Wall clock time and date at job start Tue Mar 31 2020 10:41:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46898 * 1 3 3 C 1.46906 * 111.00071 * 2 1 4 4 C 1.46898 * 111.00178 * 123.95828 * 2 1 3 5 5 H 1.08997 * 109.47139 * 302.16737 * 4 2 1 6 6 C 1.50703 * 109.47233 * 62.16770 * 4 2 1 7 7 O 1.21289 * 120.00009 * 26.77858 * 6 4 2 8 8 N 1.34776 * 119.99882 * 206.78175 * 6 4 2 9 9 C 1.46502 * 119.99825 * 4.81133 * 8 6 4 10 10 C 1.37092 * 119.99798 * 184.52830 * 8 6 4 11 11 H 1.08005 * 120.00184 * 6.83834 * 10 8 6 12 12 C 1.38949 * 120.00231 * 186.83862 * 10 8 6 13 13 N 1.31420 * 119.99682 * 354.42184 * 12 10 8 14 14 Si 1.86803 * 120.00576 * 174.42283 * 12 10 8 15 15 H 1.48504 * 109.46933 * 59.99762 * 14 12 10 16 16 H 1.48499 * 109.47359 * 179.97438 * 14 12 10 17 17 H 1.48503 * 109.46670 * 299.99925 * 14 12 10 18 18 C 1.50704 * 109.47041 * 182.16460 * 4 2 1 19 19 C 1.38462 * 120.01535 * 132.13610 * 18 4 2 20 20 F 1.35094 * 120.02047 * 359.97438 * 19 18 4 21 21 C 1.38444 * 119.95839 * 179.74489 * 19 18 4 22 22 C 1.38227 * 120.00087 * 0.52795 * 21 19 18 23 23 C 1.38206 * 120.03844 * 359.72496 * 22 21 19 24 24 C 1.38295 * 120.02044 * 312.41099 * 18 4 2 25 25 Cl 1.73600 * 119.99964 * 359.97438 * 24 18 4 26 26 H 1.08999 * 109.47364 * 299.99481 * 1 2 3 27 27 H 1.09002 * 109.47577 * 59.99441 * 1 2 3 28 28 H 1.09000 * 109.47020 * 179.97438 * 1 2 3 29 29 H 1.08995 * 109.47290 * 185.55501 * 3 2 1 30 30 H 1.08996 * 109.46973 * 305.55887 * 3 2 1 31 31 H 1.08999 * 109.46550 * 65.55758 * 3 2 1 32 32 H 1.09009 * 109.46425 * 236.19395 * 9 8 6 33 33 H 1.08996 * 109.47385 * 356.19250 * 9 8 6 34 34 H 1.09001 * 109.47133 * 116.20192 * 9 8 6 35 35 H 0.96999 * 119.99841 * 180.02562 * 13 12 10 36 36 H 1.08000 * 120.00147 * 180.25293 * 21 19 18 37 37 H 1.08000 * 119.98194 * 179.70340 * 22 21 19 38 38 H 1.08004 * 119.97908 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3715 0.0000 4 6 1.9955 -0.7660 1.1375 5 1 1.6149 -0.3435 2.0674 6 6 1.5562 -2.2030 1.0219 7 8 1.3170 -2.6782 -0.0681 8 7 1.4291 -2.9600 2.1297 9 6 1.6151 -2.3591 3.4527 10 6 1.1201 -4.2910 2.0185 11 1 1.0871 -4.7584 1.0454 12 6 0.8492 -5.0389 3.1579 13 7 0.9958 -4.5002 4.3476 14 14 0.2768 -6.8099 2.9986 15 1 1.3115 -7.6024 2.2868 16 1 0.0584 -7.3831 4.3510 17 1 -0.9939 -6.8522 2.2313 18 6 3.5010 -0.6992 1.1344 19 6 4.1833 -0.3959 2.3004 20 9 3.4998 -0.1591 3.4413 21 6 5.5666 -0.3400 2.2974 22 6 6.2653 -0.5763 1.1284 23 6 5.5841 -0.8739 -0.0367 24 6 4.2017 -0.9353 -0.0344 25 17 3.3469 -1.3094 -1.4983 26 1 -0.3634 0.5137 0.8900 27 1 -0.3634 0.5139 -0.8899 28 1 -0.3633 -1.0277 -0.0005 29 1 3.0805 1.3441 -0.0995 30 1 1.5677 1.9248 -0.8360 31 1 1.7286 1.8630 0.9356 32 1 2.3897 -2.9033 3.9932 33 1 1.9145 -1.3172 3.3398 34 1 0.6795 -2.4100 4.0097 35 1 0.8072 -5.0224 5.1430 36 1 6.0996 -0.1074 3.2075 37 1 7.3442 -0.5279 1.1253 38 1 6.1310 -1.0580 -0.9496 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000360098193.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:41:41 Heat of formation + Delta-G solvation = -9.880366 kcal Electronic energy + Delta-G solvation = -25652.920412 eV Core-core repulsion = 21858.876138 eV Total energy + Delta-G solvation = -3794.044273 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 314.094 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -48.84988 -39.75910 -38.16608 -36.30460 -35.72097 -34.45434 -31.96264 -31.18486 -30.24313 -27.74868 -26.93731 -26.03810 -24.20126 -22.93656 -22.33452 -21.35615 -18.70190 -17.58802 -17.05809 -16.83441 -16.12452 -15.73247 -15.47608 -14.84761 -14.61582 -14.51900 -14.30991 -13.97848 -13.53148 -13.39587 -13.28068 -12.86953 -12.63447 -12.11353 -11.95425 -11.76891 -11.68209 -11.53338 -11.36789 -11.10130 -10.92674 -10.91539 -10.74560 -10.57390 -10.38149 -10.10112 -10.01185 -8.98465 -8.93638 -8.48336 -8.06050 -7.76067 -7.70059 -6.17147 -3.73769 1.15748 1.17106 2.64642 3.20710 3.26273 3.30641 3.51571 3.91512 4.00590 4.26431 4.39273 4.76685 4.92193 5.01572 5.08479 5.24700 5.28396 5.46290 5.56242 5.61065 5.69151 5.80042 5.90563 5.96569 6.00540 6.06028 6.10931 6.25052 6.30344 6.47209 6.51581 6.81802 7.16818 7.27762 7.41568 7.48429 7.61068 8.13424 8.56245 9.26292 9.51222 10.07415 10.76021 Molecular weight = 314.09amu Principal moments of inertia in cm(-1) A = 0.014511 B = 0.006058 C = 0.005533 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1929.061568 B = 4621.068605 C = 5059.729810 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 N -0.507 5.507 3 C 0.025 3.975 4 C 0.112 3.888 5 H 0.065 0.935 6 C 0.449 3.551 7 O -0.556 6.556 8 N -0.447 5.447 9 C 0.105 3.895 10 C -0.294 4.294 11 H 0.103 0.897 12 C 0.025 3.975 13 N -0.888 5.888 14 Si 0.930 3.070 15 H -0.274 1.274 16 H -0.284 1.284 17 H -0.274 1.274 18 C -0.098 4.098 19 C 0.117 3.883 20 F -0.126 7.126 21 C -0.159 4.159 22 C -0.083 4.083 23 C -0.135 4.135 24 C 0.017 3.983 25 Cl -0.006 7.006 26 H 0.017 0.983 27 H 0.065 0.935 28 H 0.082 0.918 29 H 0.063 0.937 30 H 0.068 0.932 31 H 0.019 0.981 32 H 0.068 0.932 33 H 0.032 0.968 34 H 0.065 0.935 35 H 0.265 0.735 36 H 0.138 0.862 37 H 0.137 0.863 38 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.004 11.439 -3.658 14.433 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 N -0.231 5.231 3 C -0.124 4.124 4 C 0.000 4.000 5 H 0.083 0.917 6 C 0.235 3.765 7 O -0.438 6.438 8 N -0.167 5.167 9 C -0.039 4.039 10 C -0.422 4.422 11 H 0.121 0.879 12 C -0.176 4.176 13 N -0.530 5.530 14 Si 0.756 3.244 15 H -0.199 1.199 16 H -0.210 1.210 17 H -0.199 1.199 18 C -0.100 4.100 19 C 0.097 3.903 20 F -0.105 7.105 21 C -0.178 4.178 22 C -0.102 4.102 23 C -0.154 4.154 24 C -0.011 4.011 25 Cl 0.023 6.977 26 H 0.035 0.965 27 H 0.084 0.916 28 H 0.101 0.899 29 H 0.082 0.918 30 H 0.087 0.913 31 H 0.038 0.962 32 H 0.087 0.913 33 H 0.050 0.950 34 H 0.083 0.917 35 H 0.075 0.925 36 H 0.156 0.844 37 H 0.155 0.845 38 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 7.877 10.848 -4.507 14.144 hybrid contribution -0.656 -0.433 1.264 1.489 sum 7.221 10.415 -3.243 13.081 Atomic orbital electron populations 1.22373 0.86617 1.03497 0.99428 1.61834 1.08168 1.11792 1.41287 1.22410 1.00792 0.89216 0.99954 1.20464 0.89482 0.96535 0.93517 0.91735 1.19198 0.85995 0.86037 0.85242 1.90532 1.54445 1.72649 1.26207 1.43702 1.59623 1.08709 1.04652 1.22036 1.03334 0.93693 0.84817 1.19727 1.43630 0.83777 0.95080 0.87882 1.25309 0.97168 1.00385 0.94746 1.70189 1.48397 1.36850 0.97529 0.85944 0.79471 0.81792 0.77154 1.19945 1.20984 1.19910 1.19474 0.95760 1.02967 0.91841 1.17377 0.89919 1.01320 0.81707 1.91463 1.79541 1.91626 1.47825 1.21095 0.91814 1.04656 1.00188 1.20879 1.00058 0.97945 0.91298 1.21135 0.92101 1.02594 0.99576 1.20651 0.91972 0.98672 0.89765 1.98440 1.76503 1.91475 1.31249 0.96474 0.91602 0.89890 0.91831 0.91299 0.96207 0.91314 0.95016 0.91688 0.92460 0.84390 0.84499 0.84602 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.49 9.29 60.06 0.56 1.05 16 2 N -0.51 -9.03 2.38 -246.00 -0.58 -9.62 16 3 C 0.02 0.35 8.98 60.07 0.54 0.89 16 4 C 0.11 2.22 1.17 -70.01 -0.08 2.14 16 5 H 0.07 1.30 5.47 -51.93 -0.28 1.01 16 6 C 0.45 11.00 5.47 -10.98 -0.06 10.94 16 7 O -0.56 -14.87 13.32 5.55 0.07 -14.80 16 8 N -0.45 -11.77 3.03 -122.19 -0.37 -12.14 16 9 C 0.10 2.52 8.69 59.85 0.52 3.04 16 10 C -0.29 -8.32 9.54 -14.94 -0.14 -8.46 16 11 H 0.10 3.03 7.21 -52.48 -0.38 2.65 16 12 C 0.03 0.68 5.46 -17.46 -0.10 0.58 16 13 N -0.89 -23.88 9.45 55.50 0.52 -23.35 16 14 Si 0.93 21.24 29.56 -169.99 -5.02 16.22 16 15 H -0.27 -6.23 7.11 56.52 0.40 -5.83 16 16 H -0.28 -6.34 7.11 56.52 0.40 -5.94 16 17 H -0.27 -6.26 7.11 56.52 0.40 -5.85 16 18 C -0.10 -1.77 3.55 -104.52 -0.37 -2.14 16 19 C 0.12 1.92 7.15 -39.42 -0.28 1.64 16 20 F -0.13 -2.16 13.96 2.25 0.03 -2.13 16 21 C -0.16 -2.08 10.03 -39.51 -0.40 -2.48 16 22 C -0.08 -0.97 10.04 -39.60 -0.40 -1.37 16 23 C -0.14 -1.82 9.83 -39.54 -0.39 -2.21 16 24 C 0.02 0.29 5.21 -39.51 -0.21 0.08 16 25 Cl -0.01 -0.12 24.09 -51.86 -1.25 -1.37 16 26 H 0.02 0.27 8.14 -51.93 -0.42 -0.15 16 27 H 0.07 0.96 8.14 -51.93 -0.42 0.54 16 28 H 0.08 1.68 6.44 -51.93 -0.33 1.35 16 29 H 0.06 0.90 6.33 -51.93 -0.33 0.58 16 30 H 0.07 0.86 8.13 -51.93 -0.42 0.43 16 31 H 0.02 0.27 8.14 -51.93 -0.42 -0.15 16 32 H 0.07 1.76 7.07 -51.92 -0.37 1.40 16 33 H 0.03 0.68 2.55 -51.93 -0.13 0.54 16 34 H 0.06 1.65 7.03 -51.93 -0.37 1.28 16 35 H 0.26 6.78 8.31 -40.82 -0.34 6.44 16 36 H 0.14 1.45 8.06 -52.49 -0.42 1.03 16 37 H 0.14 1.10 8.06 -52.49 -0.42 0.68 16 38 H 0.14 1.50 8.06 -52.48 -0.42 1.08 16 LS Contribution 318.65 15.07 4.80 4.80 Total: -1.00 -30.69 318.65 -6.88 -37.58 By element: Atomic # 1 Polarization: 5.37 SS G_CDS: -4.28 Total: 1.09 kcal Atomic # 6 Polarization: 4.52 SS G_CDS: -0.80 Total: 3.72 kcal Atomic # 7 Polarization: -44.68 SS G_CDS: -0.43 Total: -45.11 kcal Atomic # 8 Polarization: -14.87 SS G_CDS: 0.07 Total: -14.80 kcal Atomic # 9 Polarization: -2.16 SS G_CDS: 0.03 Total: -2.13 kcal Atomic # 14 Polarization: 21.24 SS G_CDS: -5.02 Total: 16.22 kcal Atomic # 17 Polarization: -0.12 SS G_CDS: -1.25 Total: -1.37 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -30.69 -6.88 -37.58 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000360098193.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.696 kcal (2) G-P(sol) polarization free energy of solvation -30.693 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.997 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.883 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.576 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.880 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds