Wall clock time and date at job start Tue Mar 31 2020 10:37:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46903 * 1 3 3 C 1.46901 * 110.99917 * 2 1 4 4 C 1.46897 * 110.99957 * 123.95058 * 2 1 3 5 5 C 1.52996 * 109.46997 * 66.05038 * 4 2 1 6 6 C 1.53000 * 109.47210 * 179.97438 * 5 4 2 7 7 N 1.46506 * 109.46992 * 179.97438 * 6 5 4 8 8 C 1.46499 * 119.99936 * 90.00137 * 7 6 5 9 9 C 1.50703 * 109.47126 * 89.99796 * 8 7 6 10 10 H 1.08002 * 119.99820 * 359.97438 * 9 8 7 11 11 C 1.37876 * 119.99889 * 180.02562 * 9 8 7 12 12 N 1.31520 * 119.99905 * 179.97438 * 11 9 8 13 13 Si 1.86803 * 120.00302 * 359.97438 * 11 9 8 14 14 H 1.48503 * 109.47082 * 89.99861 * 13 11 9 15 15 H 1.48492 * 109.47090 * 210.00394 * 13 11 9 16 16 H 1.48499 * 109.46812 * 330.00449 * 13 11 9 17 17 C 1.34773 * 119.99969 * 269.72101 * 7 6 5 18 18 O 1.21281 * 120.00220 * 0.02562 * 17 7 6 19 19 C 1.50706 * 120.00080 * 180.02562 * 17 7 6 20 20 C 1.52992 * 109.47274 * 180.02562 * 19 17 7 21 21 O 1.42895 * 110.01867 * 64.29699 * 20 19 17 22 22 C 1.54274 * 110.02966 * 302.90525 * 20 19 17 23 23 C 1.54966 * 104.15832 * 217.13758 * 22 20 19 24 24 C 1.54888 * 102.77985 * 37.88961 * 23 22 20 25 25 C 1.53872 * 110.03130 * 185.69372 * 20 19 17 26 26 H 1.09001 * 109.46838 * 296.04947 * 1 2 3 27 27 H 1.09003 * 109.47108 * 56.04340 * 1 2 3 28 28 H 1.08994 * 109.47109 * 176.04665 * 1 2 3 29 29 H 1.08994 * 109.47188 * 183.95526 * 3 2 1 30 30 H 1.09002 * 109.47018 * 303.95368 * 3 2 1 31 31 H 1.08999 * 109.47203 * 63.94866 * 3 2 1 32 32 H 1.08997 * 109.47661 * 306.04889 * 4 2 1 33 33 H 1.09000 * 109.46973 * 186.04524 * 4 2 1 34 34 H 1.09000 * 109.47531 * 59.99474 * 5 4 2 35 35 H 1.09008 * 109.47250 * 300.00049 * 5 4 2 36 36 H 1.09000 * 109.46884 * 60.00289 * 6 5 4 37 37 H 1.09000 * 109.46955 * 299.99604 * 6 5 4 38 38 H 1.08994 * 109.47173 * 210.00167 * 8 7 6 39 39 H 1.09005 * 109.47077 * 330.00338 * 8 7 6 40 40 H 0.96998 * 119.99775 * 179.97438 * 12 11 9 41 41 H 1.09004 * 109.46762 * 300.00389 * 19 17 7 42 42 H 1.08998 * 109.46924 * 59.99727 * 19 17 7 43 43 H 0.96700 * 114.00473 * 300.69854 * 21 20 19 44 44 H 1.08998 * 110.48706 * 335.78648 * 22 20 19 45 45 H 1.09000 * 110.48475 * 98.43433 * 22 20 19 46 46 H 1.09001 * 110.72137 * 279.57346 * 23 22 20 47 47 H 1.08997 * 110.76240 * 156.22736 * 23 22 20 48 48 H 1.08994 * 110.49082 * 203.40237 * 24 23 22 49 49 H 1.09004 * 110.48281 * 80.75575 * 24 23 22 50 50 H 1.09008 * 110.03195 * 238.56410 * 25 20 19 51 51 H 1.09002 * 110.03638 * 359.97438 * 25 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3715 0.0000 4 6 1.9955 -0.7659 1.1376 5 6 1.6315 -2.2425 0.9704 6 6 2.1804 -3.0404 2.1549 7 7 1.8313 -4.4542 1.9950 8 6 2.7389 -5.3567 1.2821 9 6 3.7103 -5.9672 2.2592 10 1 3.6572 -5.7085 3.3064 11 6 4.6674 -6.8551 1.8160 12 7 5.5155 -7.3876 2.6687 13 14 4.7596 -7.3020 0.0046 14 1 5.6694 -6.3578 -0.6925 15 1 5.2787 -8.6860 -0.1380 16 1 3.4040 -7.2174 -0.5957 17 6 0.6781 -4.9259 2.5087 18 8 -0.0711 -4.1798 3.1029 19 6 0.3193 -6.3804 2.3447 20 6 -1.0294 -6.6516 3.0141 21 8 -2.0617 -5.9220 2.3478 22 6 -0.9719 -6.2468 4.5017 23 6 -1.8221 -7.3245 5.2209 24 6 -1.4629 -8.6171 4.4470 25 6 -1.3417 -8.1579 2.9792 26 1 -0.3633 0.4513 0.9233 27 1 -0.3633 0.5740 -0.8524 28 1 -0.3633 -1.0252 -0.0708 29 1 3.0827 1.3433 -0.0709 30 1 1.5898 1.9163 -0.8525 31 1 1.7043 1.8724 0.9232 32 1 1.5611 -0.3872 2.0628 33 1 3.0797 -0.6610 1.1756 34 1 2.0658 -2.6213 0.0452 35 1 0.5472 -2.3475 0.9323 36 1 1.7463 -2.6618 3.0803 37 1 3.2646 -2.9354 2.1925 38 1 2.1621 -6.1467 0.8014 39 1 3.2883 -4.7963 0.5256 40 1 6.1886 -8.0125 2.3569 41 1 0.2528 -6.6208 1.2836 42 1 1.0871 -6.9986 2.8099 43 1 -1.9277 -4.9643 2.3452 44 1 0.0561 -6.2681 4.8634 45 1 -1.4074 -5.2579 4.6450 46 1 -2.8852 -7.1019 5.1288 47 1 -1.5334 -7.4086 6.2686 48 1 -2.2564 -9.3571 4.5510 49 1 -0.5141 -9.0216 4.7996 50 1 -2.2813 -8.3324 2.4547 51 1 -0.5327 -8.6957 2.4849 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000073079021.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:37:16 Heat of formation + Delta-G solvation = -100.249819 kcal Electronic energy + Delta-G solvation = -27782.321556 eV Core-core repulsion = 24101.920471 eV Total energy + Delta-G solvation = -3680.401085 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 312.220 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -39.99226 -38.24341 -37.50494 -35.33835 -34.41037 -32.94140 -31.88253 -30.20200 -28.50560 -28.05517 -27.65922 -26.42741 -24.86462 -22.69173 -22.37361 -20.74603 -20.70434 -19.54161 -18.41767 -17.09725 -16.53255 -16.31260 -15.77982 -15.55909 -15.27151 -15.13510 -14.86461 -14.60225 -14.34832 -14.08922 -13.79192 -13.21824 -13.01451 -12.75009 -12.54304 -12.44733 -12.21413 -12.14350 -12.02041 -11.85358 -11.66555 -11.54152 -11.41908 -11.33691 -11.06682 -10.93356 -10.90151 -10.76493 -10.68464 -10.42999 -10.35207 -10.28103 -10.19574 -9.69225 -9.45438 -9.09620 -8.76238 -8.41829 -7.83725 -6.26281 -4.28590 3.15193 3.22916 3.23845 3.24992 3.66280 4.01225 4.22799 4.52408 4.83780 4.87619 5.00603 5.04863 5.08038 5.14384 5.20553 5.29488 5.31649 5.42254 5.49800 5.56693 5.59620 5.64153 5.70257 5.73403 5.73717 5.81969 5.85460 5.92353 5.92591 6.05897 6.08024 6.09531 6.20839 6.25523 6.28148 6.37349 6.41721 6.44291 6.51696 6.57274 6.65512 6.68102 6.96758 6.98912 7.26890 7.39068 8.01204 8.13969 8.34688 8.75917 8.84692 9.32923 10.86150 Molecular weight = 312.22amu Principal moments of inertia in cm(-1) A = 0.008094 B = 0.005326 C = 0.003523 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3458.611600 B = 5255.746605 C = 7946.470653 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 N -0.548 5.548 3 C 0.025 3.975 4 C 0.058 3.942 5 C -0.129 4.129 6 C 0.121 3.879 7 N -0.586 5.586 8 C 0.207 3.793 9 C -0.543 4.543 10 H 0.078 0.922 11 C 0.078 3.922 12 N -0.890 5.890 13 Si 0.870 3.130 14 H -0.273 1.273 15 H -0.283 1.283 16 H -0.264 1.264 17 C 0.523 3.477 18 O -0.575 6.575 19 C -0.165 4.165 20 C 0.149 3.851 21 O -0.566 6.566 22 C -0.136 4.136 23 C -0.125 4.125 24 C -0.124 4.124 25 C -0.114 4.114 26 H 0.024 0.976 27 H 0.064 0.936 28 H 0.072 0.928 29 H 0.068 0.932 30 H 0.065 0.935 31 H 0.023 0.977 32 H 0.035 0.965 33 H 0.076 0.924 34 H 0.070 0.930 35 H 0.064 0.936 36 H 0.073 0.927 37 H 0.079 0.921 38 H 0.035 0.965 39 H 0.030 0.970 40 H 0.267 0.733 41 H 0.092 0.908 42 H 0.115 0.885 43 H 0.381 0.619 44 H 0.069 0.931 45 H 0.080 0.920 46 H 0.064 0.936 47 H 0.062 0.938 48 H 0.063 0.937 49 H 0.068 0.932 50 H 0.074 0.926 51 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.377 7.090 -2.136 12.748 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.126 4.126 2 N -0.272 5.272 3 C -0.124 4.124 4 C -0.070 4.070 5 C -0.168 4.168 6 C -0.004 4.004 7 N -0.315 5.315 8 C 0.086 3.914 9 C -0.581 4.581 10 H 0.096 0.904 11 C -0.126 4.126 12 N -0.527 5.527 13 Si 0.697 3.303 14 H -0.199 1.199 15 H -0.208 1.208 16 H -0.188 1.188 17 C 0.312 3.688 18 O -0.457 6.457 19 C -0.205 4.205 20 C 0.108 3.892 21 O -0.375 6.375 22 C -0.174 4.174 23 C -0.162 4.162 24 C -0.161 4.161 25 C -0.151 4.151 26 H 0.043 0.957 27 H 0.082 0.918 28 H 0.091 0.909 29 H 0.087 0.913 30 H 0.084 0.916 31 H 0.042 0.958 32 H 0.053 0.947 33 H 0.094 0.906 34 H 0.089 0.911 35 H 0.082 0.918 36 H 0.092 0.908 37 H 0.097 0.903 38 H 0.053 0.947 39 H 0.048 0.952 40 H 0.077 0.923 41 H 0.111 0.889 42 H 0.133 0.867 43 H 0.232 0.768 44 H 0.088 0.912 45 H 0.098 0.902 46 H 0.083 0.917 47 H 0.081 0.919 48 H 0.082 0.918 49 H 0.087 0.913 50 H 0.093 0.907 51 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -10.636 6.520 -2.359 12.696 hybrid contribution 0.525 0.607 -0.192 0.825 sum -10.112 7.127 -2.551 12.631 Atomic orbital electron populations 1.22426 0.87479 1.02633 1.00070 1.61978 1.08054 1.13507 1.43688 1.22370 1.00816 0.88977 1.00193 1.22076 1.00177 0.93817 0.90919 1.21947 1.01606 0.93404 0.99806 1.21243 1.00519 0.80899 0.97691 1.47895 1.19962 1.09142 1.54465 1.19846 0.89468 0.89161 0.92954 1.21354 1.14333 1.26220 0.96174 0.90416 1.24869 0.94948 0.95315 0.97487 1.69891 1.18370 1.29901 1.34522 0.86937 0.79206 0.78462 0.85719 1.19855 1.20827 1.18816 1.20456 0.80835 0.89878 0.77614 1.90524 1.51224 1.59817 1.44168 1.22515 0.99261 0.95141 1.03553 1.21516 0.85202 0.91507 0.90978 1.86366 1.48184 1.23867 1.79114 1.22999 1.00514 0.99258 0.94597 1.22514 0.99887 0.95140 0.98707 1.22354 1.01428 0.97502 0.94827 1.22160 1.02610 0.92968 0.97392 0.95724 0.91756 0.90889 0.91338 0.91604 0.95837 0.94714 0.90581 0.91103 0.91772 0.90840 0.90253 0.94736 0.95157 0.92311 0.88948 0.86705 0.76828 0.91213 0.90170 0.91734 0.91947 0.91821 0.91301 0.90712 0.90618 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.25 9.32 60.07 0.56 0.81 16 2 N -0.55 -6.75 5.02 -251.27 -1.26 -8.01 16 3 C 0.02 0.25 9.57 60.07 0.57 0.82 16 4 C 0.06 0.75 4.96 -3.83 -0.02 0.73 16 5 C -0.13 -1.91 5.46 -26.73 -0.15 -2.06 16 6 C 0.12 2.07 5.41 -4.04 -0.02 2.04 16 7 N -0.59 -11.38 2.46 -175.05 -0.43 -11.81 16 8 C 0.21 4.43 4.03 -5.19 -0.02 4.41 16 9 C -0.54 -13.86 9.82 -34.44 -0.34 -14.20 16 10 H 0.08 2.23 8.06 -52.49 -0.42 1.81 16 11 C 0.08 2.05 5.47 -17.82 -0.10 1.95 16 12 N -0.89 -25.33 13.96 55.43 0.77 -24.56 16 13 Si 0.87 19.51 27.47 -169.99 -4.67 14.84 16 14 H -0.27 -6.08 7.11 56.52 0.40 -5.67 16 15 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 16 H -0.26 -5.58 6.54 56.52 0.37 -5.21 16 17 C 0.52 9.95 7.14 -10.98 -0.08 9.87 16 18 O -0.57 -11.19 12.08 -9.13 -0.11 -11.30 16 19 C -0.16 -2.89 3.18 -27.88 -0.09 -2.98 16 20 C 0.15 2.39 0.98 -89.50 -0.09 2.30 16 21 O -0.57 -9.45 12.89 -49.92 -0.64 -10.09 16 22 C -0.14 -2.16 4.65 -25.03 -0.12 -2.27 16 23 C -0.12 -1.67 6.91 -24.70 -0.17 -1.84 16 24 C -0.12 -1.57 6.83 -25.07 -0.17 -1.74 16 25 C -0.11 -1.61 6.27 -25.61 -0.16 -1.77 16 26 H 0.02 0.27 8.14 -51.93 -0.42 -0.16 16 27 H 0.06 0.62 8.12 -51.93 -0.42 0.20 16 28 H 0.07 0.87 6.47 -51.93 -0.34 0.53 16 29 H 0.07 0.65 8.12 -51.93 -0.42 0.22 16 30 H 0.07 0.58 8.12 -51.93 -0.42 0.15 16 31 H 0.02 0.22 8.14 -51.93 -0.42 -0.20 16 32 H 0.03 0.45 8.12 -51.93 -0.42 0.02 16 33 H 0.08 0.94 8.06 -51.93 -0.42 0.52 16 34 H 0.07 1.11 8.14 -51.93 -0.42 0.69 16 35 H 0.06 1.00 6.55 -51.92 -0.34 0.66 16 36 H 0.07 1.28 7.41 -51.93 -0.38 0.90 16 37 H 0.08 1.38 8.07 -51.93 -0.42 0.96 16 38 H 0.03 0.73 5.51 -51.93 -0.29 0.44 16 39 H 0.03 0.64 7.50 -51.93 -0.39 0.25 16 40 H 0.27 7.14 8.31 -40.82 -0.34 6.80 16 41 H 0.09 1.57 7.41 -51.93 -0.38 1.18 16 42 H 0.11 2.17 7.98 -51.93 -0.41 1.75 16 43 H 0.38 6.24 6.96 45.56 0.32 6.55 16 44 H 0.07 1.20 7.79 -51.93 -0.40 0.80 16 45 H 0.08 1.35 7.17 -51.93 -0.37 0.97 16 46 H 0.06 0.84 8.14 -51.93 -0.42 0.41 16 47 H 0.06 0.76 8.14 -51.93 -0.42 0.34 16 48 H 0.06 0.70 8.14 -51.93 -0.42 0.28 16 49 H 0.07 0.87 8.14 -51.93 -0.42 0.45 16 50 H 0.07 1.03 7.96 -51.92 -0.41 0.62 16 51 H 0.08 1.03 7.67 -51.93 -0.40 0.63 16 LS Contribution 392.99 15.07 5.92 5.92 Total: -1.00 -28.31 392.99 -9.68 -37.99 By element: Atomic # 1 Polarization: 19.83 SS G_CDS: -8.88 Total: 10.95 kcal Atomic # 6 Polarization: -3.54 SS G_CDS: -0.38 Total: -3.92 kcal Atomic # 7 Polarization: -43.46 SS G_CDS: -0.92 Total: -44.38 kcal Atomic # 8 Polarization: -20.64 SS G_CDS: -0.75 Total: -21.39 kcal Atomic # 14 Polarization: 19.51 SS G_CDS: -4.67 Total: 14.84 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -28.31 -9.68 -37.99 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000073079021.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.261 kcal (2) G-P(sol) polarization free energy of solvation -28.307 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.569 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.681 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.988 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.250 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds