Wall clock time and date at job start Tue Mar 31 2020 11:00:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35659 * 117.00155 * 2 1 4 4 N 1.32306 * 119.55335 * 0.02562 * 3 2 1 5 5 C 1.31780 * 121.78938 * 179.97438 * 4 3 2 6 6 C 1.39264 * 120.68177 * 359.97438 * 5 4 3 7 7 C 1.48282 * 120.47402 * 179.97438 * 6 5 4 8 8 C 1.39844 * 119.53712 * 179.97438 * 7 6 5 9 9 C 1.37693 * 121.16500 * 179.97438 * 8 7 6 10 10 C 1.39595 * 120.19256 * 0.02562 * 9 8 7 11 11 C 1.43199 * 120.45402 * 179.97438 * 10 9 8 12 12 N 9.57937 * 146.42325 * 179.97438 * 3 1 2 13 13 C 1.46537 * 119.08720 * 0.02562 * 10 9 8 14 14 C 1.40850 * 120.55299 * 180.02562 * 13 10 9 15 15 H 1.08004 * 119.99580 * 334.73296 * 14 13 10 16 16 C 1.40233 * 120.00250 * 155.00569 * 14 13 10 17 17 N 1.30664 * 120.00100 * 343.29128 * 16 14 13 18 18 Si 1.86801 * 119.99684 * 163.28586 * 16 14 13 19 19 H 1.48500 * 109.47421 * 0.02562 * 18 16 14 20 20 H 1.48500 * 109.46777 * 120.00521 * 18 16 14 21 21 H 1.48506 * 109.47221 * 240.00085 * 18 16 14 22 22 C 1.38633 * 119.53608 * 0.30438 * 7 6 5 23 23 C 1.39933 * 119.05301 * 0.27252 * 6 5 4 24 24 C 1.38250 * 118.36306 * 359.48512 * 23 6 5 25 25 Cl 1.73601 * 120.38848 * 180.23845 * 24 23 6 26 26 H 1.08997 * 109.47296 * 180.02562 * 1 2 3 27 27 H 1.08999 * 109.47403 * 300.00645 * 1 2 3 28 28 H 1.09002 * 109.46894 * 60.00108 * 1 2 3 29 29 H 1.08003 * 119.65853 * 180.02562 * 5 4 3 30 30 H 1.07993 * 119.41511 * 359.97438 * 8 7 6 31 31 H 1.08010 * 119.90340 * 179.97438 * 9 8 7 32 32 H 0.96995 * 119.99713 * 185.17012 * 17 16 14 33 33 H 1.07995 * 120.13388 * 359.97438 * 22 7 6 34 34 H 1.08002 * 120.81807 * 179.72346 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 7 1.3157 2.3127 0.0005 5 6 1.8678 3.5093 0.0010 6 6 3.2530 3.6528 0.0016 7 6 3.8693 5.0015 0.0016 8 6 5.2624 5.1229 0.0027 9 6 5.8700 6.3585 0.0023 10 6 5.0971 7.5209 0.0012 11 6 5.7231 8.8088 0.0012 12 7 6.2197 9.8305 -0.0024 13 6 3.6363 7.4051 0.0011 14 6 2.8266 8.5576 -0.0005 15 1 3.2084 9.4862 0.3976 16 6 1.5230 8.4980 -0.5137 17 7 1.1657 7.4983 -1.2754 18 14 0.2971 9.8480 -0.1083 19 1 0.9448 10.8588 0.7657 20 1 -0.1567 10.4979 -1.3641 21 1 -0.8714 9.2606 0.5953 22 6 3.0562 6.1244 0.0075 23 6 4.0550 2.5062 -0.0042 24 6 3.4345 1.2707 0.0006 25 17 4.3787 -0.1861 0.0000 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 1.2394 4.3877 0.0019 30 1 5.8725 4.2318 0.0040 31 1 6.9479 6.4286 0.0036 32 1 0.2894 7.4944 -1.6912 33 1 1.9818 6.0158 0.0116 34 1 5.1322 2.5844 -0.0084 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001242930489.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:00:31 Heat of formation + Delta-G solvation = 31.348970 kcal Electronic energy + Delta-G solvation = -21976.628432 eV Core-core repulsion = 18479.308127 eV Total energy + Delta-G solvation = -3497.320305 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 314.056 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -40.56329 -38.39993 -37.36363 -36.48069 -35.22303 -34.31158 -32.52797 -31.48069 -30.09601 -28.72158 -27.06743 -25.98250 -23.88812 -23.28260 -21.22781 -20.97392 -18.49658 -17.92040 -17.30764 -16.85743 -16.12295 -16.05498 -15.22575 -14.85381 -14.39414 -13.96117 -13.70702 -13.68576 -13.16651 -13.01897 -12.88762 -12.77142 -12.07668 -11.97828 -11.84953 -11.81247 -11.65081 -11.52782 -11.39721 -11.28871 -11.02601 -10.88235 -10.69227 -10.30849 -9.94894 -9.74799 -9.53079 -9.43047 -8.60480 -7.88769 -7.34156 -7.15464 -4.84093 0.92469 1.16665 2.14650 2.21487 2.54395 2.87340 2.93207 2.96927 3.04069 3.61763 3.69676 3.84537 4.23690 4.35613 4.43529 4.84095 5.06106 5.15967 5.26615 5.28739 5.29270 5.37233 5.41309 5.58485 5.82882 5.96106 6.13737 6.18625 6.45377 6.61082 6.71379 6.85949 7.04650 7.17315 7.33617 7.52520 7.59250 7.71794 7.86993 8.07832 8.30983 8.40350 8.74613 9.64876 Molecular weight = 314.06amu Principal moments of inertia in cm(-1) A = 0.014466 B = 0.004059 C = 0.003201 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1935.069119 B = 6896.112530 C = 8743.855576 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.041 3.959 2 O -0.302 6.302 3 C 0.311 3.689 4 N -0.522 5.522 5 C 0.149 3.851 6 C -0.089 4.089 7 C -0.014 4.014 8 C -0.238 4.238 9 C -0.025 4.025 10 C -0.182 4.182 11 C 0.298 3.702 12 N -0.507 5.507 13 C 0.148 3.852 14 C -0.426 4.426 15 H 0.089 0.911 16 C 0.076 3.924 17 N -0.766 5.766 18 Si 0.915 3.085 19 H -0.256 1.256 20 H -0.269 1.269 21 H -0.265 1.265 22 C -0.141 4.141 23 C -0.035 4.035 24 C -0.105 4.105 25 Cl -0.056 7.056 26 H 0.094 0.906 27 H 0.059 0.941 28 H 0.059 0.941 29 H 0.175 0.825 30 H 0.101 0.899 31 H 0.102 0.898 32 H 0.292 0.708 33 H 0.133 0.867 34 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.617 -12.787 1.460 13.369 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 O -0.208 6.208 3 C 0.132 3.868 4 N -0.245 5.245 5 C -0.007 4.007 6 C -0.091 4.091 7 C -0.015 4.015 8 C -0.258 4.258 9 C -0.045 4.045 10 C -0.188 4.188 11 C -0.011 4.011 12 N -0.186 5.186 13 C 0.143 3.857 14 C -0.453 4.453 15 H 0.107 0.893 16 C -0.147 4.147 17 N -0.388 5.388 18 Si 0.738 3.262 19 H -0.179 1.179 20 H -0.193 1.193 21 H -0.190 1.190 22 C -0.160 4.160 23 C -0.061 4.061 24 C -0.135 4.135 25 Cl -0.028 7.028 26 H 0.112 0.888 27 H 0.077 0.923 28 H 0.078 0.922 29 H 0.192 0.808 30 H 0.119 0.881 31 H 0.120 0.880 32 H 0.103 0.897 33 H 0.150 0.850 34 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -3.808 -11.830 1.354 12.501 hybrid contribution -0.061 0.193 -0.043 0.207 sum -3.869 -11.637 1.311 12.333 Atomic orbital electron populations 1.22849 0.77303 1.02703 1.02610 1.86262 1.22747 1.24005 1.87835 1.19500 0.87599 0.85545 0.94155 1.67468 1.39366 0.98451 1.19202 1.22916 0.92823 0.93390 0.91526 1.19920 0.93496 0.94010 1.01696 1.18221 0.93233 0.89467 1.00621 1.20083 0.92886 0.95938 1.16851 1.20375 0.97278 0.91245 0.95647 1.16990 0.92469 0.85098 1.24226 1.25785 0.91434 0.92649 0.91258 1.81029 1.11134 1.11523 1.14921 1.18315 0.88275 0.92902 0.86236 1.19847 0.95910 0.97312 1.32235 0.89338 1.26120 0.98852 0.97024 0.92691 1.69661 1.21627 1.28799 1.18737 0.86096 0.79559 0.80624 0.79882 1.17884 1.19344 1.18975 1.21384 0.99336 0.90270 1.04977 1.21535 1.01469 0.88712 0.94355 1.20721 0.89158 0.89400 1.14193 1.98347 1.71719 1.35511 1.97211 0.88791 0.92263 0.92217 0.80772 0.88149 0.88001 0.89655 0.84999 0.82865 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.42 10.38 101.05 1.05 1.47 16 2 O -0.30 -4.16 9.93 -18.68 -0.19 -4.35 16 3 C 0.31 4.77 7.49 -17.03 -0.13 4.64 16 4 N -0.52 -8.27 9.19 -13.01 -0.12 -8.39 16 5 C 0.15 2.44 10.58 -17.19 -0.18 2.25 16 6 C -0.09 -1.48 5.89 -104.75 -0.62 -2.09 16 7 C -0.01 -0.26 5.86 -105.02 -0.62 -0.87 16 8 C -0.24 -4.27 9.38 -39.18 -0.37 -4.64 16 9 C -0.02 -0.47 9.74 -39.27 -0.38 -0.85 16 10 C -0.18 -3.94 5.95 -104.12 -0.62 -4.55 16 11 C 0.30 6.73 14.29 -22.47 -0.32 6.41 16 12 N -0.51 -11.85 18.54 41.84 0.78 -11.07 16 13 C 0.15 3.35 5.73 -104.68 -0.60 2.75 16 14 C -0.43 -9.81 8.57 -37.85 -0.32 -10.13 16 15 H 0.09 2.09 7.38 -52.48 -0.39 1.70 16 16 C 0.08 1.62 5.17 -17.30 -0.09 1.53 16 17 N -0.77 -16.27 10.95 55.56 0.61 -15.67 16 18 Si 0.92 16.35 29.60 -169.99 -5.03 11.32 16 19 H -0.26 -4.70 7.11 56.52 0.40 -4.30 16 20 H -0.27 -4.77 7.11 56.52 0.40 -4.37 16 21 H -0.27 -4.58 7.11 56.52 0.40 -4.18 16 22 C -0.14 -2.93 8.06 -38.55 -0.31 -3.24 16 23 C -0.04 -0.52 9.31 -38.94 -0.36 -0.88 16 24 C -0.11 -1.55 6.35 -39.26 -0.25 -1.80 16 25 Cl -0.06 -0.74 28.53 -51.86 -1.48 -2.22 16 26 H 0.09 0.70 8.14 -51.93 -0.42 0.28 16 27 H 0.06 0.62 8.10 -51.93 -0.42 0.19 16 28 H 0.06 0.63 8.10 -51.93 -0.42 0.21 16 29 H 0.18 2.79 6.16 -52.48 -0.32 2.47 16 30 H 0.10 1.53 6.15 -52.49 -0.32 1.21 16 31 H 0.10 1.69 8.06 -52.48 -0.42 1.27 16 32 H 0.29 5.57 8.30 -40.82 -0.34 5.24 16 33 H 0.13 2.72 4.29 -52.49 -0.23 2.49 16 34 H 0.15 2.01 6.25 -52.49 -0.33 1.68 16 LS Contribution 321.72 15.07 4.85 4.85 Total: -1.00 -24.55 321.72 -7.11 -31.66 By element: Atomic # 1 Polarization: 6.30 SS G_CDS: -2.41 Total: 3.89 kcal Atomic # 6 Polarization: -5.90 SS G_CDS: -4.12 Total: -10.02 kcal Atomic # 7 Polarization: -36.39 SS G_CDS: 1.26 Total: -35.13 kcal Atomic # 8 Polarization: -4.16 SS G_CDS: -0.19 Total: -4.35 kcal Atomic # 14 Polarization: 16.35 SS G_CDS: -5.03 Total: 11.32 kcal Atomic # 17 Polarization: -0.74 SS G_CDS: -1.48 Total: -2.22 kcal Total LS contribution 4.85 Total: 4.85 kcal Total: -24.55 -7.11 -31.66 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001242930489.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.006 kcal (2) G-P(sol) polarization free energy of solvation -24.546 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.460 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.111 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.657 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.349 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds