Wall clock time and date at job start Tue Mar 31 2020 10:19:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52991 * 109.47178 * 2 1 4 4 H 1.09002 * 109.47157 * 304.51347 * 3 2 1 5 5 C 1.50699 * 109.47206 * 184.51535 * 3 2 1 6 6 H 1.08004 * 120.00347 * 245.62441 * 5 3 2 7 7 C 1.37881 * 120.00173 * 65.62249 * 5 3 2 8 8 N 1.31510 * 120.00258 * 195.78829 * 7 5 3 9 9 Si 1.86800 * 119.99770 * 15.78895 * 7 5 3 10 10 H 1.48498 * 109.47334 * 180.02562 * 9 7 5 11 11 H 1.48501 * 109.47050 * 299.99962 * 9 7 5 12 12 H 1.48497 * 109.47480 * 59.99908 * 9 7 5 13 13 O 1.45199 * 109.47308 * 64.51367 * 3 2 1 14 14 C 1.34232 * 117.00062 * 270.00013 * 13 3 2 15 15 O 1.20825 * 119.99721 * 359.97438 * 14 13 3 16 16 C 1.50698 * 119.99837 * 179.97438 * 14 13 3 17 17 C 1.53004 * 109.46878 * 179.97438 * 16 14 13 18 18 C 1.50698 * 109.46878 * 179.97438 * 17 16 14 19 19 C 1.38269 * 119.97759 * 269.72320 * 18 17 16 20 20 C 1.38213 * 120.06211 * 179.76988 * 19 18 17 21 21 C 1.38317 * 120.01178 * 0.50746 * 20 19 18 22 22 Cl 1.73606 * 120.02456 * 179.72523 * 21 20 19 23 23 C 1.38548 * 119.95227 * 359.74588 * 21 20 19 24 24 F 1.35104 * 120.03074 * 180.02562 * 23 21 20 25 25 C 1.38203 * 119.97630 * 90.00200 * 18 17 16 26 26 H 1.09001 * 109.47481 * 180.02562 * 1 2 3 27 27 H 1.09005 * 109.47387 * 300.00153 * 1 2 3 28 28 H 1.09005 * 109.47269 * 60.00199 * 1 2 3 29 29 H 1.09002 * 109.46897 * 239.99885 * 2 1 3 30 30 H 1.08996 * 109.46881 * 120.00217 * 2 1 3 31 31 H 0.97000 * 120.00250 * 354.87661 * 8 7 5 32 32 H 1.09000 * 109.47411 * 299.99911 * 16 14 13 33 33 H 1.09008 * 109.47165 * 60.00013 * 16 14 13 34 34 H 1.08995 * 109.47174 * 299.99692 * 17 16 14 35 35 H 1.08997 * 109.46832 * 60.00430 * 17 16 14 36 36 H 1.07995 * 119.96449 * 0.02698 * 19 18 17 37 37 H 1.07999 * 119.99175 * 180.23876 * 20 19 18 38 38 H 1.07998 * 120.00155 * 359.95300 * 25 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 1 1.6121 1.9791 -0.8468 5 6 3.5428 1.4439 -0.1119 6 1 4.1450 1.8079 0.7075 7 6 4.1492 0.9804 -1.2602 8 7 5.4313 0.6878 -1.2547 9 14 3.1494 0.7682 -2.8238 10 1 4.0278 0.2598 -3.9078 11 1 2.0513 -0.2017 -2.5814 12 1 2.5741 2.0771 -3.2251 13 8 1.6460 2.0951 1.2357 14 6 0.4627 2.7289 1.2397 15 8 -0.2209 2.7384 0.2435 16 6 -0.0130 3.4287 2.4868 17 6 -1.3791 4.0658 2.2244 18 6 -1.8550 4.7650 3.4716 19 6 -2.6170 4.0797 4.3998 20 6 -3.0505 4.7179 5.5466 21 6 -2.7311 6.0463 5.7618 22 17 -3.2814 6.8503 7.1987 23 6 -1.9721 6.7351 4.8296 24 9 -1.6588 8.0326 5.0384 25 6 -1.5345 6.0925 3.6841 26 1 -0.3634 -1.0277 0.0005 27 1 -0.3634 0.5139 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 1.8933 -0.5139 -0.8900 30 1 1.8933 -0.5139 0.8899 31 1 5.9665 0.8676 -0.4659 32 1 -0.0984 2.7064 3.2986 33 1 0.7019 4.2037 2.7637 34 1 -1.2931 4.7883 1.4128 35 1 -2.0940 3.2912 1.9473 36 1 -2.8701 3.0435 4.2305 37 1 -3.6423 4.1803 6.2726 38 1 -0.9425 6.6282 2.9568 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000860695496.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:19:06 Heat of formation + Delta-G solvation = -134.822681 kcal Electronic energy + Delta-G solvation = -23031.637977 eV Core-core repulsion = 19199.883047 eV Total energy + Delta-G solvation = -3831.754930 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 314.087 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -49.27745 -40.11919 -39.52266 -37.04018 -36.21551 -34.06420 -33.57133 -31.93993 -31.16214 -29.98157 -27.62215 -25.32953 -23.39981 -22.57289 -21.93369 -20.78402 -19.56695 -17.97971 -17.75950 -17.12425 -17.00307 -16.68828 -16.10759 -16.00494 -15.57067 -14.64113 -14.28657 -14.08538 -13.85421 -13.53613 -13.38704 -13.31939 -12.79091 -12.65753 -12.58425 -12.45651 -12.18552 -11.77211 -11.64027 -11.52275 -11.33083 -11.26817 -11.17022 -10.95519 -10.56112 -10.05880 -9.94571 -9.67750 -9.54162 -9.38274 -8.97048 -8.88358 -8.41627 -6.67113 -4.28503 0.52546 0.67902 1.62245 2.78532 2.96732 3.28177 3.36202 3.43890 3.52884 3.69461 4.20445 4.33052 4.38295 4.65336 4.75136 4.86566 4.95821 5.06898 5.14485 5.34443 5.45841 5.48931 5.59110 5.62655 5.68763 5.85551 5.92080 5.92892 6.04165 6.09996 6.29635 6.41193 6.58294 6.73921 6.79201 7.14746 7.35689 7.78744 8.20761 8.43879 8.80328 9.39936 10.75743 Molecular weight = 314.09amu Principal moments of inertia in cm(-1) A = 0.029536 B = 0.002467 C = 0.002396 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 947.755112 B =11347.991276 C =11683.684156 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.149 4.149 3 C 0.201 3.799 4 H 0.039 0.961 5 C -0.607 4.607 6 H 0.068 0.932 7 C 0.039 3.961 8 N -0.894 5.894 9 Si 1.037 2.963 10 H -0.279 1.279 11 H -0.269 1.269 12 H -0.278 1.278 13 O -0.344 6.344 14 C 0.450 3.550 15 O -0.520 6.520 16 C -0.112 4.112 17 C -0.072 4.072 18 C -0.042 4.042 19 C -0.113 4.113 20 C -0.080 4.080 21 C -0.081 4.081 22 Cl -0.054 7.054 23 C 0.112 3.888 24 F -0.127 7.127 25 C -0.138 4.138 26 H 0.040 0.960 27 H 0.041 0.959 28 H 0.054 0.946 29 H 0.079 0.921 30 H 0.061 0.939 31 H 0.271 0.729 32 H 0.102 0.898 33 H 0.103 0.897 34 H 0.089 0.911 35 H 0.090 0.910 36 H 0.142 0.858 37 H 0.144 0.856 38 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.285 8.288 13.328 24.097 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.187 4.187 3 C 0.147 3.853 4 H 0.056 0.944 5 C -0.645 4.645 6 H 0.086 0.914 7 C -0.168 4.168 8 N -0.527 5.527 9 Si 0.864 3.136 10 H -0.205 1.205 11 H -0.195 1.195 12 H -0.204 1.204 13 O -0.260 6.260 14 C 0.293 3.707 15 O -0.410 6.410 16 C -0.150 4.150 17 C -0.109 4.109 18 C -0.043 4.043 19 C -0.131 4.131 20 C -0.099 4.099 21 C -0.108 4.108 22 Cl -0.025 7.025 23 C 0.092 3.908 24 F -0.105 7.105 25 C -0.157 4.157 26 H 0.059 0.941 27 H 0.060 0.940 28 H 0.074 0.926 29 H 0.097 0.903 30 H 0.080 0.920 31 H 0.082 0.918 32 H 0.120 0.880 33 H 0.121 0.879 34 H 0.108 0.892 35 H 0.109 0.891 36 H 0.160 0.840 37 H 0.161 0.839 38 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -18.357 7.848 11.581 23.080 hybrid contribution -0.028 0.892 1.816 2.023 sum -18.385 8.741 13.397 24.369 Atomic orbital electron populations 1.21899 0.97427 0.99811 1.01394 1.22447 0.93805 0.99429 1.03019 1.20918 0.96181 0.88049 0.80143 0.94382 1.21949 0.88711 1.49193 1.04626 0.91404 1.25674 0.97391 0.92630 1.01056 1.70861 1.07214 1.40726 1.33924 0.84170 0.75588 0.77787 0.76023 1.20466 1.19486 1.20425 1.86539 1.34225 1.62178 1.43019 1.23325 0.80719 0.76981 0.89628 1.90605 1.56052 1.58885 1.35507 1.21309 0.97166 1.01013 0.95526 1.20474 0.95964 1.00566 0.93921 1.19878 0.95357 0.92772 0.96266 1.21175 0.98062 1.00861 0.93046 1.20983 0.99170 0.91577 0.98122 1.21015 1.03866 0.94787 0.91174 1.98389 1.88347 1.79557 1.36255 1.17397 0.98937 0.79353 0.95117 1.91551 1.90991 1.33188 1.94817 1.21124 1.02379 0.95411 0.96794 0.94077 0.94038 0.92644 0.90261 0.92017 0.91823 0.87954 0.87905 0.89243 0.89148 0.84033 0.83859 0.83470 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.78 8.56 37.16 0.32 -2.46 16 2 C -0.15 -3.29 5.32 -26.74 -0.14 -3.43 16 3 C 0.20 4.91 1.84 -27.89 -0.05 4.86 16 4 H 0.04 0.97 5.84 -51.93 -0.30 0.67 16 5 C -0.61 -17.06 9.17 -34.44 -0.32 -17.38 16 6 H 0.07 2.05 8.06 -52.48 -0.42 1.63 16 7 C 0.04 1.09 5.33 -17.82 -0.10 1.00 16 8 N -0.89 -26.70 13.69 55.43 0.76 -25.94 16 9 Si 1.04 24.56 26.27 -169.99 -4.47 20.10 16 10 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 11 H -0.27 -5.84 5.61 56.52 0.32 -5.52 16 12 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 13 O -0.34 -7.56 9.80 -39.26 -0.38 -7.94 16 14 C 0.45 8.07 6.39 36.00 0.23 8.30 16 15 O -0.52 -10.25 13.13 -18.75 -0.25 -10.49 16 16 C -0.11 -1.34 5.79 -27.88 -0.16 -1.51 16 17 C -0.07 -0.72 4.64 -27.88 -0.13 -0.85 16 18 C -0.04 -0.37 5.13 -104.62 -0.54 -0.91 16 19 C -0.11 -0.85 9.70 -39.58 -0.38 -1.23 16 20 C -0.08 -0.60 9.83 -39.56 -0.39 -0.99 16 21 C -0.08 -0.75 6.33 -39.44 -0.25 -1.00 16 22 Cl -0.05 -0.49 28.62 -51.86 -1.48 -1.98 16 23 C 0.11 1.12 7.28 -39.39 -0.29 0.84 16 24 F -0.13 -1.41 16.84 2.25 0.04 -1.37 16 25 C -0.14 -1.26 9.68 -39.52 -0.38 -1.65 16 26 H 0.04 0.67 8.14 -51.93 -0.42 0.24 16 27 H 0.04 0.74 6.07 -51.93 -0.32 0.43 16 28 H 0.05 1.07 7.77 -51.93 -0.40 0.66 16 29 H 0.08 1.80 4.67 -51.93 -0.24 1.56 16 30 H 0.06 1.34 8.14 -51.93 -0.42 0.92 16 31 H 0.27 8.05 8.73 -40.82 -0.36 7.69 16 32 H 0.10 1.05 8.14 -51.93 -0.42 0.62 16 33 H 0.10 1.13 8.14 -51.92 -0.42 0.71 16 34 H 0.09 0.94 8.04 -51.93 -0.42 0.52 16 35 H 0.09 0.89 8.04 -51.93 -0.42 0.47 16 36 H 0.14 0.80 8.06 -52.49 -0.42 0.38 16 37 H 0.14 0.78 8.06 -52.49 -0.42 0.36 16 38 H 0.15 1.19 8.06 -52.49 -0.42 0.76 16 LS Contribution 337.12 15.07 5.08 5.08 Total: -1.00 -31.02 337.12 -8.00 -39.02 By element: Atomic # 1 Polarization: 4.65 SS G_CDS: -4.72 Total: -0.07 kcal Atomic # 6 Polarization: -13.83 SS G_CDS: -2.58 Total: -16.41 kcal Atomic # 7 Polarization: -26.70 SS G_CDS: 0.76 Total: -25.94 kcal Atomic # 8 Polarization: -17.81 SS G_CDS: -0.63 Total: -18.44 kcal Atomic # 9 Polarization: -1.41 SS G_CDS: 0.04 Total: -1.37 kcal Atomic # 14 Polarization: 24.56 SS G_CDS: -4.47 Total: 20.10 kcal Atomic # 17 Polarization: -0.49 SS G_CDS: -1.48 Total: -1.98 kcal Total LS contribution 5.08 Total: 5.08 kcal Total: -31.02 -8.00 -39.02 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000860695496.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.802 kcal (2) G-P(sol) polarization free energy of solvation -31.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.825 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.997 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.020 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.823 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds