Wall clock time and date at job start Tue Mar 31 2020 10:30:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42892 * 114.00097 * 2 1 4 4 C 1.53004 * 109.47066 * 184.30188 * 3 2 1 5 5 N 1.46903 * 109.47103 * 64.71954 * 4 3 2 6 6 C 1.46903 * 110.99867 * 195.56953 * 5 4 3 7 7 C 1.50702 * 109.46933 * 72.70742 * 6 5 4 8 8 H 1.07997 * 119.99541 * 245.29111 * 7 6 5 9 9 C 1.37870 * 120.00025 * 65.29336 * 7 6 5 10 10 N 1.31511 * 120.00398 * 8.86224 * 9 7 6 11 11 Si 1.86808 * 119.99587 * 188.86179 * 9 7 6 12 12 H 1.48500 * 109.46955 * 84.98536 * 11 9 7 13 13 H 1.48501 * 109.47046 * 204.98484 * 11 9 7 14 14 H 1.48496 * 109.46979 * 324.98378 * 11 9 7 15 15 C 1.39748 * 110.99821 * 71.61679 * 5 4 3 16 16 C 1.38877 * 120.08085 * 59.72635 * 15 5 4 17 17 C 1.38122 * 119.93864 * 179.72123 * 16 15 5 18 18 C 1.38296 * 120.09169 * 0.53055 * 17 16 15 19 19 N 1.48003 * 119.91859 * 179.74664 * 18 17 16 20 20 O 1.21804 * 119.99710 * 180.02562 * 19 18 17 21 21 O 1.21801 * 120.00156 * 0.02562 * 19 18 17 22 22 C 1.38267 * 120.15763 * 359.76653 * 18 17 16 23 23 C 1.38216 * 120.06119 * 359.95586 * 22 18 17 24 24 Cl 1.73597 * 120.04581 * 179.97438 * 23 22 18 25 25 H 1.08995 * 109.47357 * 304.75415 * 1 2 3 26 26 H 1.09001 * 109.47068 * 64.75746 * 1 2 3 27 27 H 1.09004 * 109.47435 * 184.75516 * 1 2 3 28 28 H 1.09002 * 109.47359 * 64.30465 * 3 2 1 29 29 H 1.08998 * 109.47412 * 304.30364 * 3 2 1 30 30 H 1.08996 * 109.47406 * 304.71744 * 4 3 2 31 31 H 1.08997 * 109.46926 * 184.71829 * 4 3 2 32 32 H 1.08993 * 109.46845 * 312.70245 * 6 5 4 33 33 H 1.08999 * 109.46638 * 192.70379 * 6 5 4 34 34 H 0.97003 * 119.99923 * 180.02562 * 10 9 7 35 35 H 1.08000 * 120.02850 * 359.97438 * 16 15 5 36 36 H 1.08000 * 119.95468 * 180.25463 * 17 16 15 37 37 H 1.07997 * 119.96950 * 179.97438 * 22 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 3.5318 1.1862 -0.1082 5 7 3.8857 0.5968 -1.4065 6 6 5.2777 0.1274 -1.4096 7 6 5.3891 -1.1196 -0.5707 8 1 5.9736 -1.1090 0.3374 9 6 4.7448 -2.2738 -0.9624 10 7 4.1800 -2.3416 -2.1481 11 14 4.6744 -3.7416 0.1911 12 1 3.5270 -3.5857 1.1209 13 1 4.5041 -4.9860 -0.6011 14 1 5.9360 -3.8196 0.9704 15 6 3.6605 1.5033 -2.4460 16 6 4.3236 2.7235 -2.4614 17 6 4.1032 3.6148 -3.4932 18 6 3.2151 3.2984 -4.5050 19 7 2.9776 4.2587 -5.6059 20 8 2.1954 3.9817 -6.4975 21 8 3.5644 5.3260 -5.6203 22 6 2.5482 2.0873 -4.4903 23 6 2.7682 1.1881 -3.4639 24 17 1.9302 -0.3320 -3.4456 25 1 -0.3634 0.5858 0.8443 26 1 -0.3633 0.4383 -0.9295 27 1 -0.3634 -1.0241 0.0852 28 1 1.7510 1.8186 0.9260 29 1 1.6289 1.8729 -0.8489 30 1 3.9043 0.5489 0.6937 31 1 3.9806 2.1759 -0.0240 32 1 5.9233 0.9022 -0.9964 33 1 5.5841 -0.0939 -2.4319 34 1 3.7264 -3.1537 -2.4235 35 1 5.0140 2.9734 -1.6694 36 1 4.6218 4.5620 -3.5076 37 1 1.8550 1.8435 -5.2818 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000071231050.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:30:32 Heat of formation + Delta-G solvation = -9.139772 kcal Electronic energy + Delta-G solvation = -24724.089210 eV Core-core repulsion = 20917.704262 eV Total energy + Delta-G solvation = -3806.384948 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 314.087 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.01904 -39.80947 -37.48632 -36.43038 -36.09199 -35.78460 -32.65225 -30.96283 -30.77930 -29.33921 -27.11711 -25.95673 -24.99847 -23.17243 -22.39643 -22.24520 -20.44646 -19.19736 -18.53861 -17.39298 -16.60779 -16.41129 -15.82748 -15.53584 -15.40353 -15.00450 -14.65428 -14.33511 -14.03915 -13.94187 -13.09862 -12.94482 -12.66370 -12.15192 -11.99398 -11.77552 -11.44497 -11.28923 -11.21133 -11.15217 -11.09226 -11.02908 -10.88826 -10.73993 -10.32712 -10.09336 -9.78771 -9.53928 -9.16707 -9.09114 -8.55947 -8.39889 -7.44948 -6.03592 -4.11205 0.00570 1.03741 1.51773 1.53083 2.69814 3.31752 3.37502 3.38556 3.41102 4.23067 4.37132 4.43604 4.56380 4.73159 5.01048 5.13915 5.39163 5.43503 5.45581 5.51288 5.61727 5.69623 5.71870 5.75367 5.85454 5.88745 5.99260 6.11151 6.31417 6.53053 6.56525 6.67365 7.08778 7.63844 7.75338 7.79748 7.95480 7.99240 8.38508 8.90631 9.57255 11.02507 Molecular weight = 314.09amu Principal moments of inertia in cm(-1) A = 0.016741 B = 0.004955 C = 0.004734 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1672.145695 B = 5649.858526 C = 5913.092260 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.349 6.349 3 C 0.070 3.930 4 C 0.067 3.933 5 N -0.472 5.472 6 C 0.197 3.803 7 C -0.537 4.537 8 H 0.054 0.946 9 C 0.101 3.899 10 N -0.829 5.829 11 Si 0.881 3.119 12 H -0.277 1.277 13 H -0.289 1.289 14 H -0.278 1.278 15 C 0.188 3.812 16 C -0.159 4.159 17 C -0.048 4.048 18 C -0.062 4.062 19 N 0.039 4.961 20 O -0.172 6.172 21 O -0.173 6.173 22 C -0.055 4.055 23 C -0.022 4.022 24 Cl 0.004 6.996 25 H 0.029 0.971 26 H 0.033 0.967 27 H 0.078 0.922 28 H 0.040 0.960 29 H 0.033 0.967 30 H 0.102 0.898 31 H 0.036 0.964 32 H -0.011 1.011 33 H 0.040 0.960 34 H 0.259 0.741 35 H 0.147 0.853 36 H 0.148 0.852 37 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.007 8.574 0.655 9.951 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.267 6.267 3 C -0.008 4.008 4 C -0.060 4.060 5 N -0.195 5.195 6 C 0.078 3.922 7 C -0.574 4.574 8 H 0.072 0.928 9 C -0.109 4.109 10 N -0.461 5.461 11 Si 0.708 3.292 12 H -0.203 1.203 13 H -0.215 1.215 14 H -0.203 1.203 15 C 0.090 3.910 16 C -0.180 4.180 17 C -0.068 4.068 18 C -0.146 4.146 19 N 0.555 4.445 20 O -0.386 6.386 21 O -0.387 6.387 22 C -0.075 4.075 23 C -0.051 4.051 24 Cl 0.034 6.966 25 H 0.047 0.953 26 H 0.051 0.949 27 H 0.097 0.903 28 H 0.058 0.942 29 H 0.051 0.949 30 H 0.120 0.880 31 H 0.053 0.947 32 H 0.007 0.993 33 H 0.058 0.942 34 H 0.069 0.931 35 H 0.164 0.836 36 H 0.166 0.834 37 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -5.227 7.242 0.981 8.985 hybrid contribution -0.061 0.211 0.369 0.429 sum -5.288 7.453 1.350 9.237 Atomic orbital electron populations 1.22638 0.83129 1.01927 0.98763 1.88200 1.17409 1.26168 1.94882 1.22516 0.94742 0.85415 0.98104 1.22087 0.92882 0.97344 0.93644 1.60727 1.29447 1.30595 0.98697 1.19865 0.80067 0.93716 0.98585 1.20752 1.32935 0.94029 1.09721 0.92765 1.24814 0.94109 0.97781 0.94237 1.69984 1.32002 1.26914 1.17241 0.86830 0.78427 0.82336 0.81562 1.20292 1.21523 1.20332 1.19696 0.88627 0.89362 0.93279 1.21886 1.02060 0.94635 0.99426 1.20868 0.94224 1.00570 0.91107 1.20750 1.08371 0.92646 0.92812 1.43551 0.98518 1.01092 1.01296 1.94517 1.31487 1.82415 1.30166 1.94498 1.49416 1.11501 1.83282 1.20778 0.98200 0.90333 0.98227 1.20932 0.97950 0.90878 0.95374 1.98442 1.74593 1.25700 1.97892 0.95285 0.94869 0.90305 0.94208 0.94911 0.87981 0.94657 0.99273 0.94158 0.93109 0.83561 0.83402 0.82789 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.47 11.01 101.05 1.11 1.58 16 2 O -0.35 -6.45 10.65 -35.23 -0.38 -6.83 16 3 C 0.07 1.12 6.07 37.16 0.23 1.34 16 4 C 0.07 1.16 5.09 -3.82 -0.02 1.14 16 5 N -0.47 -9.34 3.58 -172.43 -0.62 -9.95 16 6 C 0.20 4.40 4.39 -4.97 -0.02 4.38 16 7 C -0.54 -13.36 8.37 -34.44 -0.29 -13.65 16 8 H 0.05 1.35 7.83 -52.49 -0.41 0.94 16 9 C 0.10 2.56 5.38 -17.82 -0.10 2.47 16 10 N -0.83 -21.57 13.11 55.43 0.73 -20.85 16 11 Si 0.88 20.25 29.55 -169.99 -5.02 15.23 16 12 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 13 H -0.29 -6.70 7.11 56.52 0.40 -6.29 16 14 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 15 C 0.19 3.30 3.69 -83.73 -0.31 2.99 16 16 C -0.16 -2.32 8.59 -39.39 -0.34 -2.65 16 17 C -0.05 -0.65 9.55 -39.60 -0.38 -1.03 16 18 C -0.06 -0.95 6.85 -79.92 -0.55 -1.49 16 19 N 0.04 0.63 4.45 33.97 0.15 0.78 16 20 O -0.17 -2.86 18.44 -29.46 -0.54 -3.40 16 21 O -0.17 -2.80 18.44 -29.46 -0.54 -3.34 16 22 C -0.05 -0.86 9.33 -39.58 -0.37 -1.23 16 23 C -0.02 -0.38 6.34 -39.31 -0.25 -0.63 16 24 Cl 0.00 0.08 28.35 -51.86 -1.47 -1.39 16 25 H 0.03 0.35 8.14 -51.93 -0.42 -0.07 16 26 H 0.03 0.45 8.14 -51.93 -0.42 0.03 16 27 H 0.08 1.08 8.14 -51.93 -0.42 0.66 16 28 H 0.04 0.54 8.14 -51.93 -0.42 0.12 16 29 H 0.03 0.52 7.45 -51.93 -0.39 0.13 16 30 H 0.10 1.97 7.21 -51.93 -0.37 1.59 16 31 H 0.04 0.52 6.77 -51.93 -0.35 0.17 16 32 H -0.01 -0.22 7.87 -51.93 -0.41 -0.63 16 33 H 0.04 1.00 7.92 -51.93 -0.41 0.58 16 34 H 0.26 6.65 8.31 -40.82 -0.34 6.31 16 35 H 0.15 1.88 7.27 -52.49 -0.38 1.49 16 36 H 0.15 1.71 7.60 -52.49 -0.40 1.31 16 37 H 0.15 2.20 7.60 -52.49 -0.40 1.80 16 LS Contribution 340.95 15.07 5.14 5.14 Total: -1.00 -27.12 340.95 -8.18 -35.30 By element: Atomic # 1 Polarization: 0.45 SS G_CDS: -4.35 Total: -3.90 kcal Atomic # 6 Polarization: -5.51 SS G_CDS: -1.28 Total: -6.79 kcal Atomic # 7 Polarization: -30.28 SS G_CDS: 0.26 Total: -30.01 kcal Atomic # 8 Polarization: -12.11 SS G_CDS: -1.46 Total: -13.57 kcal Atomic # 14 Polarization: 20.25 SS G_CDS: -5.02 Total: 15.23 kcal Atomic # 17 Polarization: 0.08 SS G_CDS: -1.47 Total: -1.39 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -27.12 -8.18 -35.30 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000071231050.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.161 kcal (2) G-P(sol) polarization free energy of solvation -27.118 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.957 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.301 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.140 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds