 17.775 hybrid contribution -0.377 1.087 0.009 1.151 sum 0.501 -15.674 -5.841 16.735 Atomic orbital electron populations 1.69627 1.06017 1.28160 1.49587 1.25072 0.95055 0.99800 0.93279 0.86443 0.79542 0.82000 0.78848 1.20000 1.21046 1.19951 1.21477 0.93706 0.90063 1.52538 0.91494 1.19490 0.86166 0.92151 0.81414 1.86089 1.51711 1.54870 1.46767 1.22791 0.97587 0.94844 1.00395 1.22712 0.93588 0.95867 0.91023 1.48804 1.49392 1.13037 1.22079 1.17693 0.80693 0.85981 0.80747 1.90780 1.38293 1.62069 1.51124 1.20088 1.03480 0.94202 0.94003 1.21243 0.94158 0.95435 0.95597 1.21321 1.02036 0.92966 0.99684 1.18373 0.97996 0.85417 0.89725 1.84788 1.36814 1.16915 1.91235 1.21258 1.07494 0.91781 0.89305 1.98377 1.92955 1.59269 1.52024 1.21826 0.95832 0.90363 1.01667 1.23170 1.02011 0.77406 0.99220 0.91833 0.76422 0.90301 0.90238 0.91212 0.91137 0.83750 0.83868 0.74892 0.82554 0.91270 0.91226 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.90 -23.34 10.96 55.43 0.61 -22.73 16 2 C 0.07 1.82 5.27 -17.82 -0.09 1.73 16 3 Si 0.90 20.10 29.54 -169.99 -5.02 15.08 16 4 H -0.27 -6.09 7.11 56.52 0.40 -5.69 16 5 H -0.29 -6.32 7.11 56.52 0.40 -5.92 16 6 H -0.27 -6.06 7.11 56.52 0.40 -5.66 16 7 C -0.54 -13.76 8.11 -34.44 -0.28 -14.04 16 8 H 0.07 1.67 7.77 -52.49 -0.41 1.27 16 9 C 0.25 5.81 0.85 -89.94 -0.08 5.73 16 10 O -0.58 -14.27 13.08 -35.23 -0.46 -14.73 16 11 C -0.12 -2.26 6.23 -24.58 -0.15 -2.42 16 12 C 0.09 1.53 5.01 -2.53 -0.01 1.52 16 13 N -0.60 -11.97 3.33 -171.48 -0.57 -12.54 16 14 C 0.56 10.85 7.63 -12.44 -0.09 10.76 16 15 O -0.54 -12.27 16.98 5.29 0.09 -12.18 16 16 C -0.11 -1.72 5.70 -104.96 -0.60 -2.32 16 17 C -0.05 -0.57 9.58 -39.21 -0.38 -0.95 16 18 C -0.14 -1.45 9.97 -39.51 -0.39 -1.85 16 19 C 0.13 1.40 6.70 -39.00 -0.26 1.14 16 20 O -0.49 -4.31 12.94 -18.93 -0.24 -4.56 16 21 C -0.07 -0.84 6.32 -39.43 -0.25 -1.09 16 22 Cl -0.06 -0.61 28.49 -51.86 -1.48 -2.08 16 23 C -0.08 -1.04 7.70 -39.18 -0.30 -1.34 16 24 C 0.10 2.41 5.39 -2.90 -0.02 2.40 16 25 H 0.27 6.83 8.31 -40.82 -0.34 6.49 16 26 H 0.38 9.68 7.24 45.56 0.33 10.01 16 27 H 0.08 1.46 8.03 -51.93 -0.42 1.04 16 28 H 0.08 1.44 8.14 -51.93 -0.42 1.01 16 29 H 0.07 1.00 6.17 -51.93 -0.32 0.68 16 30 H 0.07 1.13 7.28 -51.93 -0.38 0.76 16 31 H 0.14 1.76 7.87 -52.49 -0.41 1.35 16 32 H 0.14 1.09 8.06 -52.48 -0.42 0.67 16 33 H 0.39 1.67 9.06 45.56 0.41 2.09 16 34 H 0.16 2.05 4.57 -52.49 -0.24 1.81 16 35 H 0.07 1.77 8.00 -51.93 -0.42 1.36 16 36 H 0.07 1.77 7.81 -51.93 -0.41 1.37 16 LS Contribution 319.43 15.07 4.81 4.81 Total: -1.00 -29.61 319.43 -7.41 -37.01 By element: Atomic # 1 Polarization: 14.87 SS G_CDS: -2.23 Total: 12.64 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -2.91 Total: -0.73 kcal Atomic # 7 Polarization: -35.31 SS G_CDS: 0.04 Total: -35.27 kcal Atomic # 8 Polarization: -30.85 SS G_CDS: -0.62 Total: -31.46 kcal Atomic # 14 Polarization: 20.10 SS G_CDS: -5.02 Total: 15.08 kcal Atomic # 17 Polarization: -0.61 SS G_CDS: -1.48 Total: -2.08 kcal Total LS contribution 4.81 Total: 4.81 kcal Total: -29.61 -7.41 -37.01 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000592836795.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.043 kcal (2) G-P(sol) polarization free energy of solvation -29.607 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.649 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.406 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.012 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.055 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds