Wall clock time and date at job start Tue Mar 31 2020 11:33:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17404 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 N 1.46496 * 109.46878 * 265.13947 * 3 2 1 5 5 C 1.36963 * 120.00215 * 263.90950 * 4 3 2 6 6 H 1.07997 * 120.00551 * 203.06716 * 5 4 3 7 7 C 1.38970 * 119.99558 * 23.07260 * 5 4 3 8 8 N 1.31422 * 120.00181 * 21.61900 * 7 5 4 9 9 Si 1.86805 * 119.99800 * 201.61297 * 7 5 4 10 10 H 1.48500 * 109.46553 * 90.00362 * 9 7 5 11 11 H 1.48502 * 109.47220 * 209.99678 * 9 7 5 12 12 H 1.48497 * 109.47043 * 330.00384 * 9 7 5 13 13 C 1.34778 * 120.00414 * 83.91661 * 4 3 2 14 14 O 1.21670 * 120.00535 * 174.41003 * 13 4 3 15 15 C 1.47060 * 119.99534 * 354.68056 * 13 4 3 16 16 N 1.33465 * 122.56418 * 357.29795 * 15 13 4 17 17 C 1.28849 * 115.89301 * 179.79396 * 16 15 13 18 18 S 1.75971 * 109.56658 * 0.44835 * 17 16 15 19 19 C 1.35304 * 122.56539 * 177.58671 * 15 13 4 20 20 Br 1.89099 * 125.48242 * 359.97438 * 19 15 13 21 21 H 4.40637 * 5.51395 * 179.97438 * 4 1 2 22 22 H 1.09000 * 109.46791 * 145.14151 * 3 2 1 23 23 H 1.08994 * 109.46911 * 25.13825 * 3 2 1 24 24 H 0.97004 * 119.99418 * 180.02562 * 8 7 5 25 25 H 1.08004 * 125.21618 * 180.19436 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 7 3.1343 0.1179 1.3762 5 6 3.4807 1.3444 1.8779 6 1 4.1663 1.4138 2.7094 7 6 2.9497 2.4996 1.3169 8 7 1.8339 2.4413 0.6250 9 14 3.8220 4.1355 1.5464 10 1 4.7896 4.3400 0.4386 11 1 2.8231 5.2343 1.5401 12 1 4.5466 4.1325 2.8425 13 6 3.2428 -0.9811 2.1488 14 8 3.7428 -0.9003 3.2551 15 6 2.7622 -2.2792 1.6522 16 7 2.1632 -2.4182 0.4676 17 6 1.7972 -3.6144 0.1591 18 16 2.2167 -4.7148 1.4666 19 6 2.8884 -3.4232 2.3637 20 35 3.6801 -3.5700 4.0747 21 1 -1.0500 0.0002 0.0000 22 1 3.0090 0.8441 -0.5874 23 1 3.0098 -0.9295 -0.4365 24 1 1.4635 3.2477 0.2331 25 1 1.3044 -3.8975 -0.7593 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491644329.mol2 25 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:33:39 Heat of formation + Delta-G solvation = 106.791433 kcal Electronic energy + Delta-G solvation = -16078.135097 eV Core-core repulsion = 13233.436299 eV Total energy + Delta-G solvation = -2844.698798 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 313.947 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -39.88034 -37.59516 -35.20191 -32.09044 -31.80511 -31.11846 -28.89605 -26.58888 -25.47624 -24.22999 -21.60455 -18.77102 -18.22903 -17.77841 -16.50970 -15.54902 -15.52845 -14.72005 -14.56529 -13.97574 -13.46481 -13.08039 -12.77266 -12.42922 -12.19491 -11.73456 -11.55057 -11.07984 -11.00876 -10.56883 -10.41517 -10.10059 -9.42961 -9.27907 -9.13380 -9.04390 -8.66251 -8.47614 -8.22365 -7.84560 -6.42295 -3.91993 0.63201 1.14158 1.73167 2.13844 2.52994 3.16037 3.21789 3.26641 3.88473 4.14083 4.23042 4.36609 4.46393 5.01505 5.04537 5.36413 5.69695 5.72764 6.12952 6.67021 6.78648 7.19625 7.45820 7.67500 8.01107 8.36285 9.03873 9.06633 9.24703 9.85521 10.54807 Molecular weight = 313.95amu Principal moments of inertia in cm(-1) A = 0.020327 B = 0.006337 C = 0.005023 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1377.177541 B = 4417.137322 C = 5572.971925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.281 4.281 2 C -0.077 4.077 3 C 0.232 3.768 4 N -0.407 5.407 5 C -0.309 4.309 6 H 0.109 0.891 7 C 0.035 3.965 8 N -0.839 5.839 9 Si 0.925 3.075 10 H -0.275 1.275 11 H -0.284 1.284 12 H -0.267 1.267 13 C 0.491 3.509 14 O -0.559 6.559 15 C 0.074 3.926 16 N -0.418 5.418 17 C 0.044 3.956 18 S 0.135 5.865 19 C -0.228 4.228 20 Br 0.047 6.953 21 H 0.193 0.807 22 H 0.090 0.910 23 H 0.089 0.911 24 H 0.272 0.728 25 H 0.207 0.793 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.140 -13.103 -1.946 13.248 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.300 4.300 2 C -0.078 4.078 3 C 0.109 3.891 4 N -0.123 5.123 5 C -0.437 4.437 6 H 0.126 0.874 7 C -0.173 4.173 8 N -0.474 5.474 9 Si 0.751 3.249 10 H -0.201 1.201 11 H -0.209 1.209 12 H -0.191 1.191 13 C 0.278 3.722 14 O -0.442 6.442 15 C -0.062 4.062 16 N -0.132 5.132 17 C -0.257 4.257 18 S 0.386 5.614 19 C -0.431 4.431 20 Br 0.130 6.870 21 H 0.210 0.790 22 H 0.108 0.892 23 H 0.106 0.894 24 H 0.082 0.918 25 H 0.224 0.776 Dipole moment (debyes) X Y Z Total from point charges 0.082 -13.550 -1.081 13.593 hybrid contribution -0.141 1.734 -0.170 1.748 sum -0.059 -11.816 -1.250 11.882 Atomic orbital electron populations 1.24021 0.95146 1.08351 1.02475 1.22700 0.93811 0.93438 0.97886 1.18508 0.85004 1.01058 0.84501 1.43655 1.52763 1.06101 1.09734 1.19782 1.25101 0.80691 1.18131 0.87376 1.25462 0.94727 1.00008 0.97103 1.70139 1.14886 1.30026 1.32343 0.85950 0.79104 0.80610 0.79282 1.20083 1.20922 1.19101 1.16887 0.87409 0.82324 0.85630 1.90736 1.49171 1.84386 1.19952 1.21006 0.99467 0.96379 0.89368 1.67678 1.10660 1.20185 1.14629 1.29599 1.03169 0.90274 1.02674 1.83634 1.53768 1.12167 1.11784 1.26601 1.14388 0.99290 1.02866 1.96658 1.79797 1.97267 1.13239 0.79024 0.89171 0.89384 0.91766 0.77634 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 31. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.28 -6.13 19.25 29.55 0.57 -5.56 15 2 C -0.08 -1.78 9.45 -37.12 -0.35 -2.14 15 3 C 0.23 5.39 4.76 -6.83 -0.03 5.36 15 4 N -0.41 -10.60 2.58 -119.29 -0.31 -10.90 15 5 C -0.31 -8.45 9.23 -14.99 -0.14 -8.59 15 6 H 0.11 3.07 7.44 -52.49 -0.39 2.68 15 7 C 0.03 0.89 4.81 -17.46 -0.08 0.81 15 8 N -0.84 -21.95 9.71 55.50 0.54 -21.41 15 9 Si 0.92 20.06 29.60 -169.99 -5.03 15.03 15 10 H -0.28 -5.82 7.11 56.52 0.40 -5.41 15 11 H -0.28 -6.12 7.11 56.52 0.40 -5.72 15 12 H -0.27 -5.84 7.11 56.52 0.40 -5.43 15 13 C 0.49 12.54 7.53 -12.68 -0.10 12.45 15 14 O -0.56 -15.35 14.14 5.22 0.07 -15.27 15 15 C 0.07 1.58 6.40 -84.63 -0.54 1.04 15 16 N -0.42 -7.72 5.48 -11.09 -0.06 -7.78 15 17 C 0.04 0.60 12.47 51.51 0.64 1.24 15 18 S 0.14 1.79 23.19 -107.50 -2.49 -0.71 15 19 C -0.23 -4.22 6.82 29.69 0.20 -4.02 15 20 Br 0.05 0.85 31.63 -68.01 -2.15 -1.30 15 21 H 0.19 3.51 7.80 -54.09 -0.42 3.09 15 22 H 0.09 2.15 6.84 -51.93 -0.36 1.79 15 23 H 0.09 1.85 5.75 -51.93 -0.30 1.55 15 24 H 0.27 6.75 8.31 -40.82 -0.34 6.41 15 25 H 0.21 1.84 8.06 -52.48 -0.42 1.41 15 LS Contribution 262.58 15.07 3.96 3.96 Total: -1.00 -31.10 262.58 -6.33 -37.43 By element: Atomic # 1 Polarization: 1.40 SS G_CDS: -1.02 Total: 0.37 kcal Atomic # 6 Polarization: 0.41 SS G_CDS: 0.17 Total: 0.58 kcal Atomic # 7 Polarization: -40.27 SS G_CDS: 0.17 Total: -40.10 kcal Atomic # 8 Polarization: -15.35 SS G_CDS: 0.07 Total: -15.27 kcal Atomic # 14 Polarization: 20.06 SS G_CDS: -5.03 Total: 15.03 kcal Atomic # 16 Polarization: 1.79 SS G_CDS: -2.49 Total: -0.71 kcal Atomic # 35 Polarization: 0.85 SS G_CDS: -2.15 Total: -1.30 kcal Total LS contribution 3.96 Total: 3.96 kcal Total: -31.10 -6.33 -37.43 kcal The number of atoms in the molecule is 25 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491644329.mol2 25 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 144.224 kcal (2) G-P(sol) polarization free energy of solvation -31.105 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 113.120 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.328 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.433 kcal (6) G-S(sol) free energy of system = (1) + (5) 106.791 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds