Wall clock time and date at job start Tue Mar 31 2020 10:59:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.46504 * 119.99574 * 2 1 4 4 C 1.50695 * 109.47348 * 270.00614 * 3 2 1 5 5 H 1.07995 * 119.99999 * 359.97438 * 4 3 2 6 6 C 1.37880 * 119.99705 * 180.02562 * 4 3 2 7 7 N 1.31505 * 120.00266 * 359.97438 * 6 4 3 8 8 Si 1.86800 * 119.99593 * 179.97438 * 6 4 3 9 9 H 1.48494 * 109.47349 * 89.99561 * 8 6 4 10 10 H 1.48505 * 109.46796 * 209.99508 * 8 6 4 11 11 H 1.48497 * 109.47217 * 329.99391 * 8 6 4 12 12 C 1.34773 * 120.00366 * 180.02562 * 2 1 3 13 13 O 1.21356 * 120.00059 * 174.34295 * 12 2 1 14 14 C 1.49351 * 119.99773 * 354.34320 * 12 2 1 15 15 O 1.21378 * 120.00212 * 359.86544 * 14 12 2 16 16 N 1.34779 * 119.99704 * 179.86749 * 14 12 2 17 17 C 1.39727 * 119.99653 * 185.11573 * 16 14 12 18 18 C 1.38920 * 120.05518 * 324.58408 * 17 16 14 19 19 C 1.38308 * 119.92149 * 180.02562 * 18 17 16 20 20 F 1.35096 * 119.97568 * 179.97438 * 19 18 17 21 21 C 1.38516 * 120.03806 * 359.97438 * 19 18 17 22 22 C 1.38354 * 120.11765 * 0.02562 * 21 19 18 23 23 Cl 1.73602 * 119.96299 * 179.97438 * 22 21 19 24 24 C 1.38246 * 120.07209 * 0.02562 * 22 21 19 25 25 H 1.09007 * 109.46417 * 264.05591 * 1 2 3 26 26 H 1.08988 * 109.47466 * 24.05511 * 1 2 3 27 27 H 1.08999 * 109.46705 * 144.06065 * 1 2 3 28 28 H 1.09004 * 109.47107 * 30.00732 * 3 2 1 29 29 H 1.08996 * 109.46864 * 150.00275 * 3 2 1 30 30 H 0.97002 * 119.99962 * 180.02562 * 7 6 4 31 31 H 0.97001 * 120.00514 * 5.11123 * 16 14 12 32 32 H 1.07993 * 120.03989 * 0.02646 * 18 17 16 33 33 H 1.08006 * 119.94362 * 180.28102 * 21 19 18 34 34 H 1.08003 * 120.01977 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.4485 1.7040 -1.4207 5 1 2.0980 1.0961 -2.2416 6 6 3.1267 2.8778 -1.6726 7 7 3.5540 3.6178 -0.6730 8 14 3.4384 3.4168 -3.4337 9 1 2.3088 4.2599 -3.9007 10 1 4.6990 4.1995 -3.4960 11 1 3.5556 2.2196 -4.3045 12 6 2.1390 -1.1671 -0.0005 13 8 3.3481 -1.1696 -0.1041 14 6 1.3977 -2.4575 0.1264 15 8 0.1886 -2.4549 0.2325 16 7 2.0715 -3.6248 0.1232 17 6 1.3727 -4.8347 0.1341 18 6 0.1833 -4.9449 0.8434 19 6 -0.5058 -6.1440 0.8527 20 9 -1.6623 -6.2525 1.5425 21 6 -0.0110 -7.2336 0.1552 22 6 1.1734 -7.1256 -0.5517 23 17 1.7904 -8.4940 -1.4240 24 6 1.8667 -5.9296 -0.5634 25 1 -0.3632 -0.1064 1.0222 26 1 -0.3634 0.9383 -0.4188 27 1 -0.3633 -0.8321 -0.6032 28 1 1.6084 2.0284 0.5140 29 1 3.1499 1.1385 0.5138 30 1 4.0307 4.4437 -0.8502 31 1 3.0414 -3.6250 0.1132 32 1 -0.2027 -4.0953 1.3868 33 1 -0.5527 -8.1680 0.1598 34 1 2.7914 -5.8464 -1.1152 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000283444784.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:59:59 Heat of formation + Delta-G solvation = -77.414802 kcal Electronic energy + Delta-G solvation = -22913.942411 eV Core-core repulsion = 18981.136530 eV Total energy + Delta-G solvation = -3932.805881 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 314.062 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -49.21784 -41.08416 -39.36143 -37.99990 -36.89287 -35.66518 -34.47826 -32.64996 -30.85220 -30.19569 -28.14083 -26.38262 -24.89930 -23.52300 -23.03833 -21.66500 -19.81303 -18.54538 -17.49986 -16.94765 -16.69962 -16.59916 -16.33531 -15.94249 -15.67050 -15.45004 -15.06898 -14.76982 -14.44227 -13.98430 -13.68589 -13.48464 -13.23885 -12.60429 -12.52037 -12.36032 -12.18609 -11.90924 -11.87544 -11.46357 -11.36836 -11.03640 -10.89912 -10.67058 -10.48901 -10.26106 -9.75336 -9.14564 -8.94423 -8.67984 -8.53811 -7.91224 -6.15194 -4.20779 0.56276 0.63936 1.55067 1.69586 2.45944 3.04753 3.25512 3.32096 3.36229 3.54037 3.76442 3.95475 4.35966 4.54130 4.55670 4.60730 4.70514 4.86473 5.16529 5.19922 5.57531 5.65577 5.75845 5.82049 5.91864 6.03599 6.34757 6.45996 6.68540 6.94030 7.17734 7.26360 7.63648 7.80385 8.05254 8.07660 8.49083 8.83256 9.44567 10.93087 Molecular weight = 314.06amu Principal moments of inertia in cm(-1) A = 0.021167 B = 0.002925 C = 0.002694 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1322.502484 B = 9569.210819 C =10390.906544 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.560 5.560 3 C 0.243 3.757 4 C -0.531 4.531 5 H 0.060 0.940 6 C 0.063 3.937 7 N -0.893 5.893 8 Si 0.901 3.099 9 H -0.279 1.279 10 H -0.284 1.284 11 H -0.273 1.273 12 C 0.495 3.505 13 O -0.519 6.519 14 C 0.511 3.489 15 O -0.496 6.496 16 N -0.651 5.651 17 C 0.195 3.805 18 C -0.155 4.155 19 C 0.134 3.866 20 F -0.128 7.128 21 C -0.165 4.165 22 C 0.012 3.988 23 Cl -0.053 7.053 24 C -0.146 4.146 25 H 0.051 0.949 26 H 0.073 0.927 27 H 0.081 0.919 28 H 0.042 0.958 29 H 0.047 0.953 30 H 0.265 0.735 31 H 0.429 0.571 32 H 0.161 0.839 33 H 0.147 0.853 34 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.153 -21.047 2.655 22.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 N -0.291 5.291 3 C 0.124 3.876 4 C -0.570 4.570 5 H 0.078 0.922 6 C -0.140 4.140 7 N -0.532 5.532 8 Si 0.729 3.271 9 H -0.205 1.205 10 H -0.210 1.210 11 H -0.198 1.198 12 C 0.275 3.725 13 O -0.396 6.396 14 C 0.295 3.705 15 O -0.370 6.370 16 N -0.298 5.298 17 C 0.099 3.901 18 C -0.176 4.176 19 C 0.114 3.886 20 F -0.107 7.107 21 C -0.186 4.186 22 C -0.016 4.016 23 Cl -0.024 7.024 24 C -0.167 4.167 25 H 0.070 0.930 26 H 0.091 0.909 27 H 0.100 0.900 28 H 0.060 0.940 29 H 0.065 0.935 30 H 0.075 0.925 31 H 0.268 0.732 32 H 0.178 0.822 33 H 0.165 0.835 34 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -6.256 -20.840 2.658 21.921 hybrid contribution 0.438 0.244 -0.948 1.073 sum -5.817 -20.596 1.710 21.470 Atomic orbital electron populations 1.22071 0.79380 1.03480 1.01687 1.48153 1.07677 1.06714 1.66545 1.19549 0.92621 0.77194 0.98208 1.21362 1.37090 1.06646 0.91873 0.92198 1.24928 0.95103 0.96217 0.97706 1.69919 1.38063 1.14312 1.30870 0.86442 0.77758 0.78660 0.84270 1.20516 1.20990 1.19806 1.19399 0.87536 0.84180 0.81431 1.90763 1.13230 1.86328 1.49277 1.21147 0.87761 0.85652 0.75946 1.90697 1.13936 1.86978 1.45354 1.43275 1.11813 1.02924 1.71836 1.17188 0.92783 0.85492 0.94615 1.21387 0.96376 0.98149 1.01695 1.17138 0.83560 0.93679 0.94217 1.91544 1.45711 1.96536 1.76879 1.20921 0.97086 0.99788 1.00765 1.20172 0.94827 0.89223 0.97383 1.98397 1.86870 1.42467 1.74658 1.20863 1.02945 0.91205 1.01706 0.92995 0.90874 0.90023 0.94007 0.93458 0.92514 0.73223 0.82191 0.83533 0.83486 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.31 9.27 59.85 0.55 1.87 16 2 N -0.56 -11.66 2.86 -183.50 -0.52 -12.18 16 3 C 0.24 6.07 5.09 -5.19 -0.03 6.04 16 4 C -0.53 -14.55 9.39 -34.44 -0.32 -14.87 16 5 H 0.06 1.65 7.81 -52.49 -0.41 1.24 16 6 C 0.06 1.74 5.46 -17.82 -0.10 1.65 16 7 N -0.89 -25.64 13.29 55.43 0.74 -24.90 16 8 Si 0.90 21.25 29.54 -169.99 -5.02 16.23 16 9 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 10 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 11 H -0.27 -6.43 7.11 56.52 0.40 -6.03 16 12 C 0.49 9.74 7.72 -11.63 -0.09 9.65 16 13 O -0.52 -11.54 16.12 5.49 0.09 -11.46 16 14 C 0.51 8.04 7.61 -11.63 -0.09 7.95 16 15 O -0.50 -7.98 10.71 5.47 0.06 -7.92 16 16 N -0.65 -8.16 5.32 -10.30 -0.05 -8.21 16 17 C 0.20 2.21 6.29 -83.76 -0.53 1.69 16 18 C -0.15 -1.82 8.67 -39.30 -0.34 -2.16 16 19 C 0.13 1.44 7.30 -39.45 -0.29 1.15 16 20 F -0.13 -1.44 17.27 2.25 0.04 -1.40 16 21 C -0.17 -1.51 9.80 -39.44 -0.39 -1.90 16 22 C 0.01 0.11 6.32 -39.54 -0.25 -0.14 16 23 Cl -0.05 -0.44 28.95 -51.86 -1.50 -1.94 16 24 C -0.15 -1.40 9.75 -39.33 -0.38 -1.78 16 25 H 0.05 0.80 8.13 -51.93 -0.42 0.37 16 26 H 0.07 1.24 8.03 -51.94 -0.42 0.82 16 27 H 0.08 1.34 5.84 -51.93 -0.30 1.04 16 28 H 0.04 1.05 8.07 -51.93 -0.42 0.63 16 29 H 0.05 1.30 7.51 -51.93 -0.39 0.91 16 30 H 0.27 7.18 8.31 -40.82 -0.34 6.85 16 31 H 0.43 4.74 8.30 -40.82 -0.34 4.40 16 32 H 0.16 2.06 6.23 -52.49 -0.33 1.73 16 33 H 0.15 1.06 8.06 -52.48 -0.42 0.64 16 34 H 0.15 1.17 8.06 -52.48 -0.42 0.74 16 LS Contribution 322.36 15.07 4.86 4.86 Total: -1.00 -30.11 322.36 -6.57 -36.69 By element: Atomic # 1 Polarization: 4.10 SS G_CDS: -3.01 Total: 1.09 kcal Atomic # 6 Polarization: 11.38 SS G_CDS: -2.25 Total: 9.14 kcal Atomic # 7 Polarization: -45.45 SS G_CDS: 0.16 Total: -45.29 kcal Atomic # 8 Polarization: -19.52 SS G_CDS: 0.15 Total: -19.37 kcal Atomic # 9 Polarization: -1.44 SS G_CDS: 0.04 Total: -1.40 kcal Atomic # 14 Polarization: 21.25 SS G_CDS: -5.02 Total: 16.23 kcal Atomic # 17 Polarization: -0.44 SS G_CDS: -1.50 Total: -1.94 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -30.11 -6.57 -36.69 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000283444784.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.730 kcal (2) G-P(sol) polarization free energy of solvation -30.111 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.840 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.574 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.685 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.415 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds