Wall clock time and date at job start Tue Mar 31 2020 10:27:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45196 * 109.47375 * 2 1 4 4 C 1.34231 * 117.00254 * 179.97438 * 3 2 1 5 5 O 1.20828 * 119.99850 * 0.02562 * 4 3 2 6 6 C 1.50699 * 120.00150 * 180.02562 * 4 3 2 7 7 C 1.53006 * 109.46866 * 180.02562 * 6 4 3 8 8 H 1.09000 * 109.47314 * 55.00220 * 7 6 4 9 9 C 1.50698 * 109.46914 * 174.99892 * 7 6 4 10 10 H 1.07997 * 120.00394 * 240.00350 * 9 7 6 11 11 C 1.37880 * 119.99838 * 59.99783 * 9 7 6 12 12 N 1.31510 * 120.00046 * 0.02562 * 11 9 7 13 13 Si 1.86799 * 119.99883 * 179.97438 * 11 9 7 14 14 H 1.48496 * 109.47207 * 90.00346 * 13 11 9 15 15 H 1.48508 * 109.47130 * 210.00145 * 13 11 9 16 16 H 1.48500 * 109.47432 * 330.00237 * 13 11 9 17 17 O 1.42899 * 109.46855 * 294.99874 * 7 6 4 18 18 C 1.35718 * 116.99396 * 150.00606 * 17 7 6 19 19 N 1.32323 * 120.12921 * 359.97438 * 18 17 7 20 20 N 1.28343 * 122.12038 * 180.02562 * 19 18 17 21 21 C 1.31923 * 122.24238 * 0.02562 * 20 19 18 22 22 Cl 1.73597 * 120.02803 * 180.02562 * 21 20 19 23 23 C 1.38864 * 119.94296 * 359.97438 * 21 20 19 24 24 C 1.38642 * 118.00888 * 359.73098 * 23 21 20 25 25 C 1.50694 * 121.03134 * 180.26470 * 24 23 21 26 26 H 1.09000 * 109.47303 * 59.99035 * 1 2 3 27 27 H 1.08998 * 109.47654 * 179.97438 * 1 2 3 28 28 H 1.09002 * 109.46566 * 300.00007 * 1 2 3 29 29 H 1.09001 * 109.47165 * 240.00455 * 2 1 3 30 30 H 1.08995 * 109.47409 * 120.00480 * 2 1 3 31 31 H 1.08993 * 109.47512 * 60.00512 * 6 4 3 32 32 H 1.09000 * 109.47247 * 300.00221 * 6 4 3 33 33 H 0.97000 * 120.00125 * 180.02562 * 12 11 9 34 34 H 1.08006 * 120.99271 * 179.97438 * 23 21 20 35 35 H 1.09000 * 109.47481 * 270.26560 * 25 24 23 36 36 H 1.09000 * 109.47587 * 30.26972 * 25 24 23 37 37 H 1.09004 * 109.47364 * 150.26906 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5865 0.0005 6 6 3.9208 2.9373 0.0012 7 6 5.4488 2.8571 0.0010 8 1 5.7807 2.2499 -0.8411 9 6 6.0245 4.2443 -0.1222 10 1 6.6592 4.4932 -0.9598 11 6 5.7409 5.1959 0.8344 12 7 4.9683 4.8929 1.8546 13 14 6.4551 6.9152 0.6820 14 1 5.5210 7.7726 -0.0910 15 1 6.6505 7.4920 2.0365 16 1 7.7617 6.8481 -0.0205 17 8 5.8946 2.2630 1.2218 18 6 7.0519 1.5556 1.1760 19 7 7.7144 1.4391 0.0365 20 7 8.8117 0.7790 -0.0505 21 6 9.3524 0.1724 0.9888 22 17 10.8394 -0.7044 0.8060 23 6 8.7315 0.2368 2.2292 24 6 7.5492 0.9540 2.3291 25 6 6.8217 1.0733 3.6434 26 1 -0.3634 0.5140 -0.8899 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3632 0.5139 0.8900 29 1 1.8933 -0.5138 -0.8900 30 1 1.8933 -0.5139 0.8899 31 1 3.5847 3.4692 0.8911 32 1 3.5852 3.4698 -0.8888 33 1 4.7685 5.5624 2.5274 34 1 9.1591 -0.2538 3.0912 35 1 6.1154 0.2492 3.7439 36 1 7.5410 1.0372 4.4615 37 1 6.2823 2.0200 3.6755 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001229165277.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:27:12 Heat of formation + Delta-G solvation = -82.282742 kcal Electronic energy + Delta-G solvation = -24351.001505 eV Core-core repulsion = 20541.444840 eV Total energy + Delta-G solvation = -3809.556666 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 314.087 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.61048 -39.82775 -37.62402 -36.42608 -35.94954 -34.13775 -33.25317 -31.64773 -30.98111 -30.01160 -27.77172 -26.38363 -24.07528 -23.16075 -22.47329 -21.71292 -20.01661 -18.14112 -17.28508 -17.14776 -16.23204 -16.18398 -15.89413 -15.54691 -15.13220 -14.70850 -14.05614 -13.74640 -13.42916 -13.25973 -12.89508 -12.81902 -12.70306 -12.46344 -12.23081 -12.04121 -11.85666 -11.55312 -11.37443 -11.24273 -11.20287 -11.07488 -10.91454 -10.77039 -10.57700 -10.19704 -9.81405 -9.70582 -9.51587 -9.42724 -8.92214 -8.79323 -7.92541 -6.32521 -4.49558 1.18535 1.52319 2.03166 2.93951 3.14296 3.23618 3.24843 3.30493 3.94515 4.04915 4.21460 4.73853 4.86969 5.01465 5.04474 5.10859 5.18893 5.23380 5.34192 5.42518 5.56253 5.85637 5.86512 5.91080 5.98544 6.03209 6.06401 6.24723 6.36159 6.50035 6.59742 6.81494 6.94614 7.23074 7.62643 7.85290 8.23818 8.44262 8.68897 9.21267 9.27226 10.69587 Molecular weight = 314.09amu Principal moments of inertia in cm(-1) A = 0.009119 B = 0.005660 C = 0.003937 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3069.638448 B = 4945.527430 C = 7111.140666 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.059 3.941 3 O -0.365 6.365 4 C 0.457 3.543 5 O -0.517 6.517 6 C -0.103 4.103 7 C 0.221 3.779 8 H 0.055 0.945 9 C -0.544 4.544 10 H 0.073 0.927 11 C 0.081 3.919 12 N -0.864 5.864 13 Si 0.897 3.103 14 H -0.275 1.275 15 H -0.284 1.284 16 H -0.271 1.271 17 O -0.262 6.262 18 C 0.314 3.686 19 N -0.273 5.273 20 N -0.200 5.200 21 C 0.056 3.944 22 Cl -0.036 7.036 23 C -0.090 4.090 24 C -0.104 4.104 25 C -0.101 4.101 26 H 0.064 0.936 27 H 0.073 0.927 28 H 0.065 0.935 29 H 0.063 0.937 30 H 0.064 0.936 31 H 0.141 0.859 32 H 0.106 0.894 33 H 0.268 0.732 34 H 0.151 0.849 35 H 0.073 0.927 36 H 0.067 0.933 37 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.080 -8.080 2.886 8.829 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.015 4.015 3 O -0.283 6.283 4 C 0.301 3.699 5 O -0.405 6.405 6 C -0.141 4.141 7 C 0.167 3.833 8 H 0.073 0.927 9 C -0.581 4.581 10 H 0.091 0.909 11 C -0.125 4.125 12 N -0.500 5.500 13 Si 0.724 3.276 14 H -0.201 1.201 15 H -0.209 1.209 16 H -0.195 1.195 17 O -0.162 6.162 18 C 0.128 3.872 19 N -0.133 5.133 20 N -0.046 5.046 21 C -0.118 4.118 22 Cl -0.009 7.009 23 C -0.118 4.118 24 C -0.117 4.117 25 C -0.158 4.158 26 H 0.083 0.917 27 H 0.092 0.908 28 H 0.084 0.916 29 H 0.082 0.918 30 H 0.082 0.918 31 H 0.158 0.842 32 H 0.124 0.876 33 H 0.078 0.922 34 H 0.169 0.831 35 H 0.092 0.908 36 H 0.086 0.914 37 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -2.064 -7.914 1.670 8.347 hybrid contribution 0.525 0.334 1.321 1.460 sum -1.539 -7.579 2.990 8.292 Atomic orbital electron populations 1.21778 0.93237 1.02358 1.03357 1.22859 0.94895 0.81725 1.02033 1.86575 1.26047 1.31032 1.84674 1.24909 0.79545 0.94284 0.71148 1.90601 1.60250 1.43671 1.45932 1.21896 0.96487 0.88210 1.07471 1.19937 0.88290 0.93088 0.81977 0.92689 1.21420 1.32186 0.94161 1.10340 0.90929 1.25103 0.93774 0.99192 0.94451 1.69842 1.34545 1.34627 1.10967 0.86496 0.79996 0.83408 0.77707 1.20051 1.20917 1.19508 1.86493 1.30625 1.59132 1.39980 1.21467 0.88647 0.87105 0.89951 1.73278 1.02351 1.15434 1.22250 1.72592 1.03647 1.02514 1.25847 1.23021 0.93190 1.02498 0.93102 1.98349 1.30903 1.73533 1.98081 1.21753 0.94362 0.98334 0.97326 1.20409 0.95862 0.98578 0.96840 1.20618 0.99654 1.04435 0.91123 0.91666 0.90820 0.91590 0.91842 0.91796 0.84181 0.87578 0.92202 0.83101 0.90817 0.91444 0.89105 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.58 10.29 37.16 0.38 -1.19 16 2 C 0.06 0.85 6.19 37.16 0.23 1.08 16 3 O -0.37 -6.55 10.22 -39.26 -0.40 -6.95 16 4 C 0.46 9.45 7.84 36.01 0.28 9.73 16 5 O -0.52 -11.81 15.17 -24.06 -0.36 -12.18 16 6 C -0.10 -2.24 5.22 -27.88 -0.15 -2.38 16 7 C 0.22 5.37 1.60 -27.88 -0.04 5.32 16 8 H 0.06 1.40 6.82 -51.93 -0.35 1.04 16 9 C -0.54 -13.98 8.90 -34.44 -0.31 -14.29 16 10 H 0.07 1.91 7.81 -52.49 -0.41 1.50 16 11 C 0.08 2.04 5.24 -17.82 -0.09 1.95 16 12 N -0.86 -21.75 10.93 55.43 0.61 -21.15 16 13 Si 0.90 19.82 29.54 -169.99 -5.02 14.80 16 14 H -0.27 -5.93 7.11 56.52 0.40 -5.53 16 15 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 16 H -0.27 -6.13 7.11 56.52 0.40 -5.72 16 17 O -0.26 -6.36 7.57 -33.31 -0.25 -6.61 16 18 C 0.31 7.18 7.51 -16.97 -0.13 7.05 16 19 N -0.27 -6.47 9.83 30.50 0.30 -6.17 16 20 N -0.20 -4.31 11.48 32.89 0.38 -3.93 16 21 C 0.06 1.01 7.36 -17.28 -0.13 0.88 16 22 Cl -0.04 -0.53 29.13 -51.86 -1.51 -2.04 16 23 C -0.09 -1.46 9.71 -39.20 -0.38 -1.84 16 24 C -0.10 -1.95 5.94 -104.10 -0.62 -2.57 16 25 C -0.10 -1.58 9.86 36.00 0.36 -1.22 16 26 H 0.06 0.66 8.14 -51.93 -0.42 0.23 16 27 H 0.07 0.60 8.14 -51.93 -0.42 0.18 16 28 H 0.07 0.68 8.14 -51.93 -0.42 0.26 16 29 H 0.06 0.89 8.13 -51.93 -0.42 0.47 16 30 H 0.06 0.92 8.13 -51.93 -0.42 0.50 16 31 H 0.14 3.24 6.22 -51.93 -0.32 2.92 16 32 H 0.11 2.11 8.14 -51.93 -0.42 1.69 16 33 H 0.27 6.44 8.31 -40.82 -0.34 6.10 16 34 H 0.15 1.83 8.06 -52.48 -0.42 1.41 16 35 H 0.07 1.06 8.14 -51.93 -0.42 0.63 16 36 H 0.07 0.83 8.11 -51.93 -0.42 0.41 16 37 H 0.09 1.63 7.63 -51.93 -0.40 1.23 16 LS Contribution 340.80 15.07 5.14 5.14 Total: -1.00 -28.97 340.80 -6.15 -35.11 By element: Atomic # 1 Polarization: 5.88 SS G_CDS: -4.42 Total: 1.46 kcal Atomic # 6 Polarization: 3.11 SS G_CDS: -0.59 Total: 2.51 kcal Atomic # 7 Polarization: -32.53 SS G_CDS: 1.28 Total: -31.25 kcal Atomic # 8 Polarization: -24.72 SS G_CDS: -1.02 Total: -25.74 kcal Atomic # 14 Polarization: 19.82 SS G_CDS: -5.02 Total: 14.80 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -1.51 Total: -2.04 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -28.97 -6.15 -35.11 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001229165277.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.171 kcal (2) G-P(sol) polarization free energy of solvation -28.966 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.137 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.146 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.112 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.283 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds