Wall clock time and date at job start Tue Mar 31 2020 10:54:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17399 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 N 1.46495 * 109.47503 * 331.64224 * 3 2 1 5 5 C 1.36816 * 119.99385 * 95.59137 * 4 3 2 6 6 H 1.08004 * 119.99676 * 152.69447 * 5 4 3 7 7 C 1.39070 * 120.00243 * 332.41165 * 5 4 3 8 8 N 1.31350 * 120.00450 * 4.31252 * 7 5 4 9 9 Si 1.86802 * 120.00078 * 184.30948 * 7 5 4 10 10 H 1.48505 * 109.47139 * 60.00291 * 9 7 5 11 11 H 1.48499 * 109.47439 * 180.02562 * 9 7 5 12 12 H 1.48496 * 109.47195 * 300.00563 * 9 7 5 13 13 C 1.34776 * 120.00344 * 275.59655 * 4 3 2 14 14 O 1.21645 * 119.99670 * 354.62452 * 13 4 3 15 15 C 1.47282 * 119.99940 * 174.63118 * 13 4 3 16 16 C 1.38835 * 120.33298 * 317.70214 * 15 13 4 17 17 C 1.38945 * 120.70561 * 180.02562 * 16 15 13 18 18 Cl 1.73594 * 119.48538 * 179.97438 * 17 16 15 19 19 C 1.36485 * 121.03388 * 359.97438 * 17 16 15 20 20 C 1.40431 * 120.09483 * 0.02562 * 19 17 16 21 21 C 1.40811 * 121.24302 * 179.97438 * 20 19 17 22 22 C 1.36638 * 118.15205 * 179.97438 * 21 20 19 23 23 C 1.39221 * 119.90624 * 359.97438 * 22 21 20 24 24 N 1.31241 * 121.69413 * 0.02562 * 23 22 21 25 25 C 1.33330 * 121.35660 * 359.72776 * 24 23 22 26 26 H 4.40638 * 5.51360 * 179.97438 * 4 1 2 27 27 H 1.09001 * 109.46451 * 211.64341 * 3 2 1 28 28 H 1.09003 * 109.46824 * 91.64599 * 3 2 1 29 29 H 0.96992 * 120.00112 * 179.97438 * 8 7 5 30 30 H 1.07998 * 119.64661 * 0.02562 * 16 15 13 31 31 H 1.08003 * 119.94971 * 180.02562 * 19 17 16 32 32 H 1.07997 * 120.92567 * 0.02562 * 21 20 19 33 33 H 1.08000 * 120.04697 * 180.02562 * 22 21 20 34 34 H 1.08001 * 119.15243 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1350 -1.2145 0.6560 5 6 3.4723 -2.3081 -0.0938 6 1 4.2100 -3.0069 0.2721 7 6 2.8611 -2.5229 -1.3244 8 7 2.0231 -1.6334 -1.8058 9 14 3.2319 -4.0767 -2.2928 10 1 2.8473 -5.2646 -1.4890 11 1 2.4597 -4.0656 -3.5612 12 1 4.6839 -4.1348 -2.5984 13 6 3.2524 -1.2553 1.9980 14 8 3.0464 -0.2539 2.6572 15 6 3.6301 -2.5122 2.6663 16 6 3.0735 -3.7173 2.2596 17 6 3.4239 -4.9076 2.8850 18 17 2.7080 -6.3962 2.3512 19 6 4.3222 -4.9247 3.9124 20 6 4.9088 -3.7280 4.3549 21 6 5.8379 -3.7176 5.4130 22 6 6.3700 -2.5175 5.7920 23 6 5.9891 -1.3508 5.1347 24 7 5.1228 -1.3661 4.1490 25 6 4.5707 -2.5044 3.7281 26 1 -1.0498 -0.0002 0.0003 27 1 3.0088 0.8757 0.5392 28 1 3.0093 0.0303 -1.0273 29 1 1.5971 -1.7831 -2.6642 30 1 2.3606 -3.7297 1.4485 31 1 4.5823 -5.8600 4.3857 32 1 6.1226 -4.6328 5.9107 33 1 7.0856 -2.4741 6.5996 34 1 6.4171 -0.4088 5.4444 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000490961481.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:54:01 Heat of formation + Delta-G solvation = 90.574665 kcal Electronic energy + Delta-G solvation = -23136.420465 eV Core-core repulsion = 19641.668379 eV Total energy + Delta-G solvation = -3494.752086 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 314.056 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -40.68273 -38.58302 -37.17874 -35.72044 -35.11164 -33.22281 -31.92013 -31.46277 -30.21653 -29.75775 -26.53607 -25.06535 -24.06569 -23.28017 -22.41360 -19.49140 -18.23693 -18.08446 -17.11385 -16.72400 -16.27095 -15.86832 -14.85027 -14.49294 -14.47834 -14.29575 -13.99227 -13.66396 -13.50561 -12.95160 -12.81222 -12.66236 -12.13528 -12.09890 -11.97838 -11.44612 -11.35629 -11.16748 -10.87021 -10.77106 -10.63735 -10.53343 -10.27109 -9.48275 -9.31426 -9.19627 -8.68716 -8.50565 -8.43286 -7.91801 -7.89767 -6.43382 -4.09189 0.41617 0.96956 2.03978 2.25157 2.94522 3.09617 3.15932 3.17349 3.78251 3.88358 4.07468 4.29209 4.38244 4.55862 4.61894 4.81945 4.92571 4.98058 5.05948 5.20841 5.23692 5.46541 5.65542 5.74739 5.93500 6.00164 6.11473 6.20805 6.42192 6.48970 6.64620 6.76760 6.95740 7.01252 7.20925 7.28055 7.64019 8.22195 8.28458 8.93458 8.98955 9.34911 9.77218 10.53326 Molecular weight = 314.06amu Principal moments of inertia in cm(-1) A = 0.011697 B = 0.006465 C = 0.004806 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2393.172360 B = 4330.033544 C = 5824.680117 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.282 4.282 2 C -0.092 4.092 3 C 0.240 3.760 4 N -0.431 5.431 5 C -0.341 4.341 6 H 0.097 0.903 7 C 0.044 3.956 8 N -0.855 5.855 9 Si 0.913 3.087 10 H -0.266 1.266 11 H -0.281 1.281 12 H -0.271 1.271 13 C 0.507 3.493 14 O -0.570 6.570 15 C -0.042 4.042 16 C -0.055 4.055 17 C -0.027 4.027 18 Cl -0.071 7.071 19 C -0.095 4.095 20 C -0.100 4.100 21 C -0.061 4.061 22 C -0.177 4.177 23 C 0.121 3.879 24 N -0.436 5.436 25 C 0.152 3.848 26 H 0.197 0.803 27 H 0.064 0.936 28 H 0.118 0.882 29 H 0.273 0.727 30 H 0.160 0.840 31 H 0.136 0.864 32 H 0.137 0.863 33 H 0.135 0.865 34 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.747 -6.749 8.831 12.512 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.301 4.301 2 C -0.093 4.093 3 C 0.118 3.882 4 N -0.148 5.148 5 C -0.468 4.468 6 H 0.115 0.885 7 C -0.162 4.162 8 N -0.491 5.491 9 Si 0.739 3.261 10 H -0.190 1.190 11 H -0.206 1.206 12 H -0.196 1.196 13 C 0.295 3.705 14 O -0.454 6.454 15 C -0.046 4.046 16 C -0.076 4.076 17 C -0.054 4.054 18 Cl -0.042 7.042 19 C -0.115 4.115 20 C -0.102 4.102 21 C -0.087 4.087 22 C -0.197 4.197 23 C -0.052 4.052 24 N -0.143 5.143 25 C 0.029 3.971 26 H 0.214 0.786 27 H 0.082 0.918 28 H 0.136 0.864 29 H 0.084 0.916 30 H 0.178 0.822 31 H 0.154 0.846 32 H 0.155 0.845 33 H 0.152 0.848 34 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 5.154 -5.577 8.361 11.295 hybrid contribution 0.074 -1.943 -0.326 1.971 sum 5.228 -7.520 8.036 12.184 Atomic orbital electron populations 1.24184 0.95329 1.04200 1.06409 1.23172 0.94320 0.96577 0.95239 1.18213 0.84017 0.86574 0.99430 1.43485 1.55343 1.12596 1.03416 1.19601 1.22618 1.02810 1.01793 0.88518 1.25398 0.94825 0.98345 0.97661 1.69915 1.26591 1.33280 1.19286 0.86177 0.78814 0.81979 0.79136 1.19040 1.20630 1.19646 1.17616 0.83269 0.87166 0.82415 1.90690 1.55502 1.34688 1.64514 1.19951 0.95348 0.94725 0.94608 1.21595 0.99073 0.88740 0.98187 1.20556 0.98983 0.87781 0.98032 1.98360 1.82846 1.33157 1.89866 1.20783 0.96716 0.97625 0.96416 1.18573 0.99618 0.93766 0.98281 1.21338 0.94112 0.98730 0.94523 1.21858 1.02151 0.93694 1.02004 1.23060 0.92700 0.98223 0.91200 1.68157 1.06668 1.27778 1.11689 1.18773 0.95344 0.88112 0.94823 0.78604 0.91760 0.86418 0.91551 0.82206 0.84584 0.84548 0.84762 0.82613 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.28 -6.40 19.25 29.55 0.57 -5.83 16 2 C -0.09 -2.26 11.46 -37.12 -0.43 -2.68 16 3 C 0.24 5.87 5.11 -6.83 -0.03 5.84 16 4 N -0.43 -10.84 2.59 -119.22 -0.31 -11.15 16 5 C -0.34 -8.33 7.08 -15.02 -0.11 -8.43 16 6 H 0.10 2.31 6.36 -52.48 -0.33 1.97 16 7 C 0.04 1.07 5.35 -17.45 -0.09 0.97 16 8 N -0.85 -21.30 8.76 55.50 0.49 -20.82 16 9 Si 0.91 18.92 29.56 -169.99 -5.02 13.89 16 10 H -0.27 -5.43 7.11 56.52 0.40 -5.03 16 11 H -0.28 -5.85 7.11 56.52 0.40 -5.45 16 12 H -0.27 -5.58 7.11 56.52 0.40 -5.18 16 13 C 0.51 12.79 6.98 -12.58 -0.09 12.70 16 14 O -0.57 -15.70 15.90 5.24 0.08 -15.62 16 15 C -0.04 -0.93 5.10 -104.62 -0.53 -1.46 16 16 C -0.05 -1.09 7.59 -39.10 -0.30 -1.38 16 17 C -0.03 -0.45 6.27 -39.95 -0.25 -0.70 16 18 Cl -0.07 -1.07 28.91 -51.86 -1.50 -2.57 16 19 C -0.10 -1.39 9.49 -39.39 -0.37 -1.76 16 20 C -0.10 -1.58 5.74 -106.83 -0.61 -2.19 16 21 C -0.06 -0.74 9.89 -39.19 -0.39 -1.12 16 22 C -0.18 -2.03 10.03 -39.79 -0.40 -2.43 16 23 C 0.12 1.76 11.15 -17.44 -0.19 1.57 16 24 N -0.44 -8.65 9.19 -10.75 -0.10 -8.75 16 25 C 0.15 3.03 6.59 -84.56 -0.56 2.47 16 26 H 0.20 3.64 7.80 -54.10 -0.42 3.22 16 27 H 0.06 1.54 7.52 -51.93 -0.39 1.15 16 28 H 0.12 2.90 6.39 -51.93 -0.33 2.57 16 29 H 0.27 6.58 8.31 -40.82 -0.34 6.25 16 30 H 0.16 3.40 6.76 -52.49 -0.35 3.05 16 31 H 0.14 1.51 8.06 -52.48 -0.42 1.09 16 32 H 0.14 1.15 8.06 -52.49 -0.42 0.73 16 33 H 0.13 1.02 8.06 -52.49 -0.42 0.60 16 34 H 0.16 1.77 8.06 -52.49 -0.42 1.34 16 LS Contribution 318.66 15.07 4.80 4.80 Total: -1.00 -30.33 318.66 -8.00 -38.34 By element: Atomic # 1 Polarization: 8.97 SS G_CDS: -2.66 Total: 6.31 kcal Atomic # 6 Polarization: -0.66 SS G_CDS: -3.78 Total: -4.44 kcal Atomic # 7 Polarization: -40.79 SS G_CDS: 0.08 Total: -40.71 kcal Atomic # 8 Polarization: -15.70 SS G_CDS: 0.08 Total: -15.62 kcal Atomic # 14 Polarization: 18.92 SS G_CDS: -5.02 Total: 13.89 kcal Atomic # 17 Polarization: -1.07 SS G_CDS: -1.50 Total: -2.57 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -30.33 -8.00 -38.34 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000490961481.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.912 kcal (2) G-P(sol) polarization free energy of solvation -30.334 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 98.577 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.003 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.337 kcal (6) G-S(sol) free energy of system = (1) + (5) 90.575 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds