Wall clock time and date at job start Tue Mar 31 2020 11:08:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52997 * 109.46894 * 2 1 4 4 O 1.42906 * 109.46802 * 120.00022 * 2 1 3 5 5 C 1.35916 * 117.00110 * 59.06476 * 4 2 1 6 6 C 1.38722 * 120.04406 * 6.17440 * 5 4 2 7 7 C 1.38146 * 119.95930 * 180.22941 * 6 5 4 8 8 C 1.38364 * 120.03828 * 359.48807 * 7 6 5 9 9 Cl 1.73604 * 119.95536 * 180.27466 * 8 7 6 10 10 C 1.38366 * 120.08675 * 0.26037 * 8 7 6 11 11 C 1.38138 * 120.04266 * 359.97438 * 10 8 7 12 12 C 1.50695 * 109.47192 * 239.99749 * 2 1 3 13 13 O 1.21284 * 120.00064 * 240.00170 * 12 2 1 14 14 N 1.34778 * 119.99897 * 60.00463 * 12 2 1 15 15 C 1.46503 * 120.00107 * 180.02562 * 14 12 2 16 16 C 1.52996 * 109.47433 * 180.02562 * 15 14 12 17 17 C 1.50695 * 109.47223 * 179.97438 * 16 15 14 18 18 H 1.07995 * 120.00319 * 359.97438 * 17 16 15 19 19 C 1.37881 * 120.00144 * 179.97438 * 17 16 15 20 20 N 1.31509 * 120.00246 * 179.97438 * 19 17 16 21 21 Si 1.86807 * 119.99654 * 0.02562 * 19 17 16 22 22 H 1.48501 * 109.47075 * 89.99749 * 21 19 17 23 23 H 1.48500 * 109.46845 * 209.99709 * 21 19 17 24 24 H 1.48498 * 109.47209 * 329.99976 * 21 19 17 25 25 H 1.09003 * 109.47226 * 311.29622 * 1 2 3 26 26 H 1.09003 * 109.46679 * 71.29498 * 1 2 3 27 27 H 1.09000 * 109.47188 * 191.29310 * 1 2 3 28 28 H 1.09004 * 109.46485 * 175.29571 * 3 2 1 29 29 H 1.08995 * 109.47196 * 295.29160 * 3 2 1 30 30 H 1.09005 * 109.47167 * 55.30180 * 3 2 1 31 31 H 1.08000 * 120.01934 * 359.97311 * 6 5 4 32 32 H 1.07995 * 119.97977 * 179.76376 * 7 6 5 33 33 H 1.08004 * 119.97600 * 180.02562 * 10 8 7 34 34 H 1.08007 * 120.02031 * 180.02562 * 11 10 8 35 35 H 0.96993 * 120.00353 * 359.97438 * 14 12 2 36 36 H 1.09005 * 109.46538 * 299.99614 * 15 14 12 37 37 H 1.09001 * 109.46962 * 59.99349 * 15 14 12 38 38 H 1.09004 * 109.46496 * 299.99661 * 16 15 14 39 39 H 1.08994 * 109.47217 * 59.99191 * 16 15 14 40 40 H 0.97001 * 120.00065 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 8 2.0063 -0.6737 1.1668 5 6 1.6250 -1.9679 1.3310 6 6 0.9174 -2.6159 0.3291 7 6 0.5266 -3.9299 0.4998 8 6 0.8498 -4.6029 1.6647 9 17 0.3637 -6.2563 1.8739 10 6 1.5600 -3.9599 2.6630 11 6 1.9483 -2.6445 2.4980 12 6 2.0323 -0.7104 -1.2304 13 8 2.7296 -1.6965 -1.1191 14 7 1.7068 -0.2500 -2.4545 15 6 2.1947 -0.9409 -3.6507 16 6 1.6855 -0.2192 -4.9000 17 6 2.1878 -0.9297 -6.1303 18 1 2.8086 -1.8078 -6.0313 19 6 1.8549 -0.4585 -7.3827 20 7 2.2938 -1.0782 -8.4564 21 14 0.7817 1.0608 -7.5541 22 1 1.6409 2.2712 -7.5996 23 1 -0.0103 0.9686 -8.8069 24 1 -0.1386 1.1505 -6.3921 25 1 -0.3634 0.6782 0.7721 26 1 -0.3633 0.3296 -0.9734 27 1 -0.3633 -1.0078 0.2012 28 1 3.1267 1.4436 0.0843 29 1 1.7471 1.9314 -0.9291 30 1 1.6095 1.9801 0.8449 31 1 0.6685 -2.0921 -0.5820 32 1 -0.0276 -4.4335 -0.2784 33 1 1.8117 -4.4871 3.5714 34 1 2.5031 -2.1431 3.2774 35 1 1.1489 0.5385 -2.5436 36 1 3.2847 -0.9413 -3.6508 37 1 1.8310 -1.9684 -3.6505 38 1 0.5954 -0.2185 -4.9000 39 1 2.0495 0.8081 -4.8998 40 1 2.0598 -0.7465 -9.3374 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000273089812.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:08:03 Heat of formation + Delta-G solvation = -50.659153 kcal Electronic energy + Delta-G solvation = -23577.334168 eV Core-core repulsion = 19997.719288 eV Total energy + Delta-G solvation = -3579.614880 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 311.108 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -41.49011 -39.04807 -37.68644 -36.30263 -35.21340 -33.88442 -32.67235 -31.26154 -30.13563 -29.69892 -27.66652 -25.40622 -23.86295 -22.72339 -22.35965 -20.94829 -20.06867 -18.43287 -17.20446 -16.97101 -16.61485 -16.25290 -15.52530 -15.30876 -14.75428 -14.35132 -14.29838 -14.18906 -13.80047 -13.76838 -13.17514 -13.05467 -12.97401 -12.68907 -12.55198 -12.52416 -12.42134 -12.08987 -11.59330 -11.52027 -11.40450 -11.23520 -10.92592 -10.78386 -10.48652 -10.36274 -10.03648 -9.58560 -9.38335 -9.15767 -8.75717 -8.65727 -8.09842 -6.17015 -4.17915 1.13634 1.16157 2.08943 2.55840 2.86508 3.19602 3.22768 3.26664 3.28543 3.53841 4.31384 4.37336 4.46471 4.57731 4.67352 4.69709 5.00144 5.13536 5.15485 5.16654 5.25384 5.31088 5.37579 5.45788 5.71462 5.75647 5.79331 5.89023 5.96859 6.08094 6.14004 6.17502 6.42055 6.44413 6.54532 7.00016 7.12219 7.14021 7.58038 7.64927 8.26212 8.38195 8.87035 9.42463 10.95964 Molecular weight = 311.11amu Principal moments of inertia in cm(-1) A = 0.016097 B = 0.003313 C = 0.002905 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1738.986789 B = 8448.642971 C = 9637.705201 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C 0.094 3.906 3 C -0.136 4.136 4 O -0.285 6.285 5 C 0.149 3.851 6 C -0.167 4.167 7 C -0.075 4.075 8 C -0.072 4.072 9 Cl -0.079 7.079 10 C -0.078 4.078 11 C -0.143 4.143 12 C 0.481 3.519 13 O -0.522 6.522 14 N -0.718 5.718 15 C 0.129 3.871 16 C -0.021 4.021 17 C -0.525 4.525 18 H 0.076 0.924 19 C 0.070 3.930 20 N -0.897 5.897 21 Si 0.882 3.118 22 H -0.276 1.276 23 H -0.286 1.286 24 H -0.266 1.266 25 H 0.081 0.919 26 H 0.081 0.919 27 H 0.083 0.917 28 H 0.075 0.925 29 H 0.085 0.915 30 H 0.079 0.921 31 H 0.138 0.862 32 H 0.134 0.866 33 H 0.137 0.863 34 H 0.137 0.863 35 H 0.396 0.604 36 H 0.065 0.935 37 H 0.064 0.936 38 H 0.022 0.978 39 H 0.018 0.982 40 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.997 1.886 23.049 23.891 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.252 4.252 2 C 0.052 3.948 3 C -0.194 4.194 4 O -0.197 6.197 5 C 0.103 3.897 6 C -0.185 4.185 7 C -0.094 4.094 8 C -0.099 4.099 9 Cl -0.051 7.051 10 C -0.096 4.096 11 C -0.162 4.162 12 C 0.265 3.735 13 O -0.398 6.398 14 N -0.370 5.370 15 C 0.007 3.993 16 C -0.059 4.059 17 C -0.563 4.563 18 H 0.094 0.906 19 C -0.132 4.132 20 N -0.535 5.535 21 Si 0.709 3.291 22 H -0.202 1.202 23 H -0.212 1.212 24 H -0.191 1.191 25 H 0.099 0.901 26 H 0.100 0.900 27 H 0.102 0.898 28 H 0.094 0.906 29 H 0.104 0.896 30 H 0.098 0.902 31 H 0.156 0.844 32 H 0.152 0.848 33 H 0.155 0.845 34 H 0.155 0.845 35 H 0.230 0.770 36 H 0.083 0.917 37 H 0.083 0.917 38 H 0.040 0.960 39 H 0.036 0.964 40 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -5.400 1.138 23.044 23.695 hybrid contribution -0.849 0.920 -0.669 1.420 sum -6.249 2.059 22.375 23.322 Atomic orbital electron populations 1.22815 0.92626 1.05221 1.04550 1.21868 0.95255 0.93768 0.83877 1.21815 1.03257 0.90322 1.03964 1.86172 1.69985 1.22156 1.41423 1.18871 0.93313 0.83778 0.93722 1.21494 1.02113 0.95801 0.99132 1.20846 0.98846 0.93759 0.95928 1.20727 1.05147 0.86513 0.97487 1.98350 1.90762 1.18569 1.97369 1.20744 0.96872 0.93668 0.98353 1.20272 1.04913 0.94143 0.96895 1.20914 0.81766 0.85453 0.85342 1.90816 1.37276 1.25448 1.86279 1.46395 1.52702 1.31758 1.06143 1.21586 0.99172 0.96286 0.82266 1.19789 0.96790 0.96246 0.93051 1.20891 1.32905 1.13960 0.88589 0.90615 1.25002 0.95572 0.96909 0.95738 1.69897 1.45211 1.40343 0.98005 0.86757 0.81016 0.83527 0.77787 1.20188 1.21209 1.19112 0.90054 0.89981 0.89806 0.90593 0.89611 0.90231 0.84418 0.84849 0.84546 0.84473 0.76966 0.91706 0.91743 0.95986 0.96390 0.92471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -1.76 8.14 37.16 0.30 -1.46 16 2 C 0.09 1.08 0.96 -91.77 -0.09 1.00 16 3 C -0.14 -1.19 8.77 37.16 0.33 -0.87 16 4 O -0.28 -3.76 9.63 -39.39 -0.38 -4.14 16 5 C 0.15 2.01 5.53 -39.22 -0.22 1.79 16 6 C -0.17 -2.31 5.53 -39.44 -0.22 -2.53 16 7 C -0.07 -0.98 9.82 -39.57 -0.39 -1.37 16 8 C -0.07 -0.88 6.32 -39.49 -0.25 -1.13 16 9 Cl -0.08 -0.89 28.95 -51.86 -1.50 -2.39 16 10 C -0.08 -0.86 9.82 -39.57 -0.39 -1.24 16 11 C -0.14 -1.67 9.99 -39.44 -0.39 -2.07 16 12 C 0.48 7.28 4.56 -10.99 -0.05 7.23 16 13 O -0.52 -10.02 13.80 -14.36 -0.20 -10.22 16 14 N -0.72 -10.67 5.23 -60.29 -0.32 -10.98 16 15 C 0.13 2.47 5.61 -4.04 -0.02 2.45 16 16 C -0.02 -0.46 4.15 -27.89 -0.12 -0.57 16 17 C -0.53 -14.30 9.66 -34.44 -0.33 -14.63 16 18 H 0.08 2.25 7.99 -52.49 -0.42 1.84 16 19 C 0.07 1.96 5.47 -17.82 -0.10 1.86 16 20 N -0.90 -26.83 13.96 55.43 0.77 -26.06 16 21 Si 0.88 20.40 27.47 -169.99 -4.67 15.73 16 22 H -0.28 -6.27 7.11 56.52 0.40 -5.87 16 23 H -0.29 -6.64 7.11 56.52 0.40 -6.24 16 24 H -0.27 -5.75 6.54 56.52 0.37 -5.38 16 25 H 0.08 0.58 8.07 -51.93 -0.42 0.16 16 26 H 0.08 0.64 7.28 -51.93 -0.38 0.27 16 27 H 0.08 0.84 4.85 -51.93 -0.25 0.59 16 28 H 0.08 0.73 8.14 -51.93 -0.42 0.31 16 29 H 0.09 0.62 7.43 -51.93 -0.39 0.24 16 30 H 0.08 0.54 8.11 -51.93 -0.42 0.12 16 31 H 0.14 1.96 3.84 -52.49 -0.20 1.76 16 32 H 0.13 1.59 8.06 -52.49 -0.42 1.17 16 33 H 0.14 1.16 8.06 -52.48 -0.42 0.74 16 34 H 0.14 1.31 8.06 -52.48 -0.42 0.88 16 35 H 0.40 4.72 7.17 -40.82 -0.29 4.42 16 36 H 0.06 1.34 8.14 -51.93 -0.42 0.91 16 37 H 0.06 1.31 8.14 -51.93 -0.42 0.89 16 38 H 0.02 0.46 7.20 -51.93 -0.37 0.09 16 39 H 0.02 0.37 7.57 -51.93 -0.39 -0.02 16 40 H 0.27 7.41 8.31 -40.82 -0.34 7.07 16 LS Contribution 340.53 15.07 5.13 5.13 Total: -1.00 -32.20 340.53 -8.33 -40.53 By element: Atomic # 1 Polarization: 9.18 SS G_CDS: -5.24 Total: 3.94 kcal Atomic # 6 Polarization: -9.61 SS G_CDS: -1.93 Total: -11.54 kcal Atomic # 7 Polarization: -37.50 SS G_CDS: 0.46 Total: -37.04 kcal Atomic # 8 Polarization: -13.79 SS G_CDS: -0.58 Total: -14.36 kcal Atomic # 14 Polarization: 20.40 SS G_CDS: -4.67 Total: 15.73 kcal Atomic # 17 Polarization: -0.89 SS G_CDS: -1.50 Total: -2.39 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -32.20 -8.33 -40.53 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000273089812.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.126 kcal (2) G-P(sol) polarization free energy of solvation -32.201 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.327 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.332 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.533 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.659 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds