Wall clock time and date at job start Tue Mar 31 2020 10:29:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.36024 * 116.99561 * 2 1 4 4 C 1.38698 * 119.97045 * 0.02562 * 3 2 1 5 5 C 1.38468 * 119.97680 * 179.97438 * 4 3 2 6 6 O 1.36023 * 120.03902 * 179.97438 * 5 4 3 7 7 C 1.42903 * 117.00223 * 0.02717 * 6 5 4 8 8 C 1.39299 * 119.91864 * 359.97438 * 5 4 3 9 9 N 1.40234 * 120.02986 * 180.02562 * 8 5 4 10 10 C 1.46493 * 119.99720 * 180.02562 * 9 8 5 11 11 C 1.50706 * 109.47128 * 179.97438 * 10 9 8 12 12 O 1.21297 * 119.99667 * 359.97438 * 11 10 9 13 13 N 1.34773 * 120.00081 * 179.72554 * 11 10 9 14 14 C 1.37095 * 119.99878 * 180.02562 * 13 11 10 15 15 H 1.08004 * 120.00160 * 359.97438 * 14 13 11 16 16 C 1.38950 * 120.00380 * 179.97438 * 14 13 11 17 17 N 1.31412 * 119.99401 * 359.97438 * 16 14 13 18 18 Si 1.86800 * 120.00554 * 179.97438 * 16 14 13 19 19 H 1.48496 * 109.46681 * 0.02562 * 18 16 14 20 20 H 1.48500 * 109.47048 * 120.00010 * 18 16 14 21 21 H 1.48501 * 109.47100 * 240.00460 * 18 16 14 22 22 C 1.38646 * 119.93839 * 0.27732 * 8 5 4 23 23 C 1.38345 * 120.02290 * 359.44598 * 22 8 5 24 24 Cl 1.73594 * 119.96251 * 180.29928 * 23 22 8 25 25 H 1.09006 * 109.46685 * 180.02562 * 1 2 3 26 26 H 1.09000 * 109.46992 * 299.99752 * 1 2 3 27 27 H 1.09000 * 109.47336 * 60.00378 * 1 2 3 28 28 H 1.07997 * 120.01122 * 359.94705 * 4 3 2 29 29 H 1.09005 * 109.46887 * 299.99126 * 7 6 5 30 30 H 1.08998 * 109.47280 * 59.99321 * 7 6 5 31 31 H 1.09003 * 109.47315 * 179.97438 * 7 6 5 32 32 H 0.97005 * 119.99750 * 359.97438 * 9 8 5 33 33 H 1.09001 * 109.47786 * 60.00154 * 10 9 8 34 34 H 1.08998 * 109.47558 * 300.00017 * 10 9 8 35 35 H 0.96998 * 120.00525 * 359.97438 * 13 11 10 36 36 H 0.97004 * 120.00112 * 179.97438 * 17 16 14 37 37 H 1.08005 * 119.99135 * 179.70187 * 22 8 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2120 0.0000 4 6 1.2904 2.3748 0.0005 5 6 1.9188 3.6087 0.0011 6 8 1.1785 4.7498 0.0011 7 6 -0.2428 4.6012 0.0011 8 6 3.3099 3.6799 0.0016 9 7 3.9488 4.9282 0.0027 10 6 5.4118 5.0023 0.0027 11 6 5.8418 6.4467 0.0033 12 8 5.0079 7.3276 0.0033 13 7 7.1526 6.7597 0.0090 14 6 7.5437 8.0737 0.0101 15 1 6.8012 8.8580 0.0060 16 6 8.8951 8.3964 0.0166 17 7 9.7985 7.4420 0.0221 18 14 9.4280 10.1868 0.0173 19 1 8.2273 11.0605 0.0111 20 1 10.2341 10.4628 1.2336 21 1 10.2461 10.4603 -1.1914 22 6 4.0624 2.5154 -0.0042 23 6 3.4320 1.2839 0.0010 24 17 4.3757 -0.1732 0.0016 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 0.2119 2.3179 0.0001 29 1 -0.5507 4.0525 -0.8890 30 1 -0.5507 4.0523 0.8910 31 1 -0.7111 5.5855 0.0016 32 1 3.4218 5.7427 0.0027 33 1 5.8008 4.5083 -0.8877 34 1 5.8008 4.5067 0.8922 35 1 7.8195 6.0553 0.0131 36 1 10.7420 7.6672 0.0262 37 1 5.1411 2.5696 -0.0087 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000020046754.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:29:28 Heat of formation + Delta-G solvation = -84.681936 kcal Electronic energy + Delta-G solvation = -23192.472014 eV Core-core repulsion = 19382.811311 eV Total energy + Delta-G solvation = -3809.660702 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 314.087 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.66705 -38.92708 -38.45258 -37.19434 -36.25803 -34.51817 -33.80449 -31.37572 -30.22941 -29.57615 -28.19298 -27.19413 -25.90488 -24.34008 -22.44078 -21.60625 -19.48405 -18.90003 -18.09638 -17.46987 -16.95501 -16.37458 -16.12788 -15.59834 -15.49911 -14.89468 -14.79937 -14.71681 -14.51840 -14.18999 -13.73547 -13.53738 -13.34989 -13.08945 -12.44196 -12.36733 -11.92408 -11.90173 -11.64977 -11.55298 -11.49360 -11.48149 -11.15246 -10.80546 -10.64379 -10.39967 -10.30848 -9.63623 -9.41640 -8.60114 -8.56558 -8.08801 -6.87023 -6.50678 -3.92245 1.12043 1.47126 2.25355 3.11086 3.13088 3.13937 3.23115 3.29812 3.61494 3.65103 3.76176 4.14000 4.56605 4.75841 4.85955 4.89258 4.92318 4.98316 5.09641 5.17429 5.18293 5.23743 5.31720 5.49231 5.55845 5.71962 5.83680 5.90714 6.05249 6.11163 6.40008 6.99247 7.18738 7.47433 7.53967 7.94527 8.13490 8.47327 9.06573 9.40780 9.89349 10.66464 Molecular weight = 314.09amu Principal moments of inertia in cm(-1) A = 0.019756 B = 0.002951 C = 0.002574 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1416.961387 B = 9485.111970 C =10876.313307 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.307 6.307 3 C 0.104 3.896 4 C -0.237 4.237 5 C 0.094 3.906 6 O -0.309 6.309 7 C 0.031 3.969 8 C 0.191 3.809 9 N -0.717 5.717 10 C 0.112 3.888 11 C 0.431 3.569 12 O -0.592 6.592 13 N -0.552 5.552 14 C -0.303 4.303 15 H 0.105 0.895 16 C 0.025 3.975 17 N -0.896 5.896 18 Si 0.931 3.069 19 H -0.267 1.267 20 H -0.280 1.280 21 H -0.280 1.280 22 C -0.135 4.135 23 C -0.046 4.046 24 Cl -0.063 7.063 25 H 0.098 0.902 26 H 0.052 0.948 27 H 0.052 0.948 28 H 0.140 0.860 29 H 0.052 0.948 30 H 0.052 0.948 31 H 0.100 0.900 32 H 0.418 0.582 33 H 0.076 0.924 34 H 0.076 0.924 35 H 0.395 0.605 36 H 0.273 0.727 37 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.901 -14.521 -0.044 22.283 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.221 6.221 3 C 0.056 3.944 4 C -0.258 4.258 5 C 0.045 3.955 6 O -0.222 6.222 7 C -0.065 4.065 8 C 0.086 3.914 9 N -0.351 5.351 10 C -0.017 4.017 11 C 0.216 3.784 12 O -0.478 6.478 13 N -0.187 5.187 14 C -0.432 4.432 15 H 0.123 0.877 16 C -0.177 4.177 17 N -0.536 5.536 18 Si 0.758 3.242 19 H -0.192 1.192 20 H -0.206 1.206 21 H -0.206 1.206 22 C -0.160 4.160 23 C -0.074 4.074 24 Cl -0.035 7.035 25 H 0.117 0.883 26 H 0.070 0.930 27 H 0.070 0.930 28 H 0.157 0.843 29 H 0.071 0.929 30 H 0.071 0.929 31 H 0.119 0.881 32 H 0.258 0.742 33 H 0.094 0.906 34 H 0.094 0.906 35 H 0.229 0.771 36 H 0.083 0.917 37 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -16.801 -14.000 -0.043 21.870 hybrid contribution 0.204 0.536 0.002 0.574 sum -16.597 -13.465 -0.041 21.372 Atomic orbital electron populations 1.23004 0.78936 1.03730 1.00986 1.86150 1.20740 1.25823 1.89371 1.18012 0.90009 0.84334 1.01997 1.20884 1.00083 0.90749 1.14038 1.18212 0.89306 0.85335 1.02635 1.86106 1.18818 1.28226 1.89052 1.23023 0.78681 1.03880 1.00887 1.16948 0.87648 0.86930 0.99913 1.44366 1.05106 1.04830 1.80773 1.20971 0.81507 0.97216 1.01966 1.19712 0.83844 0.89391 0.85410 1.90516 1.51420 1.49095 1.56785 1.41799 1.04902 1.08974 1.63043 1.19770 0.92005 0.83487 1.47978 0.87698 1.25307 0.95461 1.00084 0.96896 1.69618 1.01730 1.32616 1.49685 0.85770 0.78786 0.81807 0.77812 1.19155 1.20627 1.20622 1.20168 1.00318 0.87968 1.07510 1.19637 0.88198 0.88018 1.11590 1.98342 1.72040 1.35890 1.97178 0.88346 0.92959 0.92951 0.84279 0.92901 0.92906 0.88127 0.74216 0.90592 0.90574 0.77123 0.91687 0.83495 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.20 9.81 101.05 0.99 1.20 16 2 O -0.31 -3.56 9.95 -19.82 -0.20 -3.76 16 3 C 0.10 1.33 6.68 -39.23 -0.26 1.07 16 4 C -0.24 -2.79 8.02 -39.33 -0.32 -3.10 16 5 C 0.09 1.31 6.70 -39.10 -0.26 1.05 16 6 O -0.31 -4.15 9.74 -19.81 -0.19 -4.34 16 7 C 0.03 0.26 9.81 101.05 0.99 1.25 16 8 C 0.19 2.91 6.67 -83.47 -0.56 2.36 16 9 N -0.72 -12.34 5.71 -59.62 -0.34 -12.68 16 10 C 0.11 1.96 5.40 -5.19 -0.03 1.93 16 11 C 0.43 9.91 7.85 -10.98 -0.09 9.82 16 12 O -0.59 -15.63 15.24 5.54 0.08 -15.54 16 13 N -0.55 -13.59 5.29 -10.96 -0.06 -13.65 16 14 C -0.30 -8.26 9.68 -14.93 -0.14 -8.40 16 15 H 0.11 3.01 7.16 -52.48 -0.38 2.63 16 16 C 0.03 0.66 5.50 -17.47 -0.10 0.56 16 17 N -0.90 -23.82 13.05 55.50 0.72 -23.10 16 18 Si 0.93 20.62 29.55 -169.99 -5.02 15.59 16 19 H -0.27 -5.93 7.11 56.52 0.40 -5.53 16 20 H -0.28 -6.11 7.11 56.52 0.40 -5.71 16 21 H -0.28 -6.11 7.11 56.52 0.40 -5.71 16 22 C -0.14 -1.90 9.09 -39.39 -0.36 -2.26 16 23 C -0.05 -0.63 6.33 -39.36 -0.25 -0.88 16 24 Cl -0.06 -0.82 28.49 -51.86 -1.48 -2.30 16 25 H 0.10 0.50 8.14 -51.93 -0.42 0.08 16 26 H 0.05 0.32 7.66 -51.93 -0.40 -0.08 16 27 H 0.05 0.32 7.66 -51.93 -0.40 -0.08 16 28 H 0.14 1.22 4.52 -52.49 -0.24 0.98 16 29 H 0.05 0.37 7.66 -51.93 -0.40 -0.02 16 30 H 0.05 0.37 7.66 -51.93 -0.40 -0.02 16 31 H 0.10 0.70 8.14 -51.93 -0.42 0.27 16 32 H 0.42 7.93 6.80 -40.82 -0.28 7.65 16 33 H 0.08 1.20 7.94 -51.93 -0.41 0.78 16 34 H 0.08 1.20 7.96 -51.93 -0.41 0.79 16 35 H 0.40 9.23 7.90 -40.82 -0.32 8.90 16 36 H 0.27 6.85 8.31 -40.82 -0.34 6.51 16 37 H 0.15 1.92 6.73 -52.48 -0.35 1.57 16 LS Contribution 334.15 15.07 5.04 5.04 Total: -1.00 -31.35 334.15 -5.78 -37.14 By element: Atomic # 1 Polarization: 16.98 SS G_CDS: -3.96 Total: 13.02 kcal Atomic # 6 Polarization: 4.96 SS G_CDS: -0.38 Total: 4.58 kcal Atomic # 7 Polarization: -49.76 SS G_CDS: 0.33 Total: -49.43 kcal Atomic # 8 Polarization: -23.34 SS G_CDS: -0.31 Total: -23.64 kcal Atomic # 14 Polarization: 20.62 SS G_CDS: -5.02 Total: 15.59 kcal Atomic # 17 Polarization: -0.82 SS G_CDS: -1.48 Total: -2.30 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -31.35 -5.78 -37.14 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000020046754.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.544 kcal (2) G-P(sol) polarization free energy of solvation -31.353 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.897 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.785 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.138 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.682 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds