Wall clock time and date at job start Tue Mar 31 2020 10:11:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35696 * 116.99888 * 2 1 4 4 C 1.38623 * 119.63602 * 180.02562 * 3 2 1 5 5 C 1.39181 * 119.02950 * 179.70228 * 4 3 2 6 6 N 1.39230 * 120.83587 * 180.27079 * 5 4 3 7 7 C 1.46501 * 120.00018 * 0.24423 * 6 5 4 8 8 C 1.52999 * 109.47233 * 180.02562 * 7 6 5 9 9 C 1.53001 * 109.47048 * 179.97438 * 8 7 6 10 10 C 1.50700 * 109.47046 * 179.97438 * 9 8 7 11 11 H 1.08003 * 119.99756 * 0.02562 * 10 9 8 12 12 C 1.37875 * 120.00297 * 180.02562 * 10 9 8 13 13 N 1.31514 * 119.99608 * 359.97438 * 12 10 9 14 14 Si 1.86797 * 120.00399 * 180.02562 * 12 10 9 15 15 H 1.48499 * 109.47374 * 59.99413 * 14 12 10 16 16 H 1.48496 * 109.47393 * 179.97438 * 14 12 10 17 17 H 1.48504 * 109.46822 * 299.99932 * 14 12 10 18 18 C 1.39703 * 118.32826 * 0.50440 * 5 4 3 19 19 Br 1.89100 * 120.41136 * 179.78552 * 18 5 4 20 20 C 1.37813 * 119.17926 * 359.51401 * 18 5 4 21 21 N 1.32103 * 120.90164 * 0.22814 * 20 18 5 22 22 H 1.09000 * 109.47382 * 60.00678 * 1 2 3 23 23 H 1.09005 * 109.47220 * 180.02562 * 1 2 3 24 24 H 1.09004 * 109.47448 * 300.00264 * 1 2 3 25 25 H 1.07996 * 120.48216 * 359.97438 * 4 3 2 26 26 H 0.96994 * 119.99865 * 180.23623 * 6 5 4 27 27 H 1.09001 * 109.47147 * 300.00061 * 7 6 5 28 28 H 1.09004 * 109.47577 * 59.99722 * 7 6 5 29 29 H 1.08996 * 109.46819 * 299.99696 * 8 7 6 30 30 H 1.08998 * 109.46848 * 59.99757 * 8 7 6 31 31 H 1.08996 * 109.47259 * 299.99667 * 9 8 7 32 32 H 1.08998 * 109.47298 * 60.00274 * 9 8 7 33 33 H 0.97007 * 119.99889 * 179.97438 * 13 12 10 34 34 H 1.08002 * 119.55436 * 180.25244 * 20 18 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2091 0.0000 4 6 3.4298 1.2729 -0.0005 5 6 4.0485 2.5196 -0.0069 6 7 5.4366 2.6274 -0.0133 7 6 6.2651 1.4193 -0.0188 8 6 7.7432 1.8145 -0.0246 9 6 8.6085 0.5527 -0.0298 10 6 10.0643 0.9420 -0.0361 11 1 10.3443 1.9850 -0.0360 12 6 11.0388 -0.0334 -0.0421 13 7 10.6977 -1.3036 -0.0417 14 14 12.8433 0.4491 -0.0492 15 1 13.1461 1.2513 1.1632 16 1 13.6832 -0.7755 -0.0543 17 1 13.1353 1.2553 -1.2617 18 6 3.2416 3.6601 -0.0016 19 35 4.0201 5.3834 -0.0036 20 6 1.8713 3.5137 -0.0006 21 7 1.3171 2.3145 -0.0001 22 1 -0.3634 0.5137 -0.8900 23 1 -0.3634 -1.0277 0.0005 24 1 -0.3634 0.5139 0.8900 25 1 4.0199 0.3684 -0.0005 26 1 5.8550 3.5025 -0.0142 27 1 6.0511 0.8278 0.8714 28 1 6.0427 0.8301 -0.9085 29 1 7.9575 2.4061 -0.9146 30 1 7.9653 2.4033 0.8653 31 1 8.3940 -0.0386 0.8604 32 1 8.3865 -0.0365 -0.9195 33 1 11.3833 -1.9899 -0.0462 34 1 1.2418 4.3912 -0.0007 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000596107331.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:11:03 Heat of formation + Delta-G solvation = -14.971997 kcal Electronic energy + Delta-G solvation = -17453.218095 eV Core-core repulsion = 14432.152557 eV Total energy + Delta-G solvation = -3021.065538 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 314.037 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -40.70894 -38.38588 -36.55219 -33.93952 -32.38342 -31.78975 -30.25498 -29.06040 -27.21028 -26.56231 -24.00103 -22.68108 -21.91825 -20.50495 -18.52174 -17.51666 -16.37326 -16.12418 -15.89402 -15.45241 -15.01405 -14.87979 -14.50493 -14.02683 -13.87504 -13.81283 -12.48289 -12.38737 -12.21238 -11.89714 -11.76073 -11.74306 -11.01206 -10.84890 -10.79791 -10.64635 -10.55357 -10.53695 -9.85912 -9.73632 -9.53194 -9.20781 -8.56550 -8.41854 -7.90140 -6.06828 -4.10022 0.97090 1.38404 1.57054 2.88675 3.29523 3.34325 3.35953 3.43868 3.64172 4.20951 4.40734 4.71921 4.95677 5.11082 5.17449 5.29245 5.37545 5.43434 5.47475 5.53853 5.57876 5.73531 5.96725 6.06321 6.46087 6.49762 6.87657 7.04773 7.13885 7.55200 7.55852 7.67324 7.76659 7.90968 8.32254 8.95977 9.54590 11.04384 Molecular weight = 314.04amu Principal moments of inertia in cm(-1) A = 0.015040 B = 0.003427 C = 0.002800 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1861.275963 B = 8168.576134 C = 9998.797276 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.041 3.959 2 O -0.304 6.304 3 C 0.367 3.633 4 C -0.269 4.269 5 C 0.313 3.687 6 N -0.714 5.714 7 C 0.111 3.889 8 C -0.121 4.121 9 C 0.026 3.974 10 C -0.525 4.525 11 H 0.055 0.945 12 C 0.058 3.942 13 N -0.894 5.894 14 Si 0.894 3.106 15 H -0.277 1.277 16 H -0.287 1.287 17 H -0.276 1.276 18 C -0.262 4.262 19 Br -0.044 7.044 20 C 0.211 3.789 21 N -0.579 5.579 22 H 0.059 0.941 23 H 0.095 0.905 24 H 0.059 0.941 25 H 0.149 0.851 26 H 0.407 0.593 27 H 0.066 0.934 28 H 0.066 0.934 29 H 0.056 0.944 30 H 0.056 0.944 31 H 0.019 0.981 32 H 0.019 0.981 33 H 0.262 0.738 34 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.498 10.314 0.091 22.947 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.054 4.054 2 O -0.210 6.210 3 C 0.191 3.809 4 C -0.297 4.297 5 C 0.193 3.807 6 N -0.339 5.339 7 C -0.011 4.011 8 C -0.159 4.159 9 C -0.012 4.012 10 C -0.563 4.563 11 H 0.073 0.927 12 C -0.143 4.143 13 N -0.533 5.533 14 Si 0.721 3.279 15 H -0.202 1.202 16 H -0.212 1.212 17 H -0.202 1.202 18 C -0.350 4.350 19 Br 0.039 6.961 20 C 0.053 3.947 21 N -0.307 5.307 22 H 0.078 0.922 23 H 0.113 0.887 24 H 0.078 0.922 25 H 0.166 0.834 26 H 0.245 0.755 27 H 0.084 0.916 28 H 0.084 0.916 29 H 0.075 0.925 30 H 0.075 0.925 31 H 0.038 0.962 32 H 0.038 0.962 33 H 0.072 0.928 34 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -20.768 10.177 0.090 23.128 hybrid contribution 1.699 0.298 -0.007 1.725 sum -19.069 10.475 0.084 21.757 Atomic orbital electron populations 1.22862 0.77221 1.02865 1.02494 1.86264 1.22905 1.24571 1.87292 1.19484 0.88658 0.84509 0.88293 1.20336 0.92277 0.97477 1.19569 1.17410 0.84920 0.91443 0.86904 1.45357 1.01437 1.10795 1.76333 1.21875 0.91769 0.85839 1.01648 1.21884 0.90845 1.01982 1.01225 1.19019 0.93530 0.91019 0.97632 1.21152 0.91118 0.92790 1.51228 0.92673 1.25014 0.99217 0.94962 0.95154 1.69947 1.33550 0.99388 1.50387 0.86634 0.84761 0.77827 0.78652 1.20211 1.21226 1.20206 1.22106 0.96095 0.90650 1.26166 1.96631 1.82944 1.18168 1.98340 1.22043 0.89875 0.94191 0.88586 1.67482 1.39600 0.98029 1.25550 0.92245 0.88700 0.92249 0.83359 0.75517 0.91557 0.91553 0.92525 0.92527 0.96234 0.96236 0.92824 0.81977 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.37 10.38 101.05 1.05 1.42 16 2 O -0.30 -3.86 10.47 -18.79 -0.20 -4.06 16 3 C 0.37 5.02 7.48 -17.18 -0.13 4.89 16 4 C -0.27 -3.79 9.31 -39.09 -0.36 -4.15 16 5 C 0.31 4.34 6.69 -83.60 -0.56 3.78 16 6 N -0.71 -10.13 5.68 -58.46 -0.33 -10.47 16 7 C 0.11 1.76 4.95 -4.04 -0.02 1.74 16 8 C -0.12 -2.30 5.27 -26.73 -0.14 -2.44 16 9 C 0.03 0.63 4.97 -27.88 -0.14 0.49 16 10 C -0.52 -14.42 9.11 -34.44 -0.31 -14.73 16 11 H 0.06 1.47 7.74 -52.48 -0.41 1.06 16 12 C 0.06 1.63 5.46 -17.82 -0.10 1.54 16 13 N -0.89 -26.30 13.29 55.43 0.74 -25.57 16 14 Si 0.89 21.28 29.54 -169.99 -5.02 16.25 16 15 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 16 H -0.29 -6.77 7.11 56.52 0.40 -6.36 16 17 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 18 C -0.26 -3.28 6.26 -39.19 -0.25 -3.52 16 19 Br -0.04 -0.49 32.28 -68.01 -2.20 -2.68 16 20 C 0.21 2.45 10.92 -17.59 -0.19 2.26 16 21 N -0.58 -7.45 9.21 -13.40 -0.12 -7.57 16 22 H 0.06 0.52 8.10 -51.93 -0.42 0.10 16 23 H 0.09 0.61 8.14 -51.93 -0.42 0.19 16 24 H 0.06 0.52 8.10 -51.93 -0.42 0.10 16 25 H 0.15 2.06 6.89 -52.49 -0.36 1.69 16 26 H 0.41 5.52 7.02 -40.82 -0.29 5.24 16 27 H 0.07 1.05 7.98 -51.93 -0.41 0.63 16 28 H 0.07 1.05 8.00 -51.93 -0.42 0.63 16 29 H 0.06 1.06 8.14 -51.93 -0.42 0.63 16 30 H 0.06 1.06 8.14 -51.93 -0.42 0.63 16 31 H 0.02 0.50 8.14 -51.93 -0.42 0.08 16 32 H 0.02 0.50 8.14 -51.93 -0.42 0.08 16 33 H 0.26 7.31 8.31 -40.82 -0.34 6.97 16 34 H 0.16 1.43 8.06 -52.49 -0.42 1.00 16 LS Contribution 313.50 15.07 4.72 4.72 Total: -1.00 -29.61 313.50 -7.96 -37.57 By element: Atomic # 1 Polarization: 4.93 SS G_CDS: -4.40 Total: 0.53 kcal Atomic # 6 Polarization: -7.57 SS G_CDS: -1.15 Total: -8.73 kcal Atomic # 7 Polarization: -43.89 SS G_CDS: 0.28 Total: -43.61 kcal Atomic # 8 Polarization: -3.86 SS G_CDS: -0.20 Total: -4.06 kcal Atomic # 14 Polarization: 21.28 SS G_CDS: -5.02 Total: 16.25 kcal Atomic # 35 Polarization: -0.49 SS G_CDS: -2.20 Total: -2.68 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -29.61 -7.96 -37.57 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000596107331.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.596 kcal (2) G-P(sol) polarization free energy of solvation -29.612 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.016 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.956 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.568 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.972 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds