Wall clock time and date at job start Tue Mar 31 2020 10:11:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 H 1.08995 * 109.47251 * 2 1 4 4 C 1.50698 * 109.46795 * 119.99753 * 2 1 3 5 5 O 1.21293 * 119.99705 * 106.43914 * 4 2 1 6 6 N 1.34770 * 120.00519 * 286.43822 * 4 2 1 7 7 C 1.37098 * 119.99910 * 3.85307 * 6 4 2 8 8 H 1.08004 * 119.99650 * 24.09112 * 7 6 4 9 9 C 1.38955 * 120.00532 * 204.09229 * 7 6 4 10 10 N 1.31408 * 119.99559 * 10.73941 * 9 7 6 11 11 Si 1.86794 * 120.00155 * 190.74516 * 9 7 6 12 12 H 1.48504 * 109.47224 * 359.97438 * 11 9 7 13 13 H 1.48503 * 109.47494 * 120.00133 * 11 9 7 14 14 H 1.48501 * 109.47088 * 239.99638 * 11 9 7 15 15 C 1.46501 * 120.00398 * 183.85512 * 6 4 2 16 16 C 1.50704 * 109.47354 * 82.67569 * 15 6 4 17 17 O 1.20827 * 119.99597 * 0.02562 * 16 15 6 18 18 O 1.34218 * 120.00203 * 180.02562 * 16 15 6 19 19 C 1.50695 * 109.47301 * 239.99728 * 2 1 3 20 20 C 1.38258 * 119.99309 * 119.99792 * 19 2 1 21 21 C 1.38225 * 120.03040 * 179.97438 * 20 19 2 22 22 C 1.38236 * 120.00915 * 0.02562 * 21 20 19 23 23 C 1.38337 * 119.98783 * 0.02562 * 22 21 20 24 24 Cl 1.73602 * 120.01232 * 180.02562 * 23 22 21 25 25 C 1.38195 * 119.99324 * 299.72981 * 19 2 1 26 26 H 1.08996 * 109.47211 * 173.67187 * 1 2 3 27 27 H 1.09003 * 109.47103 * 293.67568 * 1 2 3 28 28 H 1.09004 * 109.46826 * 53.66750 * 1 2 3 29 29 H 0.97000 * 119.99755 * 179.97438 * 10 9 7 30 30 H 1.09004 * 109.47105 * 202.67618 * 15 6 4 31 31 H 1.09001 * 109.47043 * 322.67729 * 15 6 4 32 32 H 0.96703 * 117.00073 * 179.97438 * 18 16 15 33 33 H 1.08003 * 119.98579 * 359.97438 * 20 19 2 34 34 H 1.08001 * 119.99682 * 180.02562 * 21 20 19 35 35 H 1.07997 * 120.00541 * 180.02562 * 22 21 20 36 36 H 1.07995 * 120.00544 * 0.02562 * 25 19 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0323 -0.7104 1.2305 5 8 2.5147 -1.8192 1.1361 6 7 1.9455 -0.1136 2.4358 7 6 1.3293 1.1053 2.5544 8 1 0.5948 1.4123 1.8245 9 6 1.6496 1.9457 3.6136 10 7 2.6834 1.6744 4.3781 11 14 0.6106 3.4609 3.9509 12 1 -0.4867 3.5408 2.9535 13 1 0.0336 3.3717 5.3163 14 1 1.4593 4.6754 3.8507 15 6 2.5097 -0.7674 3.6192 16 6 3.9884 -0.4858 3.6918 17 8 4.5167 0.1919 2.8423 18 8 4.7185 -0.9878 4.6999 19 6 2.0324 -0.7104 -1.2304 20 6 2.8272 -0.0384 -2.1404 21 6 3.2889 -0.6894 -3.2689 22 6 2.9556 -2.0129 -3.4886 23 6 2.1595 -2.6856 -2.5789 24 17 1.7410 -4.3478 -2.8538 25 6 1.7031 -2.0351 -1.4461 26 1 -0.3633 -1.0214 -0.1133 27 1 -0.3633 0.4127 0.9412 28 1 -0.3633 0.6089 -0.8279 29 1 2.9073 2.2612 5.1173 30 1 2.0220 -0.3817 4.5146 31 1 2.3476 -1.8432 3.5520 32 1 5.6630 -0.7803 4.7037 33 1 3.0875 0.9957 -1.9694 34 1 3.9101 -0.1641 -3.9792 35 1 3.3166 -2.5217 -4.3701 36 1 1.0855 -2.5611 -0.7332 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000736201673.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:11:38 Heat of formation + Delta-G solvation = -100.715682 kcal Electronic energy + Delta-G solvation = -23977.329299 eV Core-core repulsion = 20259.710710 eV Total energy + Delta-G solvation = -3717.618588 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 311.076 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -39.83322 -38.98975 -37.94749 -36.24560 -35.19524 -34.54120 -33.53013 -31.62346 -30.43172 -29.38414 -27.58294 -25.14178 -23.88972 -22.35014 -21.75273 -20.39565 -19.13118 -17.42421 -16.92175 -16.52725 -16.19837 -15.54449 -15.21492 -15.01119 -14.42033 -14.32261 -14.23997 -13.72587 -13.40384 -13.25700 -13.11017 -12.77278 -12.23066 -11.97328 -11.78214 -11.48007 -11.43717 -11.35023 -11.25291 -11.04755 -10.98399 -10.61713 -10.56341 -10.43306 -10.25661 -10.20639 -9.60509 -9.10881 -8.66284 -8.53471 -8.30066 -7.96027 -6.55015 -4.13557 1.45213 1.60059 2.36642 3.02608 3.13238 3.16468 3.56959 3.70712 3.91733 3.99959 4.27470 4.66333 4.97390 4.99920 5.09214 5.31268 5.53448 5.62408 5.72360 5.79212 5.88661 6.02095 6.21555 6.28002 6.37953 6.40359 6.51233 6.55512 6.58796 6.61181 6.69444 6.96180 7.09667 7.31067 7.55315 7.64212 8.17893 8.91945 9.18537 9.31067 9.70779 10.52516 Molecular weight = 311.08amu Principal moments of inertia in cm(-1) A = 0.016816 B = 0.004599 C = 0.004098 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1664.696864 B = 6086.662555 C = 6830.311943 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.057 4.057 3 H 0.103 0.897 4 C 0.481 3.519 5 O -0.593 6.593 6 N -0.429 5.429 7 C -0.339 4.339 8 H 0.110 0.890 9 C 0.038 3.962 10 N -0.875 5.875 11 Si 0.928 3.072 12 H -0.267 1.267 13 H -0.279 1.279 14 H -0.281 1.281 15 C 0.159 3.841 16 C 0.500 3.500 17 O -0.511 6.511 18 O -0.536 6.536 19 C -0.041 4.041 20 C -0.110 4.110 21 C -0.116 4.116 22 C -0.121 4.121 23 C -0.039 4.039 24 Cl -0.085 7.085 25 C -0.066 4.066 26 H 0.054 0.946 27 H 0.082 0.918 28 H 0.056 0.944 29 H 0.272 0.728 30 H 0.123 0.877 31 H 0.079 0.921 32 H 0.390 0.610 33 H 0.127 0.873 34 H 0.127 0.873 35 H 0.126 0.874 36 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.477 -2.781 -7.838 8.678 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.078 4.078 3 H 0.121 0.879 4 C 0.270 3.730 5 O -0.478 6.478 6 N -0.148 5.148 7 C -0.466 4.466 8 H 0.128 0.872 9 C -0.167 4.167 10 N -0.514 5.514 11 Si 0.755 3.245 12 H -0.191 1.191 13 H -0.205 1.205 14 H -0.207 1.207 15 C 0.034 3.966 16 C 0.341 3.659 17 O -0.397 6.397 18 O -0.347 6.347 19 C -0.041 4.041 20 C -0.128 4.128 21 C -0.134 4.134 22 C -0.140 4.140 23 C -0.066 4.066 24 Cl -0.056 7.056 25 C -0.085 4.085 26 H 0.073 0.927 27 H 0.101 0.899 28 H 0.075 0.925 29 H 0.083 0.917 30 H 0.141 0.859 31 H 0.097 0.903 32 H 0.246 0.754 33 H 0.145 0.855 34 H 0.145 0.855 35 H 0.144 0.856 36 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -2.480 -3.279 -7.959 8.958 hybrid contribution 0.452 1.055 0.406 1.217 sum -2.027 -2.225 -7.553 8.131 Atomic orbital electron populations 1.21889 0.92865 1.02005 1.03324 1.20026 0.97072 1.00396 0.90312 0.87864 1.19978 0.81908 0.86966 0.84168 1.90565 1.50131 1.21205 1.85865 1.43261 1.49140 1.18572 1.03838 1.19904 1.20381 0.93207 1.13081 0.87227 1.25345 0.95525 0.98911 0.96895 1.69699 1.24224 1.38879 1.18568 0.85837 0.79409 0.80682 0.78594 1.19093 1.20488 1.20705 1.20361 0.86977 0.96815 0.92477 1.23669 0.90313 0.74918 0.77011 1.90549 1.72651 1.35909 1.40581 1.84520 1.25548 1.73024 1.51595 1.19567 0.96281 0.93357 0.94945 1.21185 0.97074 1.00437 0.94074 1.20958 1.00474 0.94018 0.97980 1.20909 0.98922 0.94951 0.99231 1.20860 1.02391 0.85559 0.97771 1.98335 1.92636 1.18388 1.96241 1.20881 0.99230 0.93996 0.94395 0.92737 0.89894 0.92458 0.91688 0.85889 0.90321 0.75435 0.85545 0.85539 0.85644 0.84881 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.31 8.74 37.16 0.32 -1.99 16 2 C -0.06 -1.09 2.09 -92.93 -0.19 -1.28 16 3 H 0.10 2.00 7.41 -51.93 -0.38 1.61 16 4 C 0.48 11.15 6.56 -10.99 -0.07 11.08 16 5 O -0.59 -14.99 14.35 5.55 0.08 -14.91 16 6 N -0.43 -10.27 2.19 -116.09 -0.25 -10.52 16 7 C -0.34 -7.93 8.39 -14.93 -0.13 -8.06 16 8 H 0.11 2.36 4.79 -52.48 -0.25 2.10 16 9 C 0.04 0.90 5.08 -17.47 -0.09 0.81 16 10 N -0.88 -21.94 8.94 55.50 0.50 -21.44 16 11 Si 0.93 18.46 29.57 -169.99 -5.03 13.43 16 12 H -0.27 -5.07 7.11 56.52 0.40 -4.67 16 13 H -0.28 -5.55 7.11 56.52 0.40 -5.15 16 14 H -0.28 -5.78 7.11 56.52 0.40 -5.38 16 15 C 0.16 3.72 5.14 -5.19 -0.03 3.69 16 16 C 0.50 12.08 6.43 36.01 0.23 12.31 16 17 O -0.51 -14.02 16.63 -18.75 -0.31 -14.33 16 18 O -0.54 -10.77 13.42 -39.23 -0.53 -11.30 16 19 C -0.04 -0.73 4.54 -104.63 -0.47 -1.20 16 20 C -0.11 -1.73 9.67 -39.58 -0.38 -2.11 16 21 C -0.12 -1.60 10.05 -39.59 -0.40 -1.99 16 22 C -0.12 -1.71 9.83 -39.55 -0.39 -2.10 16 23 C -0.04 -0.63 6.32 -39.49 -0.25 -0.88 16 24 Cl -0.08 -1.22 28.96 -51.86 -1.50 -2.72 16 25 C -0.07 -1.17 7.55 -39.55 -0.30 -1.47 16 26 H 0.05 0.85 7.20 -51.93 -0.37 0.47 16 27 H 0.08 1.39 5.62 -51.93 -0.29 1.10 16 28 H 0.06 0.79 8.14 -51.93 -0.42 0.36 16 29 H 0.27 6.57 8.31 -40.82 -0.34 6.23 16 30 H 0.12 2.86 6.50 -51.93 -0.34 2.52 16 31 H 0.08 1.74 7.60 -51.93 -0.39 1.34 16 32 H 0.39 6.12 9.10 45.56 0.41 6.54 16 33 H 0.13 1.80 7.95 -52.48 -0.42 1.39 16 34 H 0.13 1.35 8.06 -52.49 -0.42 0.93 16 35 H 0.13 1.45 8.06 -52.49 -0.42 1.03 16 36 H 0.13 2.46 7.15 -52.49 -0.38 2.08 16 LS Contribution 321.63 15.07 4.85 4.85 Total: -1.00 -30.45 321.63 -7.15 -37.61 By element: Atomic # 1 Polarization: 15.33 SS G_CDS: -2.81 Total: 12.52 kcal Atomic # 6 Polarization: 8.96 SS G_CDS: -2.14 Total: 6.82 kcal Atomic # 7 Polarization: -32.20 SS G_CDS: 0.24 Total: -31.96 kcal Atomic # 8 Polarization: -39.78 SS G_CDS: -0.76 Total: -40.54 kcal Atomic # 14 Polarization: 18.46 SS G_CDS: -5.03 Total: 13.43 kcal Atomic # 17 Polarization: -1.22 SS G_CDS: -1.50 Total: -2.72 kcal Total LS contribution 4.85 Total: 4.85 kcal Total: -30.45 -7.15 -37.61 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000736201673.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.109 kcal (2) G-P(sol) polarization free energy of solvation -30.453 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.562 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.607 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.716 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds