Wall clock time and date at job start Tue Mar 31 2020 09:47:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31289 * 1 3 3 Si 1.86799 * 120.00126 * 2 1 4 4 H 1.48500 * 109.47185 * 274.97627 * 3 2 1 5 5 H 1.48493 * 109.47464 * 34.98020 * 3 2 1 6 6 H 1.48507 * 109.47150 * 154.97908 * 3 2 1 7 7 C 1.38987 * 119.99778 * 179.97438 * 2 1 3 8 8 H 1.08003 * 120.00370 * 185.93521 * 7 2 1 9 9 N 1.37320 * 120.00252 * 5.94309 * 7 2 1 10 10 C 1.36488 * 126.06917 * 174.12850 * 9 7 2 11 11 C 1.35702 * 107.50653 * 179.97438 * 10 9 7 12 12 N 1.40533 * 126.08671 * 179.97438 * 11 10 9 13 13 C 1.34777 * 120.00236 * 179.97438 * 12 11 10 14 14 O 1.21612 * 119.99848 * 0.02562 * 13 12 11 15 15 C 1.47528 * 120.00270 * 180.02562 * 13 12 11 16 16 C 1.39930 * 120.17793 * 89.73056 * 15 13 12 17 17 F 1.35103 * 120.07470 * 359.97438 * 16 15 13 18 18 C 1.38173 * 119.85205 * 179.76943 * 16 15 13 19 19 C 1.38335 * 120.21277 * 0.48206 * 18 16 15 20 20 C 1.38448 * 120.35841 * 359.76680 * 19 18 16 21 21 F 1.35100 * 119.92561 * 179.97438 * 20 19 18 22 22 C 1.38438 * 120.14517 * 0.02562 * 20 19 18 23 23 F 1.35105 * 120.10617 * 179.97438 * 22 20 19 24 24 C 1.40661 * 107.82836 * 359.97438 * 11 10 9 25 25 N 1.30907 * 108.39087 * 0.02562 * 24 11 10 26 26 H 0.97003 * 119.99737 * 0.02562 * 1 2 3 27 27 H 1.08001 * 126.25317 * 0.25313 * 10 9 7 28 28 H 0.97006 * 120.00048 * 0.02562 * 12 11 10 29 29 H 1.08006 * 119.89192 * 180.21071 * 18 16 15 30 30 H 1.08000 * 119.82357 * 179.75299 * 19 18 16 31 31 H 1.08002 * 125.80843 * 180.02562 * 24 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3129 0.0000 0.0000 3 14 2.2469 1.6177 0.0000 4 1 2.3893 2.1071 -1.3948 5 1 1.5011 2.6200 0.8026 6 1 3.5932 1.4120 0.5922 7 6 2.0078 -1.2037 0.0005 8 1 3.0835 -1.2063 0.0973 9 7 1.3267 -2.3898 -0.1221 10 6 1.8862 -3.6283 -0.2490 11 6 0.8730 -4.5263 -0.3417 12 7 1.0106 -5.9175 -0.4850 13 6 -0.0850 -6.6984 -0.5651 14 8 -1.1927 -6.1989 -0.5138 15 6 0.0594 -8.1589 -0.7149 16 6 0.1339 -8.9782 0.4170 17 9 0.0744 -8.4337 1.6520 18 6 0.2643 -10.3457 0.2688 19 6 0.3313 -10.9058 -0.9944 20 6 0.2636 -10.1029 -2.1203 21 9 0.3305 -10.6591 -3.3497 22 6 0.1287 -8.7314 -1.9890 23 9 0.0632 -7.9486 -3.0883 24 6 -0.3394 -3.8168 -0.2687 25 7 -0.0655 -2.5434 -0.1381 26 1 -0.4850 0.8401 -0.0004 27 1 2.9423 -3.8531 -0.2674 28 1 1.8941 -6.3159 -0.5255 29 1 0.3185 -10.9790 1.1420 30 1 0.4373 -11.9751 -1.1029 31 1 -1.3281 -4.2491 -0.3130 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000771997246.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 09:47:37 Heat of formation + Delta-G solvation = -49.124344 kcal Electronic energy + Delta-G solvation = -24437.309392 eV Core-core repulsion = 20078.963738 eV Total energy + Delta-G solvation = -4358.345654 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 311.062 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -49.81996 -49.31793 -48.88427 -40.14566 -39.22566 -38.07693 -34.33595 -33.24453 -31.74247 -30.43074 -30.23112 -27.84946 -25.36626 -24.31360 -23.26945 -21.39183 -20.72224 -19.53896 -18.67277 -18.22498 -18.16410 -17.46354 -16.78692 -16.62137 -16.08676 -15.81637 -15.48206 -15.33455 -15.17249 -14.86282 -14.80639 -14.30410 -14.29448 -13.69363 -13.46144 -13.16588 -12.96173 -12.51019 -12.16889 -12.13131 -11.71175 -11.49276 -11.29450 -10.97917 -10.54290 -10.27310 -9.75862 -9.38232 -9.21829 -9.04778 -8.85817 -8.10203 -6.78137 -6.59050 -4.26530 0.21919 0.33296 2.47552 2.63174 2.97063 3.02786 3.08650 3.10034 3.38160 3.56283 3.65571 3.82357 3.97129 4.08565 4.28034 4.42950 4.49719 4.85914 4.98606 5.10349 5.18736 5.29794 5.34490 5.51250 6.16080 6.20010 6.38413 6.79346 6.90746 6.98561 7.18136 7.81467 8.01549 8.19888 8.48430 8.70680 9.33603 9.61966 10.37141 Molecular weight = 311.06amu Principal moments of inertia in cm(-1) A = 0.029872 B = 0.003074 C = 0.002957 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 937.121950 B = 9105.885791 C = 9466.048467 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.767 5.767 2 C 0.047 3.953 3 Si 0.936 3.064 4 H -0.271 1.271 5 H -0.276 1.276 6 H -0.263 1.263 7 C -0.324 4.324 8 H 0.118 0.882 9 N -0.140 5.140 10 C -0.078 4.078 11 C -0.066 4.066 12 N -0.603 5.603 13 C 0.544 3.456 14 O -0.511 6.511 15 C -0.159 4.159 16 C 0.156 3.844 17 F -0.113 7.113 18 C -0.137 4.137 19 C -0.084 4.084 20 C 0.056 3.944 21 F -0.121 7.121 22 C 0.132 3.868 23 F -0.107 7.107 24 C -0.028 4.028 25 N -0.260 5.260 26 H 0.276 0.724 27 H 0.148 0.852 28 H 0.399 0.601 29 H 0.160 0.840 30 H 0.161 0.839 31 H 0.176 0.824 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.365 -20.195 -0.731 20.674 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.394 5.394 2 C -0.171 4.171 3 Si 0.759 3.241 4 H -0.196 1.196 5 H -0.201 1.201 6 H -0.187 1.187 7 C -0.456 4.456 8 H 0.135 0.865 9 N 0.093 4.907 10 C -0.229 4.229 11 C -0.172 4.172 12 N -0.244 5.244 13 C 0.327 3.673 14 O -0.386 6.386 15 C -0.164 4.164 16 C 0.136 3.864 17 F -0.091 7.091 18 C -0.156 4.156 19 C -0.103 4.103 20 C 0.035 3.965 21 F -0.100 7.100 22 C 0.111 3.889 23 F -0.085 7.085 24 C -0.204 4.204 25 N -0.091 5.091 26 H 0.086 0.914 27 H 0.165 0.835 28 H 0.233 0.767 29 H 0.177 0.823 30 H 0.178 0.822 31 H 0.193 0.807 Dipole moment (debyes) X Y Z Total from point charges 2.878 -18.427 -0.606 18.661 hybrid contribution 1.236 -0.278 -0.367 1.319 sum 4.114 -18.706 -0.973 19.177 Atomic orbital electron populations 1.70221 1.06192 1.28095 1.34863 1.25660 0.95701 1.00334 0.95389 0.85795 0.79443 0.79932 0.78886 1.19603 1.20070 1.18746 1.19909 0.92203 0.80639 1.52843 0.86489 1.44574 1.04029 1.03737 1.38365 1.21248 0.96813 0.85699 1.19184 1.17232 0.94587 0.81046 1.24285 1.42369 1.07749 1.05473 1.68833 1.17340 0.85391 0.84166 0.80362 1.90756 1.25180 1.73154 1.49560 1.20006 1.08431 0.96454 0.91534 1.17338 0.99127 0.90766 0.79212 1.91629 1.92874 1.86196 1.38359 1.21015 1.03087 0.92580 0.98893 1.20998 0.98468 1.01207 0.89630 1.17460 1.08029 0.89210 0.81777 1.91571 1.93919 1.84964 1.39516 1.17284 1.01953 0.87002 0.82682 1.91638 1.92950 1.73718 1.50152 1.24108 0.97902 0.90958 1.07411 1.78272 0.90264 1.14927 1.25613 0.91383 0.83499 0.76715 0.82259 0.82182 0.80737 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.77 -21.45 11.84 55.49 0.66 -20.80 16 2 C 0.05 1.21 5.50 -17.51 -0.10 1.11 16 3 Si 0.94 18.87 29.56 -169.99 -5.02 13.84 16 4 H -0.27 -5.41 7.11 56.52 0.40 -5.01 16 5 H -0.28 -5.51 7.11 56.52 0.40 -5.11 16 6 H -0.26 -5.05 7.11 56.52 0.40 -4.65 16 7 C -0.32 -8.55 10.24 -14.82 -0.15 -8.70 16 8 H 0.12 2.75 7.84 -52.48 -0.41 2.34 16 9 N -0.14 -3.85 3.74 -11.41 -0.04 -3.90 16 10 C -0.08 -1.85 11.49 -16.39 -0.19 -2.03 16 11 C -0.07 -1.55 6.90 -83.86 -0.58 -2.13 16 12 N -0.60 -11.19 5.46 -10.94 -0.06 -11.25 16 13 C 0.54 10.15 6.51 -12.47 -0.08 10.07 16 14 O -0.51 -11.56 14.25 5.27 0.08 -11.49 16 15 C -0.16 -2.20 5.64 -104.87 -0.59 -2.79 16 16 C 0.16 1.75 7.29 -38.97 -0.28 1.47 16 17 F -0.11 -1.48 16.83 2.25 0.04 -1.44 16 18 C -0.14 -0.97 10.01 -39.57 -0.40 -1.37 16 19 C -0.08 -0.55 10.01 -39.47 -0.39 -0.95 16 20 C 0.06 0.55 7.29 -39.43 -0.29 0.26 16 21 F -0.12 -1.27 17.18 2.25 0.04 -1.23 16 22 C 0.13 1.69 7.30 -38.90 -0.28 1.40 16 23 F -0.11 -1.61 16.74 2.25 0.04 -1.57 16 24 C -0.03 -0.76 10.85 -17.03 -0.18 -0.94 16 25 N -0.26 -7.62 10.42 30.80 0.32 -7.30 16 26 H 0.28 7.03 8.31 -40.82 -0.34 6.69 16 27 H 0.15 2.86 8.06 -52.49 -0.42 2.44 16 28 H 0.40 5.78 8.81 -40.82 -0.36 5.42 16 29 H 0.16 0.63 8.06 -52.48 -0.42 0.21 16 30 H 0.16 0.51 8.06 -52.49 -0.42 0.08 16 31 H 0.18 4.65 5.91 -52.49 -0.31 4.34 16 LS Contribution 301.39 15.07 4.54 4.54 Total: -1.00 -34.01 301.39 -4.42 -38.43 By element: Atomic # 1 Polarization: 8.24 SS G_CDS: -1.48 Total: 6.75 kcal Atomic # 6 Polarization: -1.08 SS G_CDS: -3.52 Total: -4.60 kcal Atomic # 7 Polarization: -44.12 SS G_CDS: 0.88 Total: -43.24 kcal Atomic # 8 Polarization: -11.56 SS G_CDS: 0.08 Total: -11.49 kcal Atomic # 9 Polarization: -4.35 SS G_CDS: 0.11 Total: -4.24 kcal Atomic # 14 Polarization: 18.87 SS G_CDS: -5.02 Total: 13.84 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -34.01 -4.42 -38.43 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000771997246.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.698 kcal (2) G-P(sol) polarization free energy of solvation -34.006 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.704 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.420 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.426 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.124 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds