Wall clock time and date at job start Tue Mar 31 2020 09:56:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38092 * 119.78097 * 2 1 4 4 C 1.38633 * 120.12386 * 179.97438 * 3 2 1 5 5 O 1.35625 * 120.15496 * 179.97438 * 4 3 2 6 6 C 1.42894 * 116.99851 * 0.02562 * 5 4 3 7 7 C 1.50706 * 109.47263 * 179.97438 * 6 5 4 8 8 O 1.21283 * 119.99503 * 359.97438 * 7 6 5 9 9 N 1.34773 * 120.00081 * 179.72605 * 7 6 5 10 10 C 1.46506 * 119.99968 * 180.02562 * 9 7 6 11 11 C 1.50690 * 109.47072 * 179.97438 * 10 9 7 12 12 H 1.08002 * 120.00210 * 359.97438 * 11 10 9 13 13 C 1.37878 * 119.99820 * 179.97438 * 11 10 9 14 14 N 1.31512 * 120.00036 * 359.97438 * 13 11 10 15 15 Si 1.86808 * 120.00010 * 180.02562 * 13 11 10 16 16 H 1.48501 * 109.47177 * 59.99528 * 15 13 11 17 17 H 1.48496 * 109.46992 * 179.97438 * 15 13 11 18 18 H 1.48499 * 109.46935 * 299.99881 * 15 13 11 19 19 C 1.40461 * 119.69180 * 0.25918 * 4 3 2 20 20 C 1.46790 * 120.22224 * 179.74878 * 19 4 3 21 21 O 1.21296 * 120.00302 * 179.97438 * 20 19 4 22 22 C 1.39989 * 119.56284 * 359.51337 * 19 4 3 23 23 C 1.37816 * 119.86639 * 0.48713 * 22 19 4 24 24 Cl 1.73605 * 119.84580 * 179.72439 * 23 22 19 25 25 H 1.09002 * 109.47007 * 89.99625 * 1 2 3 26 26 H 1.08996 * 109.47072 * 210.00203 * 1 2 3 27 27 H 1.09000 * 109.46694 * 329.99764 * 1 2 3 28 28 H 1.07999 * 119.93588 * 0.02562 * 3 2 1 29 29 H 1.09001 * 109.47678 * 59.99831 * 6 5 4 30 30 H 1.08998 * 109.47532 * 299.99777 * 6 5 4 31 31 H 0.96998 * 120.00525 * 359.97438 * 9 7 6 32 32 H 1.09004 * 109.46587 * 299.99661 * 10 9 7 33 33 H 1.08998 * 109.47213 * 59.99069 * 10 9 7 34 34 H 0.97005 * 119.99861 * 179.97438 * 14 13 11 35 35 H 1.07997 * 119.99425 * 359.97438 * 20 19 4 36 36 H 1.07998 * 120.06542 * 180.23026 * 22 19 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1929 1.1985 0.0000 4 6 3.5792 1.2068 0.0005 5 8 4.2535 2.3836 0.0000 6 6 3.4713 3.5794 -0.0005 7 6 4.3853 4.7777 -0.0004 8 8 5.5882 4.6227 0.0005 9 7 3.8661 6.0213 -0.0064 10 6 4.7547 7.1861 -0.0069 11 6 3.9298 8.4472 -0.0148 12 1 2.8515 8.3871 -0.0194 13 6 4.5517 9.6777 -0.0161 14 7 5.8648 9.7509 -0.0099 15 14 3.5292 11.2411 -0.0251 16 1 2.6673 11.2758 1.1837 17 1 4.4299 12.4217 -0.0244 18 1 2.6774 11.2683 -1.2412 19 6 4.2823 -0.0091 -0.0044 20 6 5.7501 -0.0139 -0.0095 21 8 6.3532 -1.0663 -0.0133 22 6 3.5739 -1.2166 0.0005 23 6 2.1958 -1.2037 -0.0001 24 17 1.3178 -2.7014 -0.0012 25 1 -0.3633 0.0001 -1.0277 26 1 -0.3633 -0.8899 0.5138 27 1 -0.3633 0.8900 0.5139 28 1 1.6483 2.1312 0.0004 29 1 2.8423 3.6027 0.8894 30 1 2.8424 3.6019 -0.8905 31 1 2.9041 6.1453 -0.0112 32 1 5.3802 7.1662 0.8856 33 1 5.3871 7.1604 -0.8943 34 1 6.3023 10.6167 -0.0112 35 1 6.2931 0.9196 -0.0098 36 1 4.1062 -2.1562 0.0004 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000849982821.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 09:56:51 Heat of formation + Delta-G solvation = -97.499461 kcal Electronic energy + Delta-G solvation = -22033.342554 eV Core-core repulsion = 18315.863431 eV Total energy + Delta-G solvation = -3717.479123 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 311.076 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -40.94959 -39.31782 -38.56577 -37.90360 -36.47283 -34.37320 -33.30517 -32.49743 -30.59458 -29.22743 -28.22193 -26.70813 -23.94688 -23.14799 -22.26014 -21.26170 -20.02092 -18.22687 -17.83973 -17.06993 -16.68442 -16.56049 -15.70367 -15.32793 -15.06189 -14.83274 -14.69452 -14.64874 -14.40269 -14.09535 -13.99562 -13.53861 -12.94555 -12.83977 -12.75652 -12.31851 -12.23512 -12.07264 -11.86947 -11.70446 -11.21336 -11.09593 -10.97343 -10.89155 -10.41431 -9.91109 -9.53461 -9.39518 -9.31801 -8.85638 -8.54461 -8.09641 -6.25969 -4.34183 0.22639 0.80457 1.78169 2.13799 2.48125 3.01970 3.18933 3.24460 3.25651 3.26522 3.91111 3.99702 4.23063 4.29149 4.34783 4.47717 4.77672 4.94217 4.94750 5.04026 5.10455 5.11509 5.16452 5.22587 5.29867 5.43172 5.63560 5.72646 5.84138 6.06320 6.81407 7.13931 7.19907 7.28684 7.37295 7.51840 7.84636 8.38159 8.61517 8.84893 9.32466 10.83994 Molecular weight = 311.08amu Principal moments of inertia in cm(-1) A = 0.023166 B = 0.002496 C = 0.002258 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1208.351917 B =11217.286258 C =12399.856908 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 C 0.001 3.999 3 C -0.218 4.218 4 C 0.198 3.802 5 O -0.276 6.276 6 C 0.035 3.965 7 C 0.500 3.500 8 O -0.531 6.531 9 N -0.705 5.705 10 C 0.251 3.749 11 C -0.548 4.548 12 H 0.064 0.936 13 C 0.065 3.935 14 N -0.884 5.884 15 Si 0.905 3.095 16 H -0.275 1.275 17 H -0.285 1.285 18 H -0.275 1.275 19 C -0.219 4.219 20 C 0.393 3.607 21 O -0.468 6.468 22 C -0.008 4.008 23 C -0.095 4.095 24 Cl -0.066 7.066 25 H 0.084 0.916 26 H 0.079 0.921 27 H 0.077 0.923 28 H 0.147 0.853 29 H 0.095 0.905 30 H 0.095 0.905 31 H 0.392 0.608 32 H 0.030 0.970 33 H 0.030 0.970 34 H 0.268 0.732 35 H 0.121 0.879 36 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.827 -19.894 -0.003 23.670 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.000 4.000 3 C -0.237 4.237 4 C 0.149 3.851 5 O -0.186 6.186 6 C -0.043 4.043 7 C 0.282 3.718 8 O -0.408 6.408 9 N -0.355 5.355 10 C 0.131 3.869 11 C -0.586 4.586 12 H 0.082 0.918 13 C -0.139 4.139 14 N -0.520 5.520 15 Si 0.732 3.268 16 H -0.200 1.200 17 H -0.210 1.210 18 H -0.200 1.200 19 C -0.222 4.222 20 C 0.253 3.747 21 O -0.342 6.342 22 C -0.027 4.027 23 C -0.122 4.122 24 Cl -0.037 7.037 25 H 0.102 0.898 26 H 0.098 0.902 27 H 0.096 0.904 28 H 0.164 0.836 29 H 0.113 0.887 30 H 0.113 0.887 31 H 0.225 0.775 32 H 0.048 0.952 33 H 0.048 0.952 34 H 0.078 0.922 35 H 0.137 0.863 36 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -11.302 -20.473 -0.001 23.385 hybrid contribution -1.448 1.058 -0.010 1.793 sum -12.750 -19.415 -0.011 23.228 Atomic orbital electron populations 1.21019 0.89636 1.04131 1.03607 1.19777 0.96979 0.90628 0.92610 1.21125 0.92585 0.99015 1.11001 1.19321 0.90425 0.85590 0.89758 1.86121 1.34738 1.11429 1.86301 1.22827 0.94470 0.83119 1.03914 1.19775 0.88886 0.84069 0.79035 1.90732 1.14897 1.85777 1.49359 1.46365 1.11198 1.05639 1.72316 1.19189 0.89497 0.80073 0.98107 1.21141 0.93156 0.90366 1.53942 0.91838 1.24951 0.95063 0.99375 0.94540 1.69956 1.07983 1.25779 1.48330 0.86451 0.79781 0.81832 0.78712 1.20025 1.21007 1.20021 1.20227 0.97429 0.90220 1.14279 1.23918 0.87478 0.93941 0.69395 1.90510 1.71258 1.36710 1.35704 1.21144 0.91600 0.98300 0.91608 1.20514 0.92066 0.87153 1.12484 1.98356 1.76062 1.32003 1.97249 0.89774 0.90235 0.90418 0.83568 0.88737 0.88728 0.77477 0.95196 0.95196 0.92230 0.86297 0.83251 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.76 9.60 36.01 0.35 -0.41 16 2 C 0.00 0.01 5.89 -104.51 -0.62 -0.61 16 3 C -0.22 -1.91 8.67 -39.49 -0.34 -2.25 16 4 C 0.20 2.17 6.71 -38.60 -0.26 1.91 16 5 O -0.28 -3.58 8.85 -38.48 -0.34 -3.92 16 6 C 0.04 0.41 5.22 36.01 0.19 0.59 16 7 C 0.50 8.84 7.91 -10.98 -0.09 8.75 16 8 O -0.53 -11.97 16.50 -14.36 -0.24 -12.21 16 9 N -0.71 -13.11 5.55 -61.47 -0.34 -13.45 16 10 C 0.25 6.22 5.43 -5.20 -0.03 6.19 16 11 C -0.55 -13.98 9.28 -34.44 -0.32 -14.30 16 12 H 0.06 1.49 7.60 -52.49 -0.40 1.09 16 13 C 0.07 1.72 5.46 -17.82 -0.10 1.63 16 14 N -0.88 -25.09 13.29 55.43 0.74 -24.36 16 15 Si 0.91 19.95 29.54 -169.99 -5.02 14.92 16 16 H -0.27 -5.92 7.11 56.52 0.40 -5.52 16 17 H -0.28 -6.29 7.11 56.52 0.40 -5.89 16 18 H -0.27 -5.92 7.11 56.52 0.40 -5.52 16 19 C -0.22 -2.50 5.88 -104.95 -0.62 -3.12 16 20 C 0.39 4.86 11.19 34.19 0.38 5.24 16 21 O -0.47 -6.89 17.16 5.54 0.10 -6.79 16 22 C -0.01 -0.08 9.37 -39.08 -0.37 -0.45 16 23 C -0.10 -0.90 6.30 -39.57 -0.25 -1.15 16 24 Cl -0.07 -0.56 27.25 -51.86 -1.41 -1.97 16 25 H 0.08 0.43 8.14 -51.93 -0.42 0.01 16 26 H 0.08 0.47 6.88 -51.93 -0.36 0.11 16 27 H 0.08 0.36 8.08 -51.93 -0.42 -0.06 16 28 H 0.15 0.93 6.30 -52.49 -0.33 0.60 16 29 H 0.09 0.81 7.66 -51.93 -0.40 0.42 16 30 H 0.09 0.81 7.66 -51.93 -0.40 0.42 16 31 H 0.39 5.88 8.32 -40.82 -0.34 5.54 16 32 H 0.03 0.82 8.14 -51.93 -0.42 0.40 16 33 H 0.03 0.83 8.14 -51.93 -0.42 0.40 16 34 H 0.27 7.17 8.31 -40.82 -0.34 6.83 16 35 H 0.12 1.39 7.63 -52.49 -0.40 0.99 16 36 H 0.15 1.50 7.65 -52.49 -0.40 1.10 16 LS Contribution 336.85 15.07 5.08 5.08 Total: -1.00 -32.40 336.85 -7.36 -39.75 By element: Atomic # 1 Polarization: 4.77 SS G_CDS: -3.85 Total: 0.93 kcal Atomic # 6 Polarization: 4.09 SS G_CDS: -2.06 Total: 2.03 kcal Atomic # 7 Polarization: -38.21 SS G_CDS: 0.40 Total: -37.81 kcal Atomic # 8 Polarization: -22.44 SS G_CDS: -0.48 Total: -22.92 kcal Atomic # 14 Polarization: 19.95 SS G_CDS: -5.02 Total: 14.92 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.41 Total: -1.97 kcal Total LS contribution 5.08 Total: 5.08 kcal Total: -32.40 -7.36 -39.75 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000849982821.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.747 kcal (2) G-P(sol) polarization free energy of solvation -32.397 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.355 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.752 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.499 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds