Wall clock time and date at job start Tue Mar 31 2020 10:31:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 H 1.09002 * 109.47288 * 2 1 4 4 N 1.46500 * 109.47183 * 239.99835 * 2 1 3 5 5 C 1.39737 * 119.99960 * 85.00107 * 4 2 1 6 6 C 1.38926 * 120.04868 * 359.97438 * 5 4 2 7 7 C 1.38112 * 119.98832 * 180.02562 * 6 5 4 8 8 C 1.38352 * 120.08290 * 359.74191 * 7 6 5 9 9 Cl 1.73598 * 119.95040 * 180.27739 * 8 7 6 10 10 C 1.38591 * 120.09773 * 0.51036 * 8 7 6 11 11 F 1.35104 * 119.99093 * 179.76496 * 10 8 7 12 12 C 1.38327 * 120.01561 * 359.49264 * 10 8 7 13 13 C 1.50705 * 109.47258 * 120.00018 * 2 1 3 14 14 O 1.21276 * 119.99888 * 120.00375 * 13 2 1 15 15 N 1.34770 * 119.99641 * 299.99840 * 13 2 1 16 16 C 1.46498 * 120.00360 * 0.02562 * 15 13 2 17 17 C 1.46507 * 119.99825 * 179.97438 * 15 13 2 18 18 C 1.50702 * 109.47033 * 90.00188 * 17 15 13 19 19 H 1.07996 * 120.00101 * 0.02562 * 18 17 15 20 20 C 1.37878 * 119.99894 * 179.97438 * 18 17 15 21 21 N 1.31517 * 119.99794 * 0.02562 * 20 18 17 22 22 Si 1.86799 * 119.99963 * 179.97438 * 20 18 17 23 23 H 1.48506 * 109.46955 * 0.02562 * 22 20 18 24 24 H 1.48505 * 109.46725 * 120.00053 * 22 20 18 25 25 H 1.48497 * 109.47316 * 240.00332 * 22 20 18 26 26 H 1.08997 * 109.46862 * 180.02562 * 1 2 3 27 27 H 1.08995 * 109.46873 * 299.99852 * 1 2 3 28 28 H 1.09000 * 109.46659 * 60.00145 * 1 2 3 29 29 H 0.96993 * 120.00292 * 264.99833 * 4 2 1 30 30 H 1.08007 * 120.00971 * 0.03987 * 6 5 4 31 31 H 1.07999 * 119.96227 * 180.02562 * 7 6 5 32 32 H 1.07995 * 120.04400 * 180.23130 * 12 10 8 33 33 H 1.08997 * 109.47534 * 89.99465 * 16 15 13 34 34 H 1.09004 * 109.47560 * 209.99646 * 16 15 13 35 35 H 1.08996 * 109.47352 * 329.99588 * 16 15 13 36 36 H 1.09000 * 109.46944 * 210.00408 * 17 15 13 37 37 H 1.08995 * 109.46830 * 329.99959 * 17 15 13 38 38 H 0.97005 * 119.99436 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 7 2.0184 -0.6906 -1.1961 5 6 2.1518 0.0064 -2.3999 6 6 1.8212 1.3543 -2.4635 7 6 1.9531 2.0419 -3.6540 8 6 2.4193 1.3915 -4.7826 9 17 2.5906 2.2609 -6.2754 10 6 2.7452 0.0457 -4.7244 11 9 3.1958 -0.5885 -5.8290 12 6 2.6146 -0.6470 -3.5342 13 6 2.0324 -0.7104 1.2305 14 8 2.7297 -1.6964 1.1192 15 7 1.7068 -0.2499 2.4545 16 6 0.8641 0.9409 2.5889 17 6 2.1947 -0.9408 3.6507 18 6 3.5224 -0.3579 4.0611 19 1 3.9589 0.4470 3.4885 20 6 4.1794 -0.8514 5.1683 21 7 3.6475 -1.8313 5.8659 22 14 5.8255 -0.1293 5.6766 23 1 6.2033 0.9537 4.7334 24 1 5.7196 0.4256 7.0500 25 1 6.8617 -1.1927 5.6508 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 2.2491 -1.6317 -1.1526 30 1 1.4613 1.8644 -1.5822 31 1 1.6964 3.0898 -3.7030 32 1 2.8720 -1.6948 -3.4873 33 1 -0.1837 0.6426 2.6224 34 1 1.1218 1.4665 3.5084 35 1 1.0272 1.5996 1.7360 36 1 1.4766 -0.8153 4.4611 37 1 2.3154 -2.0021 3.4335 38 1 4.1100 -2.1788 6.6447 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000112530572.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:31:58 Heat of formation + Delta-G solvation = -51.804565 kcal Electronic energy + Delta-G solvation = -23340.130699 eV Core-core repulsion = 19544.268456 eV Total energy + Delta-G solvation = -3795.862243 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 314.094 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -49.08043 -40.13626 -39.02300 -36.79853 -35.50130 -35.09987 -32.85544 -31.68766 -30.56518 -28.50192 -27.62226 -26.29368 -24.30290 -23.40730 -22.80233 -21.40807 -19.01547 -18.31932 -17.16372 -16.69507 -16.60746 -16.40376 -15.88305 -15.77303 -15.22066 -14.94536 -14.66000 -14.08173 -13.98625 -13.86965 -13.47340 -13.22998 -13.03717 -12.65513 -12.39924 -12.30157 -12.18123 -12.04745 -11.85522 -11.51911 -11.44140 -11.22775 -11.00240 -10.95358 -10.68993 -10.25701 -10.04952 -9.72669 -9.13441 -9.10025 -8.53016 -7.85233 -7.64948 -6.14014 -4.19299 0.93110 1.06195 2.00060 2.98850 3.12102 3.24043 3.32323 3.35970 3.37024 3.79504 4.04103 4.36654 4.47462 4.70504 4.79332 4.97243 5.02918 5.06289 5.12978 5.21150 5.39988 5.51268 5.58704 5.60243 5.72047 5.75400 5.87779 5.95799 5.97903 6.14181 6.38029 6.82290 7.03478 7.28340 7.36244 7.53893 7.81520 8.10971 8.18885 8.71658 8.88342 9.46356 10.94178 Molecular weight = 314.09amu Principal moments of inertia in cm(-1) A = 0.020890 B = 0.002768 C = 0.002676 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1340.046818 B =10113.379939 C =10461.721179 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.125 3.875 3 H 0.103 0.897 4 N -0.712 5.712 5 C 0.263 3.737 6 C -0.203 4.203 7 C -0.030 4.030 8 C -0.141 4.141 9 Cl -0.068 7.068 10 C 0.161 3.839 11 F -0.129 7.129 12 C -0.227 4.227 13 C 0.501 3.499 14 O -0.536 6.536 15 N -0.594 5.594 16 C 0.077 3.923 17 C 0.245 3.755 18 C -0.529 4.529 19 H 0.058 0.942 20 C 0.062 3.938 21 N -0.894 5.894 22 Si 0.899 3.101 23 H -0.273 1.273 24 H -0.283 1.283 25 H -0.282 1.282 26 H 0.064 0.936 27 H 0.085 0.915 28 H 0.067 0.933 29 H 0.414 0.586 30 H 0.138 0.862 31 H 0.141 0.859 32 H 0.143 0.857 33 H 0.052 0.948 34 H 0.077 0.923 35 H 0.059 0.941 36 H 0.035 0.965 37 H 0.044 0.956 38 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.365 8.391 -17.525 21.155 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.016 3.984 3 H 0.120 0.880 4 N -0.340 5.340 5 C 0.155 3.845 6 C -0.226 4.226 7 C -0.050 4.050 8 C -0.171 4.171 9 Cl -0.039 7.039 10 C 0.140 3.860 11 F -0.107 7.107 12 C -0.251 4.251 13 C 0.286 3.714 14 O -0.413 6.413 15 N -0.326 5.326 16 C -0.067 4.067 17 C 0.126 3.874 18 C -0.568 4.568 19 H 0.076 0.924 20 C -0.141 4.141 21 N -0.532 5.532 22 Si 0.726 3.274 23 H -0.198 1.198 24 H -0.209 1.209 25 H -0.208 1.208 26 H 0.083 0.917 27 H 0.103 0.897 28 H 0.086 0.914 29 H 0.252 0.748 30 H 0.156 0.844 31 H 0.158 0.842 32 H 0.160 0.840 33 H 0.070 0.930 34 H 0.096 0.904 35 H 0.078 0.922 36 H 0.053 0.947 37 H 0.063 0.937 38 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -8.002 7.877 -17.349 20.666 hybrid contribution 1.147 0.008 0.146 1.156 sum -6.855 7.885 -17.203 20.128 Atomic orbital electron populations 1.22481 0.93499 1.03756 1.03697 1.20884 0.95235 0.97481 0.84787 0.87970 1.44642 1.70366 1.13359 1.05597 1.17551 0.90320 0.91044 0.85537 1.20711 1.10106 0.92949 0.98864 1.20643 0.94590 0.99917 0.89807 1.20580 1.14747 0.91714 0.90054 1.98350 1.96829 1.76048 1.32683 1.16990 0.97117 0.88790 0.83078 1.91526 1.86249 1.81912 1.51026 1.20399 1.12129 1.01755 0.90777 1.20171 0.81340 0.85368 0.84492 1.90680 1.37894 1.26820 1.85922 1.48094 1.49256 1.28143 1.07067 1.21872 0.93937 0.88015 1.02850 1.19358 0.94431 0.93705 0.79910 1.21434 1.04795 1.19229 1.11326 0.92376 1.24940 0.98022 0.94904 0.96204 1.69939 1.38984 1.25980 1.18335 0.86430 0.83595 0.79086 0.78245 1.19772 1.20878 1.20808 0.91662 0.89690 0.91398 0.74796 0.84443 0.84169 0.83959 0.92979 0.90426 0.92232 0.94687 0.93748 0.92658 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -1.77 9.06 37.16 0.34 -1.43 16 2 C 0.13 1.61 1.87 -69.08 -0.13 1.48 16 3 H 0.10 1.17 5.74 -51.93 -0.30 0.87 16 4 N -0.71 -9.07 5.13 -53.28 -0.27 -9.34 16 5 C 0.26 3.03 6.64 -83.77 -0.56 2.48 16 6 C -0.20 -2.02 8.85 -39.37 -0.35 -2.37 16 7 C -0.03 -0.29 9.82 -39.59 -0.39 -0.67 16 8 C -0.14 -1.56 6.33 -39.41 -0.25 -1.81 16 9 Cl -0.07 -0.72 28.61 -51.86 -1.48 -2.20 16 10 C 0.16 1.92 7.27 -39.42 -0.29 1.63 16 11 F -0.13 -1.62 16.83 2.25 0.04 -1.58 16 12 C -0.23 -2.61 9.87 -39.32 -0.39 -3.00 16 13 C 0.50 9.34 7.14 -10.99 -0.08 9.27 16 14 O -0.54 -12.37 15.42 5.56 0.09 -12.28 16 15 N -0.59 -11.37 2.86 -182.95 -0.52 -11.90 16 16 C 0.08 1.04 8.80 59.85 0.53 1.57 16 17 C 0.24 6.05 5.16 -5.19 -0.03 6.02 16 18 C -0.53 -14.43 9.39 -34.44 -0.32 -14.76 16 19 H 0.06 1.59 7.81 -52.49 -0.41 1.18 16 20 C 0.06 1.71 5.46 -17.82 -0.10 1.62 16 21 N -0.89 -25.85 13.29 55.43 0.74 -25.12 16 22 Si 0.90 21.35 29.54 -169.99 -5.02 16.33 16 23 H -0.27 -6.41 7.11 56.52 0.40 -6.00 16 24 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 25 H -0.28 -6.74 7.11 56.52 0.40 -6.33 16 26 H 0.06 0.72 8.14 -51.93 -0.42 0.30 16 27 H 0.08 0.76 4.53 -51.93 -0.24 0.53 16 28 H 0.07 0.57 7.71 -51.93 -0.40 0.17 16 29 H 0.41 5.66 7.80 -40.82 -0.32 5.34 16 30 H 0.14 1.14 6.11 -52.48 -0.32 0.81 16 31 H 0.14 1.00 8.06 -52.49 -0.42 0.58 16 32 H 0.14 1.49 8.06 -52.49 -0.42 1.07 16 33 H 0.05 0.58 6.95 -51.93 -0.36 0.22 16 34 H 0.08 1.11 8.07 -51.93 -0.42 0.69 16 35 H 0.06 0.62 6.01 -51.93 -0.31 0.30 16 36 H 0.04 0.87 8.07 -51.93 -0.42 0.45 16 37 H 0.04 1.25 7.42 -51.93 -0.39 0.86 16 38 H 0.26 7.20 8.31 -40.82 -0.34 6.86 16 LS Contribution 337.44 15.07 5.09 5.09 Total: -1.00 -31.59 337.44 -7.65 -39.23 By element: Atomic # 1 Polarization: 6.03 SS G_CDS: -4.28 Total: 1.75 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -2.01 Total: 0.03 kcal Atomic # 7 Polarization: -46.29 SS G_CDS: -0.06 Total: -46.35 kcal Atomic # 8 Polarization: -12.37 SS G_CDS: 0.09 Total: -12.28 kcal Atomic # 9 Polarization: -1.62 SS G_CDS: 0.04 Total: -1.58 kcal Atomic # 14 Polarization: 21.35 SS G_CDS: -5.02 Total: 16.33 kcal Atomic # 17 Polarization: -0.72 SS G_CDS: -1.48 Total: -2.20 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -31.59 -7.65 -39.23 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000112530572.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.572 kcal (2) G-P(sol) polarization free energy of solvation -31.586 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.158 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.647 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.233 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.805 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds