Wall clock time and date at job start Tue Mar 31 2020 10:20:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.43200 * 179.97438 * 2 1 4 4 C 1.43205 * 119.99625 * 114.02934 * 3 2 1 5 5 N 3.51037 * 140.68848 * 114.01970 * 2 1 3 6 6 C 1.41131 * 120.00279 * 294.02314 * 3 2 1 7 7 C 1.38947 * 119.99849 * 354.61060 * 6 3 2 8 8 H 1.08000 * 119.99895 * 332.50772 * 7 6 3 9 9 C 1.40872 * 119.99700 * 152.50612 * 7 6 3 10 10 N 1.30317 * 119.99778 * 1.83953 * 9 7 6 11 11 Si 1.86794 * 119.99691 * 181.83657 * 9 7 6 12 12 H 1.48504 * 109.47549 * 0.02562 * 11 9 7 13 13 H 1.48497 * 109.47062 * 120.00051 * 11 9 7 14 14 H 1.48502 * 109.47343 * 240.00073 * 11 9 7 15 15 N 1.38436 * 119.99963 * 174.61193 * 6 3 2 16 16 C 1.38532 * 119.99935 * 120.64864 * 15 6 3 17 17 N 1.32971 * 120.82597 * 357.01567 * 16 15 6 18 18 C 1.32168 * 121.02946 * 179.97438 * 17 16 15 19 19 Cl 1.73596 * 118.66325 * 180.02562 * 18 17 16 20 20 N 1.31697 * 122.68010 * 359.97438 * 18 17 16 21 21 C 1.33173 * 120.69039 * 0.03888 * 20 18 17 22 22 N 1.36783 * 134.28544 * 180.02562 * 21 20 18 23 23 H 0.97000 * 124.99257 * 359.97438 * 22 21 20 24 24 C 1.37125 * 110.02006 * 179.97438 * 22 21 20 25 25 C 1.34301 * 109.81350 * 0.02562 * 24 22 21 26 26 C 1.40268 * 120.82319 * 176.99355 * 16 15 6 27 27 H 0.96997 * 119.99216 * 185.00826 * 10 9 7 28 28 H 0.96995 * 120.00307 * 300.65203 * 15 6 3 29 29 H 1.07997 * 125.08822 * 180.26182 * 24 22 21 30 30 H 1.07997 * 126.58806 * 179.97438 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2837 0.5060 -1.1328 5 7 3.8520 0.9053 -2.0314 6 6 3.2740 -0.4966 1.1163 7 6 2.5840 -0.8825 2.2590 8 1 1.6338 -0.4270 2.4957 9 6 3.1240 -1.8678 3.1087 10 7 4.2872 -2.3916 2.8423 11 14 2.1728 -2.4234 4.6172 12 1 0.8891 -1.6808 4.6943 13 1 1.8967 -3.8793 4.5199 14 1 2.9759 -2.1524 5.8366 15 7 4.6538 -0.5999 1.0729 16 6 5.4290 0.0843 1.9948 17 7 4.8686 0.8910 2.8912 18 6 5.6042 1.5453 3.7730 19 17 4.8085 2.5817 4.9159 20 7 6.9163 1.4423 3.8206 21 6 7.5682 0.6588 2.9635 22 7 8.8856 0.3494 2.7643 23 1 9.6245 0.7017 3.2846 24 6 9.0083 -0.5319 1.7210 25 6 7.7951 -0.8158 1.2198 26 6 6.8245 -0.0570 2.0063 27 1 4.6266 -3.1204 3.3850 28 1 5.0778 -1.1512 0.3968 29 1 9.9406 -0.9398 1.3592 30 1 7.5783 -1.4780 0.3946 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001158210532.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:20:15 Heat of formation + Delta-G solvation = 142.612694 kcal Electronic energy + Delta-G solvation = -22576.862199 eV Core-core repulsion = 19013.119059 eV Total energy + Delta-G solvation = -3563.743140 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 314.038 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.50080 -38.67475 -37.43784 -36.25536 -35.32123 -34.72335 -33.94509 -32.35276 -30.95573 -30.05566 -28.30428 -27.10942 -23.74944 -23.12295 -21.42194 -20.50230 -19.19708 -19.07752 -17.49452 -16.89781 -16.41875 -15.95938 -15.61961 -15.25413 -14.68833 -14.19946 -13.72613 -13.26366 -13.23966 -13.08088 -12.82607 -12.59194 -12.29419 -11.92312 -11.84419 -11.68799 -11.55215 -11.39513 -11.05469 -10.96545 -10.92473 -10.73335 -10.47118 -10.42552 -10.05137 -9.04728 -8.77116 -8.76242 -8.05643 -7.71806 -7.04608 -5.40616 1.25003 1.73829 1.78217 2.24613 2.74424 2.80017 2.82575 2.91063 3.02188 3.44468 3.62708 3.87254 4.06299 4.24953 4.31454 4.37518 4.79656 4.90111 5.05753 5.17744 5.32247 5.49489 5.65619 5.76688 6.20832 6.24404 6.36308 6.49675 6.92502 7.06713 7.10543 7.28309 7.48454 7.71584 7.78056 8.10413 8.24728 8.71717 8.94818 9.14511 9.22571 Molecular weight = 314.04amu Principal moments of inertia in cm(-1) A = 0.010132 B = 0.006665 C = 0.005611 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2762.982071 B = 4199.902163 C = 4988.796585 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.531 5.531 2 C 0.327 3.673 3 C -0.304 4.304 4 C 0.308 3.692 5 N -0.533 5.533 6 C 0.377 3.623 7 C -0.344 4.344 8 H 0.113 0.887 9 C 0.074 3.926 10 N -0.735 5.735 11 Si 0.926 3.074 12 H -0.246 1.246 13 H -0.264 1.264 14 H -0.263 1.263 15 N -0.610 5.610 16 C 0.547 3.453 17 N -0.559 5.559 18 C 0.432 3.568 19 Cl 0.009 6.991 20 N -0.578 5.578 21 C 0.350 3.650 22 N -0.571 5.571 23 H 0.418 0.582 24 C 0.023 3.977 25 C -0.146 4.146 26 C -0.258 4.258 27 H 0.300 0.700 28 H 0.412 0.588 29 H 0.176 0.824 30 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.529 -2.307 6.797 13.581 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.213 5.213 2 C 0.019 3.981 3 C -0.323 4.323 4 C 0.001 3.999 5 N -0.216 5.216 6 C 0.274 3.726 7 C -0.372 4.372 8 H 0.131 0.869 9 C -0.156 4.156 10 N -0.354 5.354 11 Si 0.748 3.252 12 H -0.168 1.168 13 H -0.188 1.188 14 H -0.188 1.188 15 N -0.231 5.231 16 C 0.298 3.702 17 N -0.289 5.289 18 C 0.134 3.866 19 Cl 0.037 6.963 20 N -0.308 5.308 21 C 0.111 3.889 22 N -0.179 5.179 23 H 0.255 0.745 24 C -0.101 4.101 25 C -0.172 4.172 26 C -0.272 4.272 27 H 0.111 0.889 28 H 0.251 0.749 29 H 0.193 0.807 30 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 10.384 -1.135 6.261 12.179 hybrid contribution 0.905 -1.023 0.629 1.504 sum 11.289 -2.158 6.891 13.401 Atomic orbital electron populations 1.81056 1.12183 1.17356 1.10708 1.24607 0.91227 0.90579 0.91714 1.12876 0.83168 1.39859 0.96366 1.25227 0.92490 0.90569 0.91636 1.81056 1.09857 1.18073 1.12573 1.16733 0.79604 0.85499 0.90812 1.20231 1.04154 1.11497 1.01338 0.86900 1.26548 0.94389 0.95467 0.99186 1.69469 1.14487 1.16302 1.35139 0.85868 0.81044 0.79546 0.78745 1.16818 1.18807 1.18760 1.41401 1.04681 1.46583 1.30483 1.17240 0.84587 0.84005 0.84334 1.67510 1.38793 1.14327 1.08282 1.21799 0.84002 0.90901 0.89927 1.98389 1.78311 1.63251 1.56347 1.66469 1.08781 1.26019 1.29553 1.17662 0.85412 0.93526 0.92263 1.41352 1.04915 1.40745 1.30843 0.74506 1.21705 0.99662 0.96909 0.91837 1.21444 0.90328 1.03291 1.02164 1.19770 0.93162 1.09150 1.05079 0.88854 0.74923 0.80685 0.83313 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.53 -12.63 18.54 41.84 0.78 -11.85 16 2 C 0.33 7.48 14.05 -22.47 -0.32 7.16 16 3 C -0.30 -6.63 5.88 -104.95 -0.62 -7.24 16 4 C 0.31 6.88 14.82 -22.48 -0.33 6.55 16 5 N -0.53 -12.35 18.54 41.83 0.78 -11.57 16 6 C 0.38 7.83 5.49 -83.52 -0.46 7.37 16 7 C -0.34 -7.16 7.52 -38.32 -0.29 -7.44 16 8 H 0.11 2.41 7.28 -52.49 -0.38 2.03 16 9 C 0.07 1.42 5.30 -17.20 -0.09 1.33 16 10 N -0.73 -13.81 10.93 55.60 0.61 -13.20 16 11 Si 0.93 15.49 29.57 -169.99 -5.03 10.46 16 12 H -0.25 -4.21 7.11 56.52 0.40 -3.81 16 13 H -0.26 -4.28 7.11 56.52 0.40 -3.88 16 14 H -0.26 -4.46 7.11 56.52 0.40 -4.06 16 15 N -0.61 -11.60 3.29 -9.48 -0.03 -11.63 16 16 C 0.55 10.57 6.05 -154.56 -0.94 9.63 16 17 N -0.56 -11.40 9.05 -10.70 -0.10 -11.50 16 18 C 0.43 8.22 8.15 -91.92 -0.75 7.47 16 19 Cl 0.01 0.15 29.25 -51.86 -1.52 -1.36 16 20 N -0.58 -10.46 10.43 -10.95 -0.11 -10.57 16 21 C 0.35 5.80 8.48 -155.85 -1.32 4.48 16 22 N -0.57 -6.82 6.03 -12.12 -0.07 -6.89 16 23 H 0.42 3.68 8.96 -40.82 -0.37 3.31 16 24 C 0.02 0.24 11.83 -16.57 -0.20 0.05 16 25 C -0.15 -1.94 10.98 -37.79 -0.41 -2.36 16 26 C -0.26 -4.43 6.32 -105.00 -0.66 -5.09 16 27 H 0.30 5.18 8.29 -40.82 -0.34 4.84 16 28 H 0.41 7.18 8.75 -40.82 -0.36 6.82 16 29 H 0.18 1.07 8.06 -52.49 -0.42 0.64 16 30 H 0.15 1.70 8.06 -52.49 -0.42 1.28 16 LS Contribution 311.22 15.07 4.69 4.69 Total: -1.00 -26.88 311.22 -7.48 -34.36 By element: Atomic # 1 Polarization: 8.26 SS G_CDS: -1.08 Total: 7.18 kcal Atomic # 6 Polarization: 28.29 SS G_CDS: -6.39 Total: 21.90 kcal Atomic # 7 Polarization: -79.07 SS G_CDS: 1.84 Total: -77.23 kcal Atomic # 14 Polarization: 15.49 SS G_CDS: -5.03 Total: 10.46 kcal Atomic # 17 Polarization: 0.15 SS G_CDS: -1.52 Total: -1.36 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -26.88 -7.48 -34.36 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001158210532.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 176.974 kcal (2) G-P(sol) polarization free energy of solvation -26.882 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 150.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.480 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.362 kcal (6) G-S(sol) free energy of system = (1) + (5) 142.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds