Wall clock time and date at job start Tue Mar 31 2020 10:00:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 C 1.46897 * 110.99917 * 2 1 4 4 C 1.53246 * 109.33860 * 172.74587 * 3 2 1 5 5 N 1.47074 * 108.52018 * 53.82573 * 4 3 2 6 6 C 1.34781 * 120.88032 * 128.82310 * 5 4 3 7 7 O 1.21587 * 120.00032 * 185.21484 * 6 5 4 8 8 N 1.34772 * 119.99907 * 5.21080 * 6 5 4 9 9 C 1.46502 * 119.99954 * 175.02695 * 8 6 5 10 10 C 1.53002 * 109.47122 * 180.02562 * 9 8 6 11 11 C 1.53003 * 109.47188 * 300.00050 * 10 9 8 12 12 C 1.53001 * 109.47434 * 59.99928 * 10 9 8 13 13 C 1.53004 * 109.47233 * 180.02562 * 10 9 8 14 14 C 1.50695 * 109.47190 * 180.02562 * 13 10 9 15 15 H 1.08003 * 120.00129 * 359.97438 * 14 13 10 16 16 C 1.37874 * 120.00019 * 180.02562 * 14 13 10 17 17 N 1.31513 * 120.00284 * 180.02562 * 16 14 13 18 18 Si 1.86803 * 120.00095 * 359.97438 * 16 14 13 19 19 H 1.48499 * 109.46752 * 89.99954 * 18 16 14 20 20 H 1.48493 * 109.47585 * 210.00309 * 18 16 14 21 21 H 1.48499 * 109.47043 * 330.00503 * 18 16 14 22 22 C 1.47078 * 118.23927 * 309.08278 * 5 4 3 23 23 C 1.46893 * 111.00211 * 235.69086 * 2 1 3 24 24 C 1.53006 * 109.49722 * 307.21580 * 23 2 1 25 25 C 1.52998 * 109.49301 * 67.27081 * 23 2 1 26 26 H 1.09004 * 109.46686 * 63.95926 * 1 2 3 27 27 H 1.09003 * 109.47019 * 183.95705 * 1 2 3 28 28 H 1.08994 * 109.47418 * 303.96146 * 1 2 3 29 29 H 1.08990 * 109.49824 * 52.78266 * 3 2 1 30 30 H 1.09003 * 109.48715 * 292.69820 * 3 2 1 31 31 H 1.09000 * 109.62504 * 294.11682 * 4 3 2 32 32 H 1.09003 * 109.62675 * 173.53490 * 4 3 2 33 33 H 0.97000 * 120.00452 * 355.03142 * 8 6 5 34 34 H 1.08998 * 109.47063 * 60.00475 * 9 8 6 35 35 H 1.08998 * 109.47124 * 300.00060 * 9 8 6 36 36 H 1.08995 * 109.46822 * 59.99899 * 11 10 9 37 37 H 1.08995 * 109.47442 * 180.02562 * 11 10 9 38 38 H 1.08998 * 109.46679 * 299.99976 * 11 10 9 39 39 H 1.08998 * 109.47124 * 59.99516 * 12 10 9 40 40 H 1.08995 * 109.47223 * 180.02562 * 12 10 9 41 41 H 1.09008 * 109.46903 * 300.00232 * 12 10 9 42 42 H 1.08998 * 109.46544 * 300.00006 * 13 10 9 43 43 H 1.08998 * 109.46878 * 59.99320 * 13 10 9 44 44 H 0.97002 * 120.00494 * 179.97438 * 17 16 14 45 45 H 1.09000 * 109.62886 * 170.62498 * 22 5 4 46 46 H 1.08993 * 109.63544 * 291.21151 * 22 5 4 47 47 H 1.08997 * 109.46532 * 59.99692 * 24 23 2 48 48 H 1.08997 * 109.47255 * 179.97438 * 24 23 2 49 49 H 1.08998 * 109.46981 * 300.00198 * 24 23 2 50 50 H 1.08998 * 109.47397 * 59.99579 * 25 23 2 51 51 H 1.09001 * 109.47590 * 180.02562 * 25 23 2 52 52 H 1.09009 * 109.47153 * 299.99773 * 25 23 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 3.5164 1.3311 0.1826 5 7 4.0869 0.4459 -0.8441 6 6 5.1057 0.8581 -1.6243 7 8 5.5025 0.1506 -2.5301 8 7 5.6845 2.0545 -1.4006 9 6 6.8606 2.4557 -2.1766 10 6 7.3172 3.8456 -1.7286 11 6 6.1876 4.8519 -1.9575 12 6 7.6751 3.8103 -0.2415 13 6 8.5451 4.2650 -2.5394 14 6 8.9952 5.6337 -2.0978 15 1 8.4588 6.1528 -1.3172 16 6 10.0910 6.2238 -2.6910 17 7 10.4841 7.4180 -2.3053 18 14 11.0183 5.3263 -4.0416 19 1 10.4295 5.6723 -5.3603 20 1 12.4465 5.7319 -4.0154 21 1 10.9158 3.8611 -3.8230 22 6 3.5124 -0.8989 -1.0006 23 6 1.9955 -0.7730 -1.1327 24 6 1.3641 -2.1667 -1.1374 25 6 1.6582 -0.0554 -2.4412 26 1 -0.3633 0.4512 -0.9234 27 1 -0.3633 -1.0252 0.0709 28 1 -0.3634 0.5740 0.8523 29 1 1.5457 1.9337 0.8182 30 1 1.7556 1.8530 -0.9480 31 1 3.7561 0.9450 1.1733 32 1 3.9256 2.3351 0.0689 33 1 5.3225 2.6499 -0.7258 34 1 6.6057 2.4806 -3.2360 35 1 7.6655 1.7391 -2.0132 36 1 5.3126 4.5533 -1.3802 37 1 6.5129 5.8422 -1.6388 38 1 5.9326 4.8771 -3.0169 39 1 8.4798 3.0934 -0.0784 40 1 8.0000 4.8006 0.0777 41 1 6.8000 3.5117 0.3358 42 1 9.3499 3.5482 -2.3768 43 1 8.2896 4.2902 -3.5988 44 1 11.2554 7.8330 -2.7224 45 1 3.9189 -1.3687 -1.8963 46 1 3.7517 -1.5035 -0.1259 47 1 0.2821 -2.0750 -1.2318 48 1 1.7547 -2.7397 -1.9783 49 1 1.6054 -2.6779 -0.2054 50 1 2.1089 0.9371 -2.4380 51 1 2.0486 -0.6294 -3.2816 52 1 0.5763 0.0373 -2.5364 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000603430345.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:00:48 Heat of formation + Delta-G solvation = -20.442561 kcal Electronic energy + Delta-G solvation = -27752.524339 eV Core-core repulsion = 24173.302619 eV Total energy + Delta-G solvation = -3579.221720 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 311.231 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -40.86194 -39.13188 -37.23474 -34.99762 -33.77294 -33.15444 -32.02128 -29.30720 -27.95560 -27.66104 -27.36306 -26.55545 -25.86982 -24.37880 -23.15196 -22.30407 -20.06610 -18.96638 -18.51572 -17.56299 -16.82899 -16.55875 -15.95115 -15.75736 -15.18636 -14.85319 -14.66369 -14.42902 -14.22402 -13.83241 -13.73736 -13.56334 -13.34870 -12.94956 -12.76026 -12.53622 -12.40802 -12.27754 -12.24384 -12.18520 -11.98782 -11.62649 -11.46233 -11.26352 -11.24000 -11.11977 -11.04598 -10.98714 -10.60920 -10.46230 -10.01920 -9.96070 -9.73782 -9.50300 -9.01514 -8.98608 -8.70685 -8.52878 -8.36758 -6.03715 -4.00915 2.64942 3.30607 3.32495 3.40465 3.45001 3.52336 3.96806 4.44162 4.46525 4.53881 4.58527 4.74822 4.90322 4.91015 5.08921 5.17526 5.26486 5.29140 5.30760 5.34219 5.39767 5.48254 5.51521 5.53683 5.55664 5.57697 5.64863 5.66859 5.73899 5.81944 6.00938 6.12108 6.12840 6.17094 6.33744 6.37141 6.52299 6.60042 6.64371 6.72507 6.74498 6.91984 7.01851 7.01883 7.06016 7.21643 7.38051 7.78671 8.06657 8.53236 8.72308 9.00240 9.59139 11.08998 Molecular weight = 311.23amu Principal moments of inertia in cm(-1) A = 0.029875 B = 0.002834 C = 0.002713 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 937.017212 B = 9876.798798 C =10317.246232 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 N -0.529 5.529 3 C 0.036 3.964 4 C 0.117 3.883 5 N -0.633 5.633 6 C 0.705 3.295 7 O -0.593 6.593 8 N -0.737 5.737 9 C 0.144 3.856 10 C -0.063 4.063 11 C -0.127 4.127 12 C -0.127 4.127 13 C -0.002 4.002 14 C -0.510 4.510 15 H 0.078 0.922 16 C 0.066 3.934 17 N -0.904 5.904 18 Si 0.875 3.125 19 H -0.278 1.278 20 H -0.289 1.289 21 H -0.265 1.265 22 C 0.147 3.853 23 C 0.091 3.909 24 C -0.140 4.140 25 C -0.176 4.176 26 H 0.028 0.972 27 H 0.073 0.927 28 H 0.067 0.933 29 H 0.086 0.914 30 H 0.045 0.955 31 H 0.076 0.924 32 H 0.081 0.919 33 H 0.394 0.606 34 H 0.061 0.939 35 H 0.061 0.939 36 H 0.028 0.972 37 H 0.072 0.928 38 H 0.047 0.953 39 H 0.047 0.953 40 H 0.072 0.928 41 H 0.029 0.971 42 H 0.019 0.981 43 H 0.014 0.986 44 H 0.262 0.738 45 H 0.096 0.904 46 H 0.069 0.931 47 H 0.061 0.939 48 H 0.064 0.936 49 H 0.066 0.934 50 H 0.061 0.939 51 H 0.064 0.936 52 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -21.247 -15.687 6.140 27.115 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.129 4.129 2 N -0.253 5.253 3 C -0.093 4.093 4 C -0.007 4.007 5 N -0.371 5.371 6 C 0.407 3.593 7 O -0.472 6.472 8 N -0.394 5.394 9 C 0.020 3.980 10 C -0.063 4.063 11 C -0.184 4.184 12 C -0.184 4.184 13 C -0.040 4.040 14 C -0.548 4.548 15 H 0.096 0.904 16 C -0.134 4.134 17 N -0.544 5.544 18 Si 0.702 3.298 19 H -0.204 1.204 20 H -0.215 1.215 21 H -0.189 1.189 22 C 0.023 3.977 23 C 0.000 4.000 24 C -0.198 4.198 25 C -0.235 4.235 26 H 0.046 0.954 27 H 0.092 0.908 28 H 0.086 0.914 29 H 0.105 0.895 30 H 0.063 0.937 31 H 0.095 0.905 32 H 0.099 0.901 33 H 0.231 0.769 34 H 0.080 0.920 35 H 0.079 0.921 36 H 0.047 0.953 37 H 0.091 0.909 38 H 0.066 0.934 39 H 0.066 0.934 40 H 0.091 0.909 41 H 0.048 0.952 42 H 0.037 0.963 43 H 0.032 0.968 44 H 0.072 0.928 45 H 0.114 0.886 46 H 0.087 0.913 47 H 0.080 0.920 48 H 0.083 0.917 49 H 0.085 0.915 50 H 0.080 0.920 51 H 0.083 0.917 52 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -20.602 -16.284 5.871 26.908 hybrid contribution 0.071 0.472 -1.154 1.249 sum -20.530 -15.812 4.717 26.339 Atomic orbital electron populations 1.22461 0.87408 1.02518 1.00529 1.62180 1.07755 1.13114 1.42283 1.22541 0.95209 0.89995 1.01576 1.21687 0.92487 0.94242 0.92319 1.47248 1.36004 1.16030 1.37828 1.15884 0.79610 0.82140 0.81699 1.90893 1.66584 1.56480 1.33193 1.45484 1.33048 1.17736 1.43157 1.21498 0.85349 0.96333 0.94784 1.20699 0.97403 0.91507 0.96721 1.21761 0.95675 1.00525 1.00474 1.21758 0.99085 1.03026 0.94562 1.19587 0.92025 0.97628 0.94721 1.21076 1.12741 0.99780 1.21209 0.90405 1.24995 0.97043 0.94681 0.96720 1.69900 1.26535 1.15002 1.42918 0.86859 0.79155 0.80962 0.82807 1.20390 1.21525 1.18946 1.21445 0.90181 0.82993 1.03080 1.21394 0.95216 0.94382 0.89000 1.21883 1.00633 0.94624 1.02686 1.22391 1.01089 1.01849 0.98131 0.95366 0.90814 0.91434 0.89521 0.93650 0.90546 0.90099 0.76874 0.92043 0.92094 0.95272 0.90888 0.93424 0.93367 0.90908 0.95185 0.96320 0.96791 0.92808 0.88567 0.91259 0.92033 0.91724 0.91485 0.92049 0.91704 0.92709 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.12 8.77 60.07 0.53 0.65 16 2 N -0.53 -4.28 4.68 -227.14 -1.06 -5.34 16 3 C 0.04 0.29 5.25 -3.70 -0.02 0.27 16 4 C 0.12 1.06 6.54 -3.60 -0.02 1.03 16 5 N -0.63 -7.54 2.49 -178.47 -0.44 -7.99 16 6 C 0.71 10.95 8.31 -86.92 -0.72 10.23 16 7 O -0.59 -11.47 15.80 5.29 0.08 -11.38 16 8 N -0.74 -10.80 4.87 -65.22 -0.32 -11.12 16 9 C 0.14 2.48 4.57 -4.04 -0.02 2.46 16 10 C -0.06 -1.15 0.54 -154.50 -0.08 -1.24 16 11 C -0.13 -2.20 8.05 37.16 0.30 -1.90 16 12 C -0.13 -2.20 8.05 37.16 0.30 -1.90 16 13 C 0.00 -0.04 3.11 -27.88 -0.09 -0.13 16 14 C -0.51 -13.63 8.20 -34.44 -0.28 -13.91 16 15 H 0.08 2.19 5.92 -52.48 -0.31 1.88 16 16 C 0.07 1.88 5.47 -17.82 -0.10 1.79 16 17 N -0.90 -27.24 13.96 55.43 0.77 -26.46 16 18 Si 0.87 21.58 27.47 -169.99 -4.67 16.91 16 19 H -0.28 -6.80 7.11 56.52 0.40 -6.39 16 20 H -0.29 -7.13 7.11 56.52 0.40 -6.73 16 21 H -0.26 -6.34 6.54 56.52 0.37 -5.97 16 22 C 0.15 1.58 5.24 -3.83 -0.02 1.56 16 23 C 0.09 0.79 0.68 -131.71 -0.09 0.70 16 24 C -0.14 -0.96 8.00 37.16 0.30 -0.66 16 25 C -0.18 -1.68 7.67 37.16 0.28 -1.39 16 26 H 0.03 0.19 6.53 -51.93 -0.34 -0.15 16 27 H 0.07 0.42 6.18 -51.93 -0.32 0.10 16 28 H 0.07 0.38 8.08 -51.93 -0.42 -0.04 16 29 H 0.09 0.56 8.07 -51.93 -0.42 0.14 16 30 H 0.05 0.41 6.10 -51.93 -0.32 0.09 16 31 H 0.08 0.65 8.14 -51.93 -0.42 0.23 16 32 H 0.08 0.68 5.74 -51.93 -0.30 0.38 16 33 H 0.39 4.94 3.70 -40.82 -0.15 4.79 16 34 H 0.06 1.13 8.14 -51.93 -0.42 0.70 16 35 H 0.06 1.11 8.14 -51.93 -0.42 0.69 16 36 H 0.03 0.41 6.86 -51.93 -0.36 0.05 16 37 H 0.07 1.41 6.62 -51.93 -0.34 1.07 16 38 H 0.05 0.83 8.14 -51.93 -0.42 0.41 16 39 H 0.05 0.84 8.14 -51.93 -0.42 0.42 16 40 H 0.07 1.41 6.62 -51.93 -0.34 1.06 16 41 H 0.03 0.42 6.86 -51.92 -0.36 0.07 16 42 H 0.02 0.44 7.20 -51.93 -0.37 0.06 16 43 H 0.01 0.32 7.57 -51.93 -0.39 -0.07 16 44 H 0.26 7.47 8.31 -40.82 -0.34 7.13 16 45 H 0.10 1.19 7.04 -51.93 -0.37 0.83 16 46 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 47 H 0.06 0.37 6.31 -51.93 -0.33 0.04 16 48 H 0.06 0.42 8.14 -51.93 -0.42 0.00 16 49 H 0.07 0.45 8.14 -51.93 -0.42 0.02 16 50 H 0.06 0.70 5.93 -51.93 -0.31 0.39 16 51 H 0.06 0.66 8.14 -51.93 -0.42 0.23 16 52 H 0.05 0.46 6.60 -51.92 -0.34 0.12 16 LS Contribution 377.99 15.07 5.70 5.70 Total: -1.00 -31.56 377.99 -8.73 -40.30 By element: Atomic # 1 Polarization: 10.90 SS G_CDS: -9.06 Total: 1.84 kcal Atomic # 6 Polarization: -2.71 SS G_CDS: 0.26 Total: -2.45 kcal Atomic # 7 Polarization: -49.86 SS G_CDS: -1.05 Total: -50.91 kcal Atomic # 8 Polarization: -11.47 SS G_CDS: 0.08 Total: -11.38 kcal Atomic # 14 Polarization: 21.58 SS G_CDS: -4.67 Total: 16.91 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -31.56 -8.73 -40.30 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000603430345.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.857 kcal (2) G-P(sol) polarization free energy of solvation -31.565 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.708 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.734 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.299 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.443 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds