Wall clock time and date at job start Tue Mar 31 2020 10:40:57
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= -1
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* DEV - DEVELOPER OPTIONS ARE ALLOWED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS USER-SPECIFIED
* DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06
* IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345
* ALPHA - THE SOLVENT ALPHA IS 0.00
* BETA - THE SOLVENT BETA IS 0.00
* GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS
* 38.93 CAL MOL^-1 ANGSTROM^-2
* FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00
* FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 N 1.46493 * 1
3 3 C 1.46505 * 119.99899 * 2 1
4 4 C 1.50703 * 109.47064 * 270.00279 * 3 2 1
5 5 C 1.38459 * 120.01976 * 89.99990 * 4 3 2
6 6 F 1.35096 * 120.01818 * 359.97438 * 5 4 3
7 7 C 1.38443 * 119.96169 * 179.97438 * 5 4 3
8 8 C 1.38231 * 120.00353 * 359.97438 * 7 5 4
9 9 C 1.38206 * 120.03621 * 359.97438 * 8 7 5
10 10 C 1.38291 * 120.01607 * 269.72116 * 4 3 2
11 11 Cl 1.73602 * 120.00435 * 0.02562 * 10 4 3
12 12 C 1.34773 * 120.00646 * 180.02562 * 2 1 3
13 13 O 1.21585 * 120.00914 * 179.97438 * 12 2 1
14 14 N 1.34781 * 119.99568 * 359.97438 * 12 2 1
15 15 C 1.46500 * 120.00006 * 180.02562 * 14 12 2
16 16 C 1.53000 * 109.47327 * 179.97438 * 15 14 12
17 17 C 1.50693 * 109.47316 * 179.97438 * 16 15 14
18 18 H 1.07996 * 120.00422 * 359.97438 * 17 16 15
19 19 C 1.37881 * 120.00084 * 180.02562 * 17 16 15
20 20 N 1.31515 * 119.99759 * 359.97438 * 19 17 16
21 21 Si 1.86799 * 120.00029 * 180.02562 * 19 17 16
22 22 H 1.48500 * 109.47592 * 89.99549 * 21 19 17
23 23 H 1.48505 * 109.46817 * 209.99469 * 21 19 17
24 24 H 1.48504 * 109.47006 * 329.98950 * 21 19 17
25 25 H 1.08994 * 109.47405 * 90.00269 * 1 2 3
26 26 H 1.09006 * 109.46911 * 209.99921 * 1 2 3
27 27 H 1.08996 * 109.47170 * 329.99434 * 1 2 3
28 28 H 1.09002 * 109.47068 * 30.00248 * 3 2 1
29 29 H 1.09001 * 109.47372 * 150.00336 * 3 2 1
30 30 H 1.08003 * 120.00056 * 179.97438 * 7 5 4
31 31 H 1.07991 * 119.98233 * 180.02562 * 8 7 5
32 32 H 1.08000 * 119.98254 * 180.02562 * 9 8 7
33 33 H 0.97002 * 119.99826 * 359.97438 * 14 12 2
34 34 H 1.09003 * 109.47193 * 299.99874 * 15 14 12
35 35 H 1.09001 * 109.47647 * 59.99787 * 15 14 12
36 36 H 1.09003 * 109.47100 * 300.00199 * 16 15 14
37 37 H 1.09001 * 109.46712 * 59.99482 * 16 15 14
38 38 H 0.97001 * 119.99830 * 180.02562 * 20 19 17
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 7 1.4649 0.0000 0.0000
3 6 2.1974 1.2688 0.0000
4 6 2.4485 1.7038 -1.4208
5 6 1.5257 2.5032 -2.0739
6 9 0.3994 2.8932 -1.4379
7 6 1.7578 2.9026 -3.3790
8 6 2.9106 2.5039 -4.0292
9 6 3.8323 1.7068 -3.3770
10 6 3.6036 1.3096 -2.0712
11 17 4.7644 0.3128 -1.2512
12 6 2.1389 -1.1671 -0.0005
13 8 3.3548 -1.1671 -0.0010
14 7 1.4651 -2.3344 -0.0005
15 6 2.1976 -3.6030 -0.0005
16 6 1.2035 -4.7660 0.0001
17 6 1.9570 -6.0711 -0.0005
18 1 3.0369 -6.0711 -0.0017
19 6 1.2676 -7.2652 -0.0006
20 7 -0.0475 -7.2652 0.0003
21 14 2.2017 -8.8829 -0.0007
22 1 2.4493 -9.3117 1.3993
23 1 1.3991 -9.9178 -0.7008
24 1 3.4992 -8.7052 -0.7009
25 1 -0.3634 0.0000 -1.0276
26 1 -0.3633 -0.8900 0.5139
27 1 -0.3633 0.8899 0.5139
28 1 1.6083 2.0284 0.5139
29 1 3.1499 1.1385 0.5138
30 1 1.0382 3.5259 -3.8891
31 1 3.0915 2.8160 -5.0471
32 1 4.7329 1.3961 -3.8858
33 1 0.4950 -2.3344 0.0002
34 1 2.8243 -3.6608 -0.8905
35 1 2.8243 -3.6608 0.8894
36 1 0.5771 -4.7081 0.8903
37 1 0.5764 -4.7084 -0.8896
38 1 -0.5325 -8.1053 0.0006
RHF calculation, no. of doubly occupied orbitals= 55
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93
& DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV
ZINC000273113892.mol2 38
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Tue Mar 31 2020 10:40:57
Heat of formation + Delta-G solvation = -43.178022 kcal
Electronic energy + Delta-G solvation = -23712.182929 eV
Core-core repulsion = 19916.694760 eV
Total energy + Delta-G solvation = -3795.488168 eV
No. of doubly occupied orbitals = 55
Molecular weight
(most abundant/longest-lived isotopes) = 314.094 amu
Computer time = 0.43 seconds
Orbital eigenvalues (eV)
-49.20297 -40.02422 -39.04875 -36.24445 -35.64215 -34.68741 -32.92688 -31.91555
-30.61216 -29.42448 -27.38014 -25.96202 -24.30281 -23.00773 -22.12785 -20.92064
-19.62129 -18.07768 -17.68945 -16.76483 -16.52065 -16.40457 -16.12630 -15.56395
-15.28465 -14.76936 -14.49544 -14.01171 -13.95541 -13.87140 -13.47497 -13.27031
-13.12037 -12.69200 -12.53039 -12.32881 -12.24653 -11.68721 -11.59032 -11.27153
-11.10910 -11.01297 -10.73867 -10.59909 -10.24423 -9.62766 -9.41453 -9.22974
-9.10226 -8.88239 -8.51841 -8.44067 -8.14369 -6.06753 -4.09084 0.75038
0.78882 2.19239 2.89707 3.31173 3.32830 3.37329 3.42063 3.65333
3.95973 4.33167 4.39997 4.45522 4.57172 4.60776 4.92923 5.11024
5.16885 5.21524 5.30389 5.43234 5.57381 5.62440 5.68714 5.78059
5.90203 5.93754 6.30961 6.45290 6.45811 6.58215 6.82674 7.09723
7.20658 7.59797 7.67322 7.92855 8.29088 8.44918 8.96229 9.08991
9.55465 11.04985
Molecular weight = 314.09amu
Principal moments of inertia in cm(-1)
A = 0.019896 B = 0.003182 C = 0.002992
Principal moments of inertia in units of 10**(-40)*gram-cm**2
A = 1406.982097 B = 8797.934521 C = 9356.979692
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C 0.082 3.918
2 N -0.633 5.633
3 C 0.173 3.827
4 C -0.137 4.137
5 C 0.122 3.878
6 F -0.133 7.133
7 C -0.160 4.160
8 C -0.078 4.078
9 C -0.130 4.130
10 C 0.003 3.997
11 Cl -0.002 7.002
12 C 0.693 3.307
13 O -0.574 6.574
14 N -0.739 5.739
15 C 0.142 3.858
16 C 0.013 3.987
17 C -0.519 4.519
18 H 0.059 0.941
19 C 0.058 3.942
20 N -0.895 5.895
21 Si 0.896 3.104
22 H -0.280 1.280
23 H -0.286 1.286
24 H -0.272 1.272
25 H 0.050 0.950
26 H 0.071 0.929
27 H 0.071 0.929
28 H 0.086 0.914
29 H 0.104 0.896
30 H 0.139 0.861
31 H 0.139 0.861
32 H 0.138 0.862
33 H 0.391 0.609
34 H 0.052 0.948
35 H 0.053 0.947
36 H 0.021 0.979
37 H 0.021 0.979
38 H 0.261 0.739
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges 2.111 23.735 -5.399 24.433
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.062 4.062
2 N -0.371 5.371
3 C 0.049 3.951
4 C -0.140 4.140
5 C 0.102 3.898
6 F -0.111 7.111
7 C -0.179 4.179
8 C -0.096 4.096
9 C -0.149 4.149
10 C -0.025 4.025
11 Cl 0.027 6.973
12 C 0.395 3.605
13 O -0.451 6.451
14 N -0.394 5.394
15 C 0.019 3.981
16 C -0.024 4.024
17 C -0.558 4.558
18 H 0.077 0.923
19 C -0.143 4.143
20 N -0.534 5.534
21 Si 0.724 3.276
22 H -0.206 1.206
23 H -0.212 1.212
24 H -0.197 1.197
25 H 0.068 0.932
26 H 0.090 0.910
27 H 0.089 0.911
28 H 0.104 0.896
29 H 0.122 0.878
30 H 0.156 0.844
31 H 0.157 0.843
32 H 0.156 0.844
33 H 0.226 0.774
34 H 0.071 0.929
35 H 0.071 0.929
36 H 0.039 0.961
37 H 0.039 0.961
38 H 0.071 0.929
Dipole moment (debyes) X Y Z Total
from point charges 2.930 23.469 -5.266 24.230
hybrid contribution -0.426 -0.915 -0.016 1.009
sum 2.504 22.554 -5.282 23.299
Atomic orbital electron populations
1.21710 0.79970 1.02967 1.01563 1.46990 1.06015 1.04415 1.79714
1.20078 0.99481 0.84955 0.90617 1.20234 0.94079 1.00177 0.99551
1.17345 0.83508 0.97756 0.91223 1.91497 1.48604 1.89144 1.81869
1.21173 0.99817 1.03475 0.93476 1.20963 0.92576 0.96126 0.99977
1.21205 1.01108 0.99397 0.93160 1.20922 0.92622 0.95385 0.93575
1.98503 1.56646 1.64959 1.77147 1.16077 0.85779 0.80310 0.78375
1.90987 1.10929 1.85908 1.57255 1.45688 1.09852 1.05291 1.78546
1.21540 0.95549 0.80479 1.00492 1.19315 0.94284 0.91163 0.97680
1.21053 0.93246 0.90380 1.51114 0.92258 1.24994 0.94881 0.99371
0.95056 1.69959 1.06086 1.26798 1.50545 0.86521 0.79857 0.83051
0.78179 1.20580 1.21200 1.19723 0.93157 0.91009 0.91067 0.89565
0.87798 0.84361 0.84290 0.84394 0.77442 0.92915 0.92896 0.96082
0.96100 0.92900
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 13.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C 0.08 0.89 10.25 59.84 0.61 1.51 16
2 N -0.63 -8.81 2.86 -188.74 -0.54 -9.35 16
3 C 0.17 2.13 5.22 -5.19 -0.03 2.11 16
4 C -0.14 -1.66 5.47 -104.52 -0.57 -2.24 16
5 C 0.12 1.31 7.24 -39.42 -0.29 1.02 16
6 F -0.13 -1.40 16.48 2.25 0.04 -1.36 16
7 C -0.16 -1.42 10.03 -39.51 -0.40 -1.81 16
8 C -0.08 -0.64 10.04 -39.60 -0.40 -1.04 16
9 C -0.13 -1.31 9.83 -39.54 -0.39 -1.70 16
10 C 0.00 0.04 6.31 -39.50 -0.25 -0.21 16
11 Cl 0.00 -0.04 23.22 -51.86 -1.20 -1.24 16
12 C 0.69 12.26 8.28 -86.92 -0.72 11.54 16
13 O -0.57 -11.40 11.61 5.29 0.06 -11.34 16
14 N -0.74 -13.54 5.42 -65.22 -0.35 -13.90 16
15 C 0.14 3.11 5.61 -4.04 -0.02 3.08 16
16 C 0.01 0.33 5.09 -27.89 -0.14 0.19 16
17 C -0.52 -14.57 9.11 -34.44 -0.31 -14.89 16
18 H 0.06 1.63 7.74 -52.49 -0.41 1.23 16
19 C 0.06 1.66 5.46 -17.82 -0.10 1.56 16
20 N -0.89 -26.35 13.29 55.43 0.74 -25.62 16
21 Si 0.90 21.57 29.54 -169.99 -5.02 16.55 16
22 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16
23 H -0.29 -6.80 7.11 56.52 0.40 -6.40 16
24 H -0.27 -6.46 7.11 56.52 0.40 -6.05 16
25 H 0.05 0.55 8.14 -51.93 -0.42 0.12 16
26 H 0.07 0.77 6.36 -51.93 -0.33 0.44 16
27 H 0.07 0.63 7.89 -51.93 -0.41 0.22 16
28 H 0.09 0.87 7.39 -51.93 -0.38 0.48 16
29 H 0.10 1.41 6.29 -51.93 -0.33 1.08 16
30 H 0.14 0.90 8.06 -52.48 -0.42 0.48 16
31 H 0.14 0.73 8.06 -52.49 -0.42 0.30 16
32 H 0.14 1.17 8.06 -52.49 -0.42 0.75 16
33 H 0.39 6.41 6.20 -40.82 -0.25 6.15 16
34 H 0.05 1.20 8.14 -51.93 -0.42 0.78 16
35 H 0.05 1.20 8.14 -51.93 -0.42 0.78 16
36 H 0.02 0.55 8.14 -51.93 -0.42 0.13 16
37 H 0.02 0.55 8.14 -51.93 -0.42 0.13 16
38 H 0.26 7.27 8.31 -40.82 -0.34 6.93 16
LS Contribution 336.74 15.07 5.07 5.07
Total: -1.00 -31.93 336.74 -8.83 -40.76
By element:
Atomic # 1 Polarization: 5.93 SS G_CDS: -4.63 Total: 1.30 kcal
Atomic # 6 Polarization: 2.11 SS G_CDS: -3.00 Total: -0.88 kcal
Atomic # 7 Polarization: -48.70 SS G_CDS: -0.16 Total: -48.86 kcal
Atomic # 8 Polarization: -11.40 SS G_CDS: 0.06 Total: -11.34 kcal
Atomic # 9 Polarization: -1.40 SS G_CDS: 0.04 Total: -1.36 kcal
Atomic # 14 Polarization: 21.57 SS G_CDS: -5.02 Total: 16.55 kcal
Atomic # 17 Polarization: -0.04 SS G_CDS: -1.20 Total: -1.24 kcal
Total LS contribution 5.07 Total: 5.07 kcal
Total: -31.93 -8.83 -40.76 kcal
The number of atoms in the molecule is 38
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
ZINC000273113892.mol2 38
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -2.417 kcal
(2) G-P(sol) polarization free energy of solvation -31.927 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.344 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.834 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.761 kcal
(6) G-S(sol) free energy of system = (1) + (5) -43.178 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 0.43 seconds