Wall clock time and date at job start Tue Mar 31 2020 10:30:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.42899 * 113.99490 * 2 1 4 4 C 1.53004 * 109.47069 * 180.02562 * 3 2 1 5 5 N 1.46503 * 109.46883 * 65.00086 * 4 3 2 6 6 C 1.36946 * 119.99715 * 261.95130 * 5 4 3 7 7 H 1.07994 * 120.00016 * 186.15873 * 6 5 4 8 8 C 1.38810 * 119.99978 * 6.16544 * 6 5 4 9 9 N 1.31622 * 119.99955 * 15.49868 * 8 6 5 10 10 Si 1.86793 * 119.99898 * 195.49727 * 8 6 5 11 11 H 1.48500 * 109.47165 * 59.99994 * 10 8 6 12 12 H 1.48503 * 109.47047 * 180.02562 * 10 8 6 13 13 H 1.48500 * 109.47446 * 299.99783 * 10 8 6 14 14 C 1.46498 * 120.00380 * 81.95684 * 5 4 3 15 15 C 1.50693 * 109.47400 * 82.92461 * 14 5 4 16 16 C 1.38372 * 120.00610 * 86.01793 * 15 14 5 17 17 Cl 1.73596 * 120.01608 * 359.96132 * 16 15 14 18 18 C 1.38331 * 119.97185 * 179.97438 * 16 15 14 19 19 C 1.38236 * 119.99154 * 0.02562 * 18 16 15 20 20 C 1.38227 * 120.00979 * 359.97438 * 19 18 16 21 21 C 1.38194 * 120.00914 * 266.00244 * 15 14 5 22 22 N 1.48025 * 119.99138 * 0.02562 * 21 15 14 23 23 O 1.21797 * 119.99812 * 186.26896 * 22 21 15 24 24 O 1.21804 * 119.99794 * 6.26017 * 22 21 15 25 25 H 1.08997 * 109.47354 * 59.99987 * 1 2 3 26 26 H 1.09001 * 109.46704 * 180.02562 * 1 2 3 27 27 H 1.09003 * 109.46965 * 299.99423 * 1 2 3 28 28 H 1.08997 * 109.47188 * 59.99934 * 3 2 1 29 29 H 1.09001 * 109.47069 * 300.00141 * 3 2 1 30 30 H 1.08998 * 109.46745 * 305.00209 * 4 3 2 31 31 H 1.08998 * 109.47189 * 184.99454 * 4 3 2 32 32 H 0.97003 * 119.99614 * 180.02562 * 9 8 6 33 33 H 1.08998 * 109.46569 * 322.92584 * 14 5 4 34 34 H 1.09002 * 109.47112 * 202.92618 * 14 5 4 35 35 H 1.08010 * 120.00906 * 180.02562 * 18 16 15 36 36 H 1.07995 * 119.99444 * 179.97438 * 19 18 16 37 37 H 1.07995 * 119.98763 * 179.72248 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1848 -0.0006 5 7 3.9756 0.5646 -1.2528 6 6 4.2556 -0.7754 -1.2918 7 1 4.6743 -1.2138 -2.1855 8 6 4.0009 -1.5701 -0.1826 9 7 3.2239 -1.1246 0.7819 10 14 4.7610 -3.2719 -0.0587 11 1 6.2412 -3.1560 -0.0848 12 1 4.3364 -3.9124 1.2121 13 1 4.3091 -4.1006 -1.2051 14 6 4.1165 1.3778 -2.4632 15 6 5.4557 2.0687 -2.4512 16 6 6.5742 1.4185 -2.9421 17 17 6.4354 -0.1935 -3.5710 18 6 7.8030 2.0536 -2.9312 19 6 7.9132 3.3370 -2.4296 20 6 6.7955 3.9860 -1.9393 21 6 5.5670 3.3518 -1.9502 22 7 4.3706 4.0474 -1.4248 23 8 4.4439 5.2160 -1.0895 24 8 3.3129 3.4511 -1.3281 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 0.8901 28 1 1.6885 1.8464 0.8899 29 1 1.6885 1.8464 -0.8900 30 1 3.8514 0.5684 0.8409 31 1 3.9784 2.1767 0.0888 32 1 3.0462 -1.6799 1.5571 33 1 3.3228 2.1243 -2.4937 34 1 4.0463 0.7367 -3.3419 35 1 8.6764 1.5468 -3.3146 36 1 8.8726 3.8327 -2.4207 37 1 6.8828 4.9869 -1.5434 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000316494024.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:30:12 Heat of formation + Delta-G solvation = 44.426878 kcal Electronic energy + Delta-G solvation = -25547.351578 eV Core-core repulsion = 21743.289453 eV Total energy + Delta-G solvation = -3804.062124 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 314.087 amu Computer time = 1.70 seconds Orbital eigenvalues (eV) -41.29814 -38.86436 -37.13898 -36.06763 -35.80751 -35.23371 -32.55754 -31.08548 -30.60443 -28.74086 -26.51313 -25.42120 -25.16798 -23.28713 -22.01386 -21.60413 -20.22549 -18.25088 -17.74651 -17.32333 -16.84252 -15.94524 -15.49478 -15.20088 -14.75133 -14.70795 -14.59040 -13.90637 -13.86193 -13.49021 -13.18795 -12.88313 -12.13795 -11.85118 -11.66330 -11.49563 -11.46960 -11.29438 -11.18788 -11.00238 -10.77776 -10.61112 -10.49612 -10.35667 -10.11426 -9.98933 -9.57365 -9.43777 -8.93066 -8.84078 -8.45649 -8.28337 -7.31435 -6.13713 -3.08172 0.25645 1.39485 2.01260 2.23846 2.66600 3.15086 3.20175 3.22041 3.71819 4.09273 4.81390 4.98022 5.08785 5.13996 5.22094 5.29434 5.49924 5.63430 5.89947 6.03181 6.10702 6.12802 6.34810 6.37953 6.42901 6.48313 6.53637 6.59302 6.68061 6.78157 6.82160 6.92661 7.28048 7.40767 7.52752 7.89254 8.57474 8.67082 8.72341 9.24633 9.65889 10.63371 Molecular weight = 314.09amu Principal moments of inertia in cm(-1) A = 0.012084 B = 0.007580 C = 0.005184 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2316.594464 B = 3693.171056 C = 5400.025201 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.306 6.306 3 C 0.076 3.924 4 C 0.137 3.863 5 N -0.518 5.518 6 C -0.197 4.197 7 H 0.098 0.902 8 C -0.007 4.007 9 N -0.787 5.787 10 Si 0.912 3.088 11 H -0.277 1.277 12 H -0.283 1.283 13 H -0.276 1.276 14 C 0.145 3.855 15 C -0.064 4.064 16 C -0.008 4.008 17 Cl -0.055 7.055 18 C -0.105 4.105 19 C -0.136 4.136 20 C -0.060 4.060 21 C -0.055 4.055 22 N 0.055 4.945 23 O -0.252 6.252 24 O -0.202 6.202 25 H 0.018 0.982 26 H 0.065 0.935 27 H 0.018 0.982 28 H 0.019 0.981 29 H 0.031 0.969 30 H 0.125 0.875 31 H 0.029 0.971 32 H 0.266 0.734 33 H 0.100 0.900 34 H 0.069 0.931 35 H 0.132 0.868 36 H 0.135 0.865 37 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.669 2.869 -4.453 7.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.222 6.222 3 C -0.003 4.003 4 C 0.013 3.987 5 N -0.229 5.229 6 C -0.327 4.327 7 H 0.116 0.884 8 C -0.212 4.212 9 N -0.428 5.428 10 Si 0.739 3.261 11 H -0.203 1.203 12 H -0.208 1.208 13 H -0.202 1.202 14 C 0.019 3.981 15 C -0.077 4.077 16 C -0.036 4.036 17 Cl -0.026 7.026 18 C -0.128 4.128 19 C -0.157 4.157 20 C -0.080 4.080 21 C -0.148 4.148 22 N 0.535 4.465 23 O -0.438 6.438 24 O -0.395 6.395 25 H 0.036 0.964 26 H 0.084 0.916 27 H 0.037 0.963 28 H 0.038 0.962 29 H 0.049 0.951 30 H 0.142 0.858 31 H 0.047 0.953 32 H 0.077 0.923 33 H 0.117 0.883 34 H 0.087 0.913 35 H 0.150 0.850 36 H 0.153 0.847 37 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 4.906 2.224 -4.395 6.952 hybrid contribution -0.034 -0.495 0.327 0.595 sum 4.872 1.729 -4.067 6.578 Atomic orbital electron populations 1.22607 0.87029 1.00405 0.97564 1.88734 1.13540 1.25518 1.94418 1.22483 0.96324 0.84598 0.96863 1.21809 0.91197 0.95257 0.90476 1.44770 1.66028 1.04556 1.07513 1.20161 1.30418 0.82675 0.99444 0.88395 1.25198 0.98745 0.99937 0.97313 1.70060 1.28408 1.35836 1.08502 0.86168 0.79574 0.82431 0.77889 1.20306 1.20829 1.20207 1.20767 0.91329 0.95667 0.90386 1.20263 1.00993 0.89720 0.96689 1.20438 0.93854 0.87624 1.01653 1.98359 1.98080 1.21039 1.85093 1.21033 0.95745 0.95472 1.00559 1.20662 0.97930 0.94823 1.02250 1.20755 0.90408 1.00060 0.96824 1.20207 0.85666 0.94274 1.14666 1.43258 1.02160 1.00211 1.00877 1.94395 1.91853 1.01057 1.56449 1.94352 1.18147 1.66649 1.60316 0.96357 0.91619 0.96340 0.96244 0.95094 0.85839 0.95281 0.92262 0.88252 0.91306 0.85013 0.84724 0.84470 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 56. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.42 11.01 101.05 1.11 1.53 16 2 O -0.31 -7.01 7.40 -35.23 -0.26 -7.27 16 3 C 0.08 1.68 5.61 37.16 0.21 1.89 16 4 C 0.14 3.16 4.87 -4.04 -0.02 3.14 16 5 N -0.52 -11.78 2.47 -174.61 -0.43 -12.21 16 6 C -0.20 -4.64 9.22 -15.06 -0.14 -4.78 16 7 H 0.10 2.22 5.85 -52.49 -0.31 1.91 16 8 C -0.01 -0.17 5.16 -17.43 -0.09 -0.26 16 9 N -0.79 -19.14 6.74 55.49 0.37 -18.77 16 10 Si 0.91 19.11 29.58 -169.99 -5.03 14.08 16 11 H -0.28 -5.84 7.11 56.52 0.40 -5.44 16 12 H -0.28 -5.98 7.11 56.52 0.40 -5.57 16 13 H -0.28 -5.80 7.11 56.52 0.40 -5.40 16 14 C 0.15 2.99 4.92 -5.20 -0.03 2.96 16 15 C -0.06 -1.22 5.45 -104.59 -0.57 -1.79 16 16 C -0.01 -0.13 6.31 -39.50 -0.25 -0.38 16 17 Cl -0.05 -0.92 24.99 -51.86 -1.30 -2.22 16 18 C -0.11 -1.52 9.83 -39.55 -0.39 -1.91 16 19 C -0.14 -1.83 10.05 -39.59 -0.40 -2.23 16 20 C -0.06 -0.96 9.56 -39.58 -0.38 -1.34 16 21 C -0.05 -1.05 6.67 -79.95 -0.53 -1.59 16 22 N 0.06 1.15 4.13 33.96 0.14 1.29 16 23 O -0.25 -5.34 18.46 -29.46 -0.54 -5.88 16 24 O -0.20 -4.40 10.39 -29.46 -0.31 -4.71 16 25 H 0.02 0.32 8.14 -51.93 -0.42 -0.10 16 26 H 0.07 1.14 8.14 -51.93 -0.42 0.72 16 27 H 0.02 0.32 8.14 -51.93 -0.42 -0.11 16 28 H 0.02 0.42 8.14 -51.93 -0.42 -0.01 16 29 H 0.03 0.69 6.68 -51.93 -0.35 0.34 16 30 H 0.12 3.11 5.14 -52.07 -0.27 2.84 16 31 H 0.03 0.68 5.61 -51.93 -0.29 0.39 16 32 H 0.27 6.31 8.31 -40.82 -0.34 5.97 16 33 H 0.10 2.12 4.72 -52.36 -0.25 1.87 16 34 H 0.07 1.37 6.91 -51.93 -0.36 1.01 16 35 H 0.13 1.55 8.06 -52.48 -0.42 1.13 16 36 H 0.13 1.34 8.06 -52.49 -0.42 0.92 16 37 H 0.14 1.99 7.62 -52.49 -0.40 1.59 16 LS Contribution 313.70 15.07 4.73 4.73 Total: -1.00 -25.67 313.70 -7.99 -33.66 By element: Atomic # 1 Polarization: 5.95 SS G_CDS: -3.89 Total: 2.06 kcal Atomic # 6 Polarization: -3.29 SS G_CDS: -1.47 Total: -4.76 kcal Atomic # 7 Polarization: -29.76 SS G_CDS: 0.08 Total: -29.68 kcal Atomic # 8 Polarization: -16.76 SS G_CDS: -1.11 Total: -17.87 kcal Atomic # 14 Polarization: 19.11 SS G_CDS: -5.03 Total: 14.08 kcal Atomic # 17 Polarization: -0.92 SS G_CDS: -1.30 Total: -2.22 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -25.67 -7.99 -33.66 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000316494024.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.084 kcal (2) G-P(sol) polarization free energy of solvation -25.671 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.413 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.986 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.657 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.427 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.70 seconds