Wall clock time and date at job start Tue Mar 31 2020 10:19:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47192 * 179.97438 * 2 1 4 4 N 1.46504 * 109.47014 * 181.01514 * 3 2 1 5 5 C 1.36798 * 120.00228 * 83.55861 * 4 3 2 6 6 H 1.07995 * 120.00294 * 168.12608 * 5 4 3 7 7 C 1.39105 * 119.99503 * 348.12355 * 5 4 3 8 8 N 1.31323 * 120.00454 * 2.46074 * 7 5 4 9 9 Si 1.86803 * 119.99534 * 182.46119 * 7 5 4 10 10 H 1.48502 * 109.46915 * 90.00184 * 9 7 5 11 11 H 1.48497 * 109.47128 * 209.99898 * 9 7 5 12 12 H 1.48497 * 109.47258 * 330.00424 * 9 7 5 13 13 C 1.34783 * 119.99825 * 263.56489 * 4 3 2 14 14 O 1.21563 * 119.99538 * 182.48407 * 13 4 3 15 15 C 1.48001 * 120.00102 * 2.47600 * 13 4 3 16 16 C 1.40060 * 120.89906 * 221.96216 * 15 13 4 17 17 C 1.37936 * 119.12570 * 180.02562 * 16 15 13 18 18 N 1.31937 * 120.98182 * 359.73967 * 17 16 15 19 19 C 1.32197 * 121.98825 * 0.52419 * 18 17 16 20 20 O 1.35685 * 119.61811 * 179.74956 * 19 18 17 21 21 C 1.42900 * 117.00039 * 359.73327 * 20 19 18 22 22 C 1.52998 * 109.47453 * 179.97438 * 21 20 19 23 23 F 1.39898 * 109.46918 * 299.99846 * 22 21 20 24 24 F 1.39898 * 109.47426 * 59.99592 * 22 21 20 25 25 C 1.38847 * 120.76174 * 359.48279 * 19 18 17 26 26 H 1.09002 * 109.47281 * 61.01890 * 3 2 1 27 27 H 1.09003 * 109.47810 * 301.01004 * 3 2 1 28 28 H 0.96996 * 119.99886 * 179.97438 * 8 7 5 29 29 H 1.07998 * 120.43708 * 359.97438 * 16 15 13 30 30 H 1.08004 * 119.50992 * 179.97438 * 17 16 15 31 31 H 1.09003 * 109.47439 * 59.99238 * 21 20 19 32 32 H 1.09000 * 109.47195 * 299.99389 * 21 20 19 33 33 H 1.09004 * 109.47550 * 179.97438 * 22 21 20 34 34 H 1.08010 * 120.52914 * 180.27532 * 25 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6079 0.0007 0.0000 4 7 3.0956 1.3819 0.0245 5 6 3.1980 2.0502 1.2137 6 1 3.7310 2.9883 1.2619 7 6 2.6155 1.5215 2.3609 8 7 2.0090 0.3577 2.3129 9 14 2.6960 2.4671 3.9700 10 1 1.5131 3.3581 4.0801 11 1 2.7030 1.5110 5.1062 12 1 3.9357 3.2838 4.0026 13 6 3.4433 1.9943 -1.1248 14 8 3.8905 3.1244 -1.1001 15 6 3.2808 1.2907 -2.4167 16 6 4.2688 1.3671 -3.4065 17 6 4.0792 0.6973 -4.5974 18 7 2.9883 -0.0133 -4.8107 19 6 2.0276 -0.1097 -3.9078 20 8 0.9233 -0.8498 -4.1799 21 6 0.8680 -1.4868 -5.4578 22 6 -0.4405 -2.2701 -5.5811 23 9 -0.5004 -3.2392 -4.5740 24 9 -1.5229 -1.3935 -5.4497 25 6 2.1379 0.5331 -2.6820 26 1 2.9715 -0.4971 -0.8990 27 1 2.9716 -0.5286 0.8808 28 1 1.6032 -0.0111 3.1130 29 1 5.1667 1.9435 -3.2399 30 1 4.8369 0.7523 -5.3651 31 1 1.7111 -2.1701 -5.5601 32 1 0.9151 -0.7317 -6.2425 33 1 -0.4829 -2.7556 -6.5561 34 1 1.3527 0.4481 -1.9452 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000270256643.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:19:21 Heat of formation + Delta-G solvation = -77.708842 kcal Electronic energy + Delta-G solvation = -25423.258632 eV Core-core repulsion = 21187.133766 eV Total energy + Delta-G solvation = -4236.124866 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 311.087 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -49.05489 -47.08812 -40.68516 -39.03435 -37.63062 -36.01315 -34.43981 -32.72882 -31.56380 -31.31784 -29.47244 -27.61127 -25.77725 -24.06645 -23.24135 -22.70967 -20.26503 -18.42346 -18.15293 -17.63705 -17.32606 -17.17522 -16.42459 -16.14622 -15.95863 -15.80352 -15.75185 -14.70915 -14.23952 -14.18727 -13.97413 -13.72498 -13.48084 -13.42887 -13.14873 -13.01691 -12.86275 -12.45135 -12.04604 -11.66939 -11.61848 -11.35019 -11.32507 -11.28693 -11.18746 -10.62581 -10.55662 -10.48684 -9.77338 -9.53224 -9.44852 -8.84488 -8.44185 -8.33182 -6.59870 -4.18894 1.08845 1.30355 2.68606 3.02388 3.13379 3.17480 3.43257 3.59307 3.59941 3.89237 3.93172 4.01119 4.03527 4.28016 4.29320 4.50810 4.69230 4.79088 5.06022 5.15040 5.19571 5.20387 5.26864 5.37107 5.50330 5.82848 5.95153 6.05285 6.39908 6.43497 6.73354 7.18548 7.27451 7.64480 7.86615 8.09420 8.71482 8.78910 8.96811 9.48962 10.34760 Molecular weight = 311.09amu Principal moments of inertia in cm(-1) A = 0.016949 B = 0.004356 C = 0.003626 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1651.604808 B = 6426.509865 C = 7720.305691 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.473 5.473 2 C 0.252 3.748 3 C 0.208 3.792 4 N -0.423 5.423 5 C -0.299 4.299 6 H 0.116 0.884 7 C 0.031 3.969 8 N -0.884 5.884 9 Si 0.943 3.057 10 H -0.275 1.275 11 H -0.280 1.280 12 H -0.266 1.266 13 C 0.478 3.522 14 O -0.566 6.566 15 C -0.017 4.017 16 C -0.165 4.165 17 C 0.131 3.869 18 N -0.542 5.542 19 C 0.316 3.684 20 O -0.293 6.293 21 C 0.020 3.980 22 C 0.270 3.730 23 F -0.198 7.198 24 F -0.199 7.199 25 C -0.173 4.173 26 H 0.078 0.922 27 H 0.154 0.846 28 H 0.278 0.722 29 H 0.145 0.855 30 H 0.163 0.837 31 H 0.097 0.903 32 H 0.096 0.904 33 H 0.130 0.870 34 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.644 -7.186 -13.932 15.897 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.154 5.154 2 C -0.065 4.065 3 C 0.081 3.919 4 N -0.141 5.141 5 C -0.426 4.426 6 H 0.134 0.866 7 C -0.172 4.172 8 N -0.524 5.524 9 Si 0.769 3.231 10 H -0.201 1.201 11 H -0.205 1.205 12 H -0.190 1.190 13 C 0.266 3.734 14 O -0.450 6.450 15 C -0.028 4.028 16 C -0.186 4.186 17 C -0.024 4.024 18 N -0.267 5.267 19 C 0.138 3.862 20 O -0.200 6.200 21 C -0.057 4.057 22 C 0.216 3.784 23 F -0.179 7.179 24 F -0.180 7.180 25 C -0.195 4.195 26 H 0.095 0.905 27 H 0.171 0.829 28 H 0.089 0.911 29 H 0.163 0.837 30 H 0.180 0.820 31 H 0.115 0.885 32 H 0.114 0.886 33 H 0.147 0.853 34 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 0.730 -7.237 -14.305 16.048 hybrid contribution 0.343 0.635 1.513 1.676 sum 1.073 -6.603 -12.792 14.436 Atomic orbital electron populations 1.80969 1.13367 1.08014 1.13082 1.29011 0.95250 0.92824 0.89392 1.19416 0.81912 0.85940 1.04603 1.43596 1.53785 1.10690 1.06050 1.19962 1.32724 1.06360 0.83544 0.86606 1.25437 0.94982 0.96243 1.00543 1.69666 1.35334 1.16780 1.30636 0.85635 0.79211 0.78905 0.79368 1.20110 1.20510 1.19006 1.17706 0.86478 0.86748 0.82435 1.90662 1.50205 1.18258 1.85838 1.20504 0.92956 0.93089 0.96265 1.22071 1.00696 1.02035 0.93820 1.22264 0.92993 0.91362 0.95733 1.67095 1.03474 1.22832 1.33311 1.19499 0.85861 0.90646 0.90207 1.86346 1.37030 1.61737 1.34898 1.23768 0.97126 0.98230 0.86617 1.22126 0.83945 0.81042 0.91279 1.93035 1.96686 1.63803 1.64377 1.93032 1.57689 1.70335 1.96935 1.21669 1.00657 1.00262 0.96891 0.90465 0.82920 0.91058 0.83680 0.81997 0.88504 0.88629 0.85295 0.83437 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -11.61 18.48 42.15 0.78 -10.83 16 2 C 0.25 5.78 10.44 -20.76 -0.22 5.56 16 3 C 0.21 4.33 4.76 -6.83 -0.03 4.29 16 4 N -0.42 -9.88 2.60 -118.96 -0.31 -10.19 16 5 C -0.30 -7.48 9.47 -15.01 -0.14 -7.63 16 6 H 0.12 3.01 7.21 -52.49 -0.38 2.63 16 7 C 0.03 0.73 5.38 -17.45 -0.09 0.64 16 8 N -0.88 -21.22 8.05 55.50 0.45 -20.77 16 9 Si 0.94 19.43 29.55 -169.99 -5.02 14.41 16 10 H -0.28 -5.87 7.11 56.52 0.40 -5.47 16 11 H -0.28 -5.64 7.11 56.52 0.40 -5.24 16 12 H -0.27 -5.38 7.11 56.52 0.40 -4.98 16 13 C 0.48 10.89 7.30 -12.26 -0.09 10.80 16 14 O -0.57 -14.53 16.58 5.31 0.09 -14.44 16 15 C -0.02 -0.32 5.01 -104.68 -0.52 -0.84 16 16 C -0.16 -2.51 9.78 -39.01 -0.38 -2.89 16 17 C 0.13 1.68 11.16 -17.62 -0.20 1.48 16 18 N -0.54 -7.80 9.18 -13.39 -0.12 -7.92 16 19 C 0.32 5.23 7.49 -17.17 -0.13 5.11 16 20 O -0.29 -4.69 10.00 -18.76 -0.19 -4.87 16 21 C 0.02 0.21 5.53 37.16 0.21 0.42 16 22 C 0.27 2.65 5.63 37.16 0.21 2.86 16 23 F -0.20 -2.55 17.28 2.25 0.04 -2.51 16 24 F -0.20 -2.59 17.28 2.25 0.04 -2.55 16 25 C -0.17 -3.21 7.63 -38.82 -0.30 -3.51 16 26 H 0.08 1.38 5.65 -51.93 -0.29 1.09 16 27 H 0.15 3.24 6.07 -51.93 -0.32 2.92 16 28 H 0.28 6.50 8.31 -40.82 -0.34 6.16 16 29 H 0.15 2.02 8.06 -52.49 -0.42 1.59 16 30 H 0.16 1.41 8.06 -52.48 -0.42 0.99 16 31 H 0.10 0.89 8.10 -51.93 -0.42 0.47 16 32 H 0.10 0.90 8.11 -51.93 -0.42 0.48 16 33 H 0.13 0.58 8.14 -51.93 -0.42 0.16 16 34 H 0.15 3.05 4.22 -52.48 -0.22 2.83 16 LS Contribution 311.81 15.07 4.70 4.70 Total: -1.00 -31.36 311.81 -3.69 -35.05 By element: Atomic # 1 Polarization: 6.09 SS G_CDS: -2.45 Total: 3.64 kcal Atomic # 6 Polarization: 17.98 SS G_CDS: -1.69 Total: 16.29 kcal Atomic # 7 Polarization: -50.51 SS G_CDS: 0.79 Total: -49.72 kcal Atomic # 8 Polarization: -19.21 SS G_CDS: -0.10 Total: -19.31 kcal Atomic # 9 Polarization: -5.14 SS G_CDS: 0.08 Total: -5.06 kcal Atomic # 14 Polarization: 19.43 SS G_CDS: -5.02 Total: 14.41 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -31.36 -3.69 -35.05 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000270256643.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.658 kcal (2) G-P(sol) polarization free energy of solvation -31.358 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.016 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.693 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.051 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.709 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds