Wall clock time and date at job start Tue Mar 31 2020 10:20:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 C 1.53005 * 109.46983 * 333.69408 * 3 2 1 5 5 N 1.46894 * 109.47057 * 173.96959 * 4 3 2 6 6 C 1.46903 * 111.00046 * 71.60300 * 5 4 3 7 7 C 1.50695 * 109.47220 * 283.77120 * 6 5 4 8 8 H 1.08003 * 119.99959 * 357.63114 * 7 6 5 9 9 C 1.37876 * 120.00060 * 177.63338 * 7 6 5 10 10 N 1.31512 * 119.99886 * 359.97438 * 9 7 6 11 11 Si 1.86808 * 119.99844 * 179.97438 * 9 7 6 12 12 H 1.48495 * 109.47160 * 90.00214 * 11 9 7 13 13 H 1.48500 * 109.46732 * 209.99944 * 11 9 7 14 14 H 1.48494 * 109.47257 * 329.99846 * 11 9 7 15 15 C 1.46902 * 111.00036 * 195.55733 * 5 4 3 16 16 C 1.50695 * 109.47110 * 66.04543 * 15 5 4 17 17 N 1.32135 * 119.98738 * 90.00114 * 16 15 5 18 18 C 1.32112 * 120.03211 * 179.97438 * 17 16 15 19 19 C 1.38530 * 120.01223 * 0.02562 * 18 17 16 20 20 Cl 1.73599 * 120.01043 * 179.97438 * 19 18 17 21 21 N 1.32238 * 119.98120 * 359.97438 * 19 18 17 22 22 C 1.32270 * 119.96887 * 359.97438 * 21 19 18 23 23 Cl 1.73602 * 120.00629 * 180.02562 * 22 21 19 24 24 H 1.09003 * 109.46905 * 213.69827 * 3 2 1 25 25 H 1.08994 * 109.47215 * 93.69082 * 3 2 1 26 26 H 1.09007 * 109.46706 * 53.96989 * 4 3 2 27 27 H 1.09005 * 109.47192 * 293.97272 * 4 3 2 28 28 H 1.09007 * 109.46773 * 43.76860 * 6 5 4 29 29 H 1.08993 * 109.47430 * 163.76604 * 6 5 4 30 30 H 0.97004 * 119.99421 * 179.97438 * 10 9 7 31 31 H 1.09000 * 109.46986 * 306.04321 * 15 5 4 32 32 H 1.09004 * 109.47148 * 186.04890 * 15 5 4 33 33 H 1.07997 * 119.99563 * 180.02562 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1186 -1.2923 0.6393 5 7 4.5803 -1.3584 0.5100 6 6 5.2319 -0.3866 1.3983 7 6 5.1060 0.9950 0.8100 8 1 4.6269 1.1323 -0.1482 9 6 5.6024 2.0838 1.4949 10 7 6.1853 1.9166 2.6618 11 14 5.4469 3.7964 0.7651 12 1 4.1709 4.4108 1.2117 13 1 6.5855 4.6338 1.2208 14 1 5.4609 3.7061 -0.7170 15 6 5.0706 -2.7189 0.7681 16 6 4.5730 -3.6454 -0.3112 17 7 5.2912 -3.8317 -1.4046 18 6 4.8560 -4.6441 -2.3511 19 6 3.6459 -5.3009 -2.1981 20 17 3.0738 -6.3679 -3.4422 21 7 2.9267 -5.1148 -1.1041 22 6 3.3636 -4.3021 -0.1565 23 17 2.4206 -4.0576 1.2804 24 1 2.9709 0.8558 0.5702 25 1 2.9713 0.0670 -1.0255 26 1 2.6701 -2.1485 0.1353 27 1 2.8460 -1.3081 1.6946 28 1 4.7519 -0.4100 2.3768 29 1 6.2862 -0.6416 1.5047 30 1 6.5349 2.6827 3.1434 31 1 4.7044 -3.0595 1.7366 32 1 6.1607 -2.7177 0.7718 33 1 5.4437 -4.7962 -3.2443 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001141138745.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:20:10 Heat of formation + Delta-G solvation = 77.965073 kcal Electronic energy + Delta-G solvation = -21156.745834 eV Core-core repulsion = 17691.306857 eV Total energy + Delta-G solvation = -3465.438978 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 314.040 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.54588 -37.89154 -37.11774 -36.99655 -35.98282 -34.65039 -32.95051 -32.04261 -30.55240 -27.87659 -25.96065 -25.14804 -23.55726 -22.63513 -20.42612 -18.50118 -17.90544 -17.63773 -16.40726 -16.04831 -15.75056 -15.20241 -14.84088 -14.74627 -14.24187 -14.00031 -13.51917 -12.98841 -12.61974 -12.51924 -12.42086 -12.23996 -12.15037 -12.06663 -11.92912 -11.66397 -11.32954 -11.20460 -11.00422 -10.88141 -10.83001 -10.63209 -10.39963 -9.81253 -9.56080 -9.33669 -9.21345 -8.54013 -7.63316 -6.16544 -4.17880 0.16492 0.59193 1.09001 1.56344 3.06706 3.17658 3.22568 3.25608 3.33430 3.35705 3.70936 3.82780 4.16045 4.26449 4.39821 4.53946 4.76940 5.02850 5.19385 5.45387 5.52077 5.62287 5.76518 5.90827 5.94541 6.37765 6.58465 6.65616 6.93495 7.10561 7.24467 7.59660 7.80601 7.92625 8.00122 8.28056 8.87138 9.45630 10.93358 Molecular weight = 314.04amu Principal moments of inertia in cm(-1) A = 0.016178 B = 0.004077 C = 0.003844 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1730.349358 B = 6866.544892 C = 7282.797802 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.469 5.469 2 C 0.219 3.781 3 C -0.039 4.039 4 C 0.065 3.935 5 N -0.522 5.522 6 C 0.191 3.809 7 C -0.516 4.516 8 H 0.074 0.926 9 C 0.061 3.939 10 N -0.892 5.892 11 Si 0.891 3.109 12 H -0.280 1.280 13 H -0.286 1.286 14 H -0.270 1.270 15 C 0.098 3.902 16 C 0.132 3.868 17 N -0.385 5.385 18 C 0.082 3.918 19 C 0.128 3.872 20 Cl -0.009 7.009 21 N -0.428 5.428 22 C 0.139 3.861 23 Cl 0.006 6.994 24 H 0.149 0.851 25 H 0.109 0.891 26 H 0.056 0.944 27 H 0.042 0.958 28 H 0.005 0.995 29 H 0.035 0.965 30 H 0.263 0.737 31 H 0.060 0.940 32 H 0.106 0.894 33 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.263 -14.404 -7.110 16.113 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.147 5.147 2 C -0.098 4.098 3 C -0.079 4.079 4 C -0.065 4.065 5 N -0.247 5.247 6 C 0.067 3.933 7 C -0.554 4.554 8 H 0.092 0.908 9 C -0.142 4.142 10 N -0.530 5.530 11 Si 0.719 3.281 12 H -0.206 1.206 13 H -0.212 1.212 14 H -0.195 1.195 15 C -0.031 4.031 16 C -0.010 4.010 17 N -0.100 5.100 18 C -0.080 4.080 19 C -0.040 4.040 20 Cl 0.019 6.981 21 N -0.146 5.146 22 C -0.030 4.030 23 Cl 0.035 6.965 24 H 0.166 0.834 25 H 0.127 0.873 26 H 0.075 0.925 27 H 0.060 0.940 28 H 0.022 0.978 29 H 0.053 0.947 30 H 0.073 0.927 31 H 0.078 0.922 32 H 0.124 0.876 33 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges -2.862 -14.236 -7.408 16.301 hybrid contribution -0.114 0.541 0.424 0.697 sum -2.976 -13.695 -6.984 15.658 Atomic orbital electron populations 1.81112 1.13395 1.09930 1.10251 1.29827 0.95777 0.92170 0.92067 1.19993 0.79206 1.03178 1.05534 1.22137 0.89640 0.95707 0.98967 1.62153 1.03635 1.01987 1.56965 1.19913 0.94350 0.89482 0.89598 1.21245 1.38334 0.90265 1.05562 0.90756 1.24968 0.95097 0.99267 0.94856 1.69938 1.38417 1.31050 1.13634 0.86598 0.77785 0.84063 0.79702 1.20599 1.21218 1.19505 1.21067 1.02172 0.88556 0.91344 1.22409 0.89226 0.94490 0.94878 1.68691 1.30732 1.11273 0.99270 1.23861 0.92814 0.91834 0.99471 1.22789 0.92943 0.96878 0.91409 1.98433 1.89548 1.62606 1.47502 1.67042 1.33078 1.14541 0.99988 1.22679 0.92374 0.96365 0.91564 1.98450 1.72055 1.94314 1.31688 0.83385 0.87346 0.92536 0.93951 0.97757 0.94740 0.92712 0.92248 0.87586 0.79574 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -8.86 18.54 42.15 0.78 -8.08 16 2 C 0.22 3.75 15.43 -20.76 -0.32 3.43 16 3 C -0.04 -0.64 4.40 -29.52 -0.13 -0.77 16 4 C 0.07 1.07 3.57 -3.82 -0.01 1.05 16 5 N -0.52 -9.18 4.47 -237.51 -1.06 -10.24 16 6 C 0.19 4.10 4.76 -4.98 -0.02 4.07 16 7 C -0.52 -12.09 6.93 -34.44 -0.24 -12.33 16 8 H 0.07 1.67 5.89 -52.48 -0.31 1.36 16 9 C 0.06 1.52 5.46 -17.82 -0.10 1.42 16 10 N -0.89 -23.78 13.29 55.43 0.74 -23.05 16 11 Si 0.89 19.52 29.54 -169.99 -5.02 14.50 16 12 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 13 H -0.29 -6.39 7.11 56.52 0.40 -5.99 16 14 H -0.27 -5.82 7.11 56.52 0.40 -5.42 16 15 C 0.10 1.46 5.06 -4.98 -0.03 1.43 16 16 C 0.13 1.86 5.84 -82.38 -0.48 1.38 16 17 N -0.39 -5.17 10.42 -9.23 -0.10 -5.27 16 18 C 0.08 0.88 11.01 -17.32 -0.19 0.69 16 19 C 0.13 1.48 7.29 -17.27 -0.13 1.36 16 20 Cl -0.01 -0.09 29.13 -51.86 -1.51 -1.60 16 21 N -0.43 -5.86 10.47 -7.31 -0.08 -5.94 16 22 C 0.14 1.92 6.18 -17.27 -0.11 1.81 16 23 Cl 0.01 0.09 24.50 -51.86 -1.27 -1.18 16 24 H 0.15 2.71 5.48 -51.93 -0.28 2.42 16 25 H 0.11 1.69 7.93 -51.93 -0.41 1.27 16 26 H 0.06 0.88 4.18 -51.92 -0.22 0.66 16 27 H 0.04 0.70 7.71 -51.93 -0.40 0.30 16 28 H 0.00 0.11 7.78 -51.92 -0.40 -0.30 16 29 H 0.03 0.80 7.72 -51.93 -0.40 0.40 16 30 H 0.26 6.75 8.31 -40.82 -0.34 6.41 16 31 H 0.06 0.83 6.88 -51.93 -0.36 0.47 16 32 H 0.11 1.57 7.83 -51.93 -0.41 1.16 16 33 H 0.19 1.31 8.06 -52.49 -0.42 0.89 16 LS Contribution 315.35 15.07 4.75 4.75 Total: -1.00 -27.37 315.35 -7.27 -34.63 By element: Atomic # 1 Polarization: 0.66 SS G_CDS: -2.75 Total: -2.09 kcal Atomic # 6 Polarization: 5.30 SS G_CDS: -1.75 Total: 3.55 kcal Atomic # 7 Polarization: -52.85 SS G_CDS: 0.28 Total: -52.57 kcal Atomic # 14 Polarization: 19.52 SS G_CDS: -5.02 Total: 14.50 kcal Atomic # 17 Polarization: 0.00 SS G_CDS: -2.78 Total: -2.78 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -27.37 -7.27 -34.63 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001141138745.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 112.599 kcal (2) G-P(sol) polarization free energy of solvation -27.367 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 85.232 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.267 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.634 kcal (6) G-S(sol) free energy of system = (1) + (5) 77.965 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds