Wall clock time and date at job start Tue Mar 31 2020 10:09:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 N 1.46505 * 109.46836 * 2 1 4 4 C 1.46503 * 119.99706 * 90.94074 * 3 2 1 5 5 C 1.50707 * 109.46904 * 89.99793 * 4 3 2 6 6 H 1.07998 * 120.00213 * 0.02562 * 5 4 3 7 7 C 1.37879 * 119.99622 * 180.02562 * 5 4 3 8 8 N 1.31520 * 120.00024 * 0.02562 * 7 5 4 9 9 Si 1.86800 * 119.99797 * 180.02562 * 7 5 4 10 10 H 1.48501 * 109.46874 * 359.97438 * 9 7 5 11 11 H 1.48501 * 109.47011 * 119.99872 * 9 7 5 12 12 H 1.48503 * 109.46987 * 239.99916 * 9 7 5 13 13 C 1.34770 * 120.00076 * 270.94030 * 3 2 1 14 14 O 1.21700 * 119.99728 * 184.98142 * 13 3 2 15 15 C 1.46665 * 120.00413 * 4.98329 * 13 3 2 16 16 C 1.37887 * 126.22367 * 8.26385 * 15 13 3 17 17 C 1.39881 * 107.09502 * 180.02562 * 16 15 13 18 18 Br 1.89093 * 126.07635 * 180.02562 * 17 16 15 19 19 C 1.35505 * 107.84975 * 359.97438 * 17 16 15 20 20 N 1.35602 * 108.86022 * 359.73238 * 19 17 16 21 21 C 1.46501 * 125.67988 * 180.28444 * 20 19 17 22 22 H 1.08998 * 109.47454 * 292.93564 * 1 2 3 23 23 H 1.08998 * 109.47144 * 52.94004 * 1 2 3 24 24 H 1.09004 * 109.46842 * 172.93805 * 1 2 3 25 25 H 1.09001 * 109.47424 * 240.00275 * 2 1 3 26 26 H 1.08995 * 109.47497 * 120.00080 * 2 1 3 27 27 H 1.08990 * 109.47441 * 210.00032 * 4 3 2 28 28 H 1.09001 * 109.46923 * 330.00111 * 4 3 2 29 29 H 0.96998 * 119.99256 * 179.97438 * 8 7 5 30 30 H 1.07999 * 126.45142 * 0.02562 * 16 15 13 31 31 H 1.07998 * 125.57412 * 180.02562 * 19 17 16 32 32 H 1.08997 * 109.47298 * 264.47732 * 21 20 19 33 33 H 1.09002 * 109.46931 * 24.48129 * 21 20 19 34 34 H 1.09005 * 109.46503 * 144.48023 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 6 2.2820 2.0649 1.2686 5 6 3.7119 1.8258 1.6803 6 1 4.3595 1.2251 1.0589 7 6 4.1933 2.3739 2.8503 8 7 3.4045 3.1051 3.6072 9 14 5.9658 2.0781 3.3602 10 1 6.6378 1.2285 2.3444 11 1 6.6743 3.3790 3.4653 12 1 5.9941 1.3912 4.6765 13 6 2.2248 2.0230 -1.1670 14 8 2.7155 3.1367 -1.1704 15 6 1.8582 1.3793 -2.4328 16 6 1.1548 0.2019 -2.5744 17 6 1.0309 -0.0406 -3.9465 18 35 0.1576 -1.5172 -4.7419 19 6 1.6468 0.9713 -4.6044 20 7 2.1482 1.8439 -3.6956 21 6 2.8804 3.0743 -4.0060 22 1 -0.3634 0.4005 0.9464 23 1 -0.3633 0.6193 -0.8201 24 1 -0.3633 -1.0199 -0.1263 25 1 1.8934 -0.5138 -0.8900 26 1 1.8934 -0.5138 0.8899 27 1 2.1131 3.1347 1.1469 28 1 1.6130 1.6765 2.0366 29 1 3.7431 3.4903 4.4305 30 1 0.7717 -0.4167 -1.7763 31 1 1.7218 1.0695 -5.6773 32 1 3.9520 2.8778 -3.9724 33 1 2.6053 3.4191 -5.0028 34 1 2.6285 3.8415 -3.2737 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000037846329.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:09:55 Heat of formation + Delta-G solvation = 39.576834 kcal Electronic energy + Delta-G solvation = -18736.500417 eV Core-core repulsion = 15717.800293 eV Total energy + Delta-G solvation = -3018.700124 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 314.037 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.44620 -38.55704 -35.75481 -33.24260 -32.76583 -30.88080 -30.31630 -28.98598 -26.94001 -26.08946 -23.44471 -23.03764 -21.10242 -20.27435 -18.66762 -16.88703 -16.44151 -15.84995 -15.45427 -15.25999 -14.37077 -14.29121 -14.02697 -13.38009 -13.15719 -13.08646 -12.62913 -12.28879 -12.18674 -12.02847 -11.66184 -11.53165 -11.22520 -10.90948 -10.79935 -10.72762 -10.50133 -10.18782 -10.13032 -9.65106 -9.13238 -8.51949 -8.45578 -8.16573 -7.70346 -6.06407 -4.10837 1.69376 1.77685 2.48937 2.88334 3.28867 3.36350 3.40893 3.85725 3.97121 4.43720 4.81883 4.85786 5.00137 5.25705 5.28523 5.32727 5.38673 5.61602 5.63957 5.78833 5.81668 5.88371 6.12585 6.26224 6.53597 6.56869 6.86408 7.02504 7.15218 7.38260 7.49271 7.89918 8.19910 8.32630 8.84425 9.00124 9.54140 11.01724 Molecular weight = 314.04amu Principal moments of inertia in cm(-1) A = 0.023744 B = 0.003921 C = 0.003645 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1178.944847 B = 7139.577529 C = 7680.696127 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.084 3.916 3 N -0.577 5.577 4 C 0.249 3.751 5 C -0.525 4.525 6 H 0.058 0.942 7 C 0.061 3.939 8 N -0.895 5.895 9 Si 0.898 3.102 10 H -0.273 1.273 11 H -0.283 1.283 12 H -0.283 1.283 13 C 0.573 3.427 14 O -0.546 6.546 15 C -0.019 4.019 16 C -0.150 4.150 17 C -0.179 4.179 18 Br -0.041 7.041 19 C 0.039 3.961 20 N -0.404 5.404 21 C 0.067 3.933 22 H 0.063 0.937 23 H 0.062 0.938 24 H 0.065 0.935 25 H 0.087 0.913 26 H 0.085 0.915 27 H 0.044 0.956 28 H 0.037 0.963 29 H 0.263 0.737 30 H 0.182 0.818 31 H 0.173 0.827 32 H 0.078 0.922 33 H 0.082 0.918 34 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.335 -8.433 -17.660 20.899 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.239 4.239 2 C -0.040 4.040 3 N -0.307 5.307 4 C 0.130 3.870 5 C -0.563 4.563 6 H 0.077 0.923 7 C -0.141 4.141 8 N -0.534 5.534 9 Si 0.726 3.274 10 H -0.198 1.198 11 H -0.209 1.209 12 H -0.209 1.209 13 C 0.360 3.640 14 O -0.426 6.426 15 C -0.134 4.134 16 C -0.176 4.176 17 C -0.265 4.265 18 Br 0.043 6.957 19 C -0.100 4.100 20 N -0.077 5.077 21 C -0.074 4.074 22 H 0.083 0.917 23 H 0.081 0.919 24 H 0.084 0.916 25 H 0.104 0.896 26 H 0.103 0.897 27 H 0.062 0.938 28 H 0.054 0.946 29 H 0.072 0.928 30 H 0.199 0.801 31 H 0.190 0.810 32 H 0.097 0.903 33 H 0.101 0.899 34 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -7.186 -7.921 -17.777 20.746 hybrid contribution 1.180 0.158 0.438 1.269 sum -6.006 -7.762 -17.339 19.924 Atomic orbital electron populations 1.22403 0.96556 1.01869 1.03037 1.22097 0.93710 0.84280 1.03924 1.47965 1.62627 1.13162 1.06953 1.19351 0.96452 0.93627 0.77591 1.21458 0.96496 1.32134 1.06258 0.92335 1.24925 0.97940 0.94904 0.96286 1.69943 1.35692 1.33812 1.13947 0.86441 0.84660 0.78034 0.78286 1.19807 1.20900 1.20925 1.16858 0.79511 0.85342 0.82271 1.90758 1.45032 1.19927 1.86892 1.20600 1.08613 0.98078 0.86085 1.22502 1.02548 0.97038 0.95514 1.20948 1.12033 0.98154 0.95365 1.96543 1.77821 1.39624 1.81694 1.21742 1.01779 0.91203 0.95269 1.43930 1.40310 1.18539 1.04888 1.22329 0.96962 0.84968 1.03118 0.91746 0.91896 0.91640 0.89555 0.89704 0.93833 0.94550 0.92756 0.80104 0.81005 0.90304 0.89940 0.87392 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.49 8.56 37.16 0.32 -2.17 16 2 C 0.08 1.38 5.58 -4.04 -0.02 1.36 16 3 N -0.58 -12.33 2.46 -176.61 -0.43 -12.77 16 4 C 0.25 6.42 5.12 -5.19 -0.03 6.39 16 5 C -0.52 -14.77 9.39 -34.44 -0.32 -15.09 16 6 H 0.06 1.67 7.81 -52.49 -0.41 1.26 16 7 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 8 N -0.89 -26.32 13.29 55.43 0.74 -25.58 16 9 Si 0.90 21.77 29.54 -169.99 -5.02 16.75 16 10 H -0.27 -6.57 7.11 56.52 0.40 -6.17 16 11 H -0.28 -6.85 7.11 56.52 0.40 -6.45 16 12 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 13 C 0.57 12.27 7.62 -12.86 -0.10 12.17 16 14 O -0.55 -13.41 14.41 5.19 0.07 -13.33 16 15 C -0.02 -0.33 6.72 -81.98 -0.55 -0.88 16 16 C -0.15 -2.25 7.48 -39.10 -0.29 -2.54 16 17 C -0.18 -2.39 6.53 -39.94 -0.26 -2.65 16 18 Br -0.04 -0.46 34.08 -68.01 -2.32 -2.77 16 19 C 0.04 0.48 11.33 -16.86 -0.19 0.29 16 20 N -0.40 -5.90 3.16 -120.20 -0.38 -6.28 16 21 C 0.07 0.82 10.52 59.85 0.63 1.45 16 22 H 0.06 0.94 8.14 -51.93 -0.42 0.51 16 23 H 0.06 0.89 6.60 -51.93 -0.34 0.55 16 24 H 0.06 0.71 8.12 -51.93 -0.42 0.29 16 25 H 0.09 1.31 4.80 -51.93 -0.25 1.06 16 26 H 0.08 1.43 8.06 -51.93 -0.42 1.01 16 27 H 0.04 1.26 7.49 -51.93 -0.39 0.87 16 28 H 0.04 0.94 8.07 -51.93 -0.42 0.52 16 29 H 0.26 7.28 8.31 -40.82 -0.34 6.94 16 30 H 0.18 2.49 3.16 -52.49 -0.17 2.32 16 31 H 0.17 1.53 8.06 -52.49 -0.42 1.11 16 32 H 0.08 0.94 8.14 -51.93 -0.42 0.52 16 33 H 0.08 0.69 8.12 -51.93 -0.42 0.27 16 34 H 0.11 1.58 6.50 -51.93 -0.34 1.25 16 LS Contribution 303.97 15.07 4.58 4.58 Total: -1.00 -32.21 303.97 -7.66 -39.86 By element: Atomic # 1 Polarization: 3.55 SS G_CDS: -3.98 Total: -0.43 kcal Atomic # 6 Polarization: 0.89 SS G_CDS: -0.91 Total: -0.02 kcal Atomic # 7 Polarization: -44.55 SS G_CDS: -0.08 Total: -44.63 kcal Atomic # 8 Polarization: -13.41 SS G_CDS: 0.07 Total: -13.33 kcal Atomic # 14 Polarization: 21.77 SS G_CDS: -5.02 Total: 16.75 kcal Atomic # 35 Polarization: -0.46 SS G_CDS: -2.32 Total: -2.77 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -32.21 -7.66 -39.86 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000037846329.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.439 kcal (2) G-P(sol) polarization free energy of solvation -32.207 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.232 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.655 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.862 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.577 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds