Wall clock time and date at job start Tue Mar 31 2020 10:29:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 H 1.09008 * 109.46897 * 2 1 4 4 F 1.39903 * 109.47236 * 119.99343 * 2 1 3 5 5 C 1.52991 * 109.47250 * 239.99702 * 2 1 3 6 6 C 1.53008 * 109.47126 * 174.99666 * 5 2 1 7 7 N 1.46500 * 109.46857 * 180.02562 * 6 5 2 8 8 C 1.34780 * 119.99499 * 180.02562 * 7 6 5 9 9 O 1.21579 * 120.00232 * 0.02562 * 8 7 6 10 10 N 1.34777 * 119.99828 * 179.97438 * 8 7 6 11 11 C 1.39278 * 119.99963 * 175.75133 * 10 8 7 12 12 C 1.39463 * 119.83863 * 34.73970 * 11 10 8 13 13 C 1.36369 * 120.17764 * 179.71845 * 12 11 10 14 14 C 1.40891 * 119.85175 * 0.55168 * 13 12 11 15 15 C 1.41147 * 120.15926 * 179.74404 * 14 13 12 16 16 H 1.07996 * 120.00429 * 34.75431 * 15 14 13 17 17 C 1.39899 * 119.99947 * 214.75156 * 15 14 13 18 18 N 1.30874 * 119.99587 * 355.59256 * 17 15 14 19 19 Si 1.86798 * 119.99940 * 175.59459 * 17 15 14 20 20 H 1.48500 * 109.47406 * 359.97438 * 19 17 15 21 21 H 1.48497 * 109.46964 * 120.00130 * 19 17 15 22 22 H 1.48502 * 109.46761 * 240.00149 * 19 17 15 23 23 C 1.40848 * 119.67907 * 359.72092 * 14 13 12 24 24 C 1.36473 * 119.81764 * 0.02562 * 23 14 13 25 25 Cl 1.73600 * 119.92239 * 179.97438 * 24 23 14 26 26 H 1.09003 * 109.46953 * 300.00197 * 1 2 3 27 27 H 1.08998 * 109.46756 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.46955 * 60.00076 * 1 2 3 29 29 H 1.08995 * 109.47636 * 295.00268 * 5 2 1 30 30 H 1.09005 * 109.47216 * 55.00423 * 5 2 1 31 31 H 1.09000 * 109.47069 * 300.00089 * 6 5 2 32 32 H 1.08999 * 109.46763 * 60.00575 * 6 5 2 33 33 H 0.96994 * 120.00656 * 0.02562 * 7 6 5 34 34 H 0.97005 * 120.00110 * 355.75572 * 10 8 7 35 35 H 1.08002 * 119.90983 * 359.97438 * 12 11 10 36 36 H 1.08009 * 120.07720 * 180.27486 * 13 12 11 37 37 H 0.97004 * 119.99768 * 180.02562 * 18 17 15 38 38 H 1.08003 * 120.08721 * 180.02562 * 23 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 9 1.9964 -0.6594 1.1424 5 6 2.0400 -0.7213 -1.2491 6 6 3.5649 -0.6132 -1.3136 7 7 4.0532 -1.3034 -2.5100 8 6 5.3741 -1.3394 -2.7752 9 8 6.1605 -0.7996 -2.0213 10 7 5.8234 -1.9748 -3.8757 11 6 7.1780 -1.9370 -4.1973 12 6 8.1327 -1.9324 -3.1807 13 6 9.4610 -1.9013 -3.4878 14 6 9.8684 -1.8621 -4.8360 15 6 11.2414 -1.8243 -5.1611 16 1 11.9559 -2.3556 -4.5499 17 6 11.6766 -1.0988 -6.2752 18 7 10.8040 -0.5267 -7.0652 19 14 13.5033 -0.9467 -6.6353 20 1 14.2748 -1.6785 -5.5987 21 1 13.7944 -1.5264 -7.9711 22 1 13.8927 0.4863 -6.6219 23 6 8.8989 -1.8612 -5.8577 24 6 7.5733 -1.8978 -5.5353 25 17 6.3760 -1.8962 -6.7924 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5138 -0.8900 29 1 1.7517 -1.7715 -1.2055 30 1 1.6055 -0.2617 -2.1369 31 1 3.8532 0.4371 -1.3573 32 1 3.9995 -1.0727 -0.4259 33 1 3.4259 -1.7344 -3.1114 34 1 5.2033 -2.4583 -4.4437 35 1 7.8193 -1.9576 -2.1474 36 1 10.1991 -1.9022 -2.6993 37 1 11.1058 -0.0239 -7.8379 38 1 9.2038 -1.8317 -6.8934 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000455725744.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:29:31 Heat of formation + Delta-G solvation = -80.442802 kcal Electronic energy + Delta-G solvation = -22830.599054 eV Core-core repulsion = 19033.494964 eV Total energy + Delta-G solvation = -3797.104090 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 314.094 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -47.89218 -39.96413 -37.76406 -35.88000 -35.49943 -34.37199 -33.42608 -32.81911 -29.67984 -29.38756 -28.51080 -25.21201 -23.63835 -21.80333 -21.67601 -20.95836 -20.14441 -18.07000 -17.39709 -17.07014 -16.80481 -15.74260 -15.42167 -15.38594 -15.14671 -14.54946 -14.27994 -14.06847 -14.00033 -13.32028 -13.12589 -12.93091 -12.67825 -12.51884 -12.32178 -12.16055 -11.68072 -11.64678 -11.40688 -11.21269 -11.09693 -11.07122 -10.93762 -10.57327 -10.30417 -10.03912 -9.73333 -9.57261 -9.29865 -9.01045 -8.90094 -7.52196 -6.96456 -6.69392 -4.43739 2.46733 2.86203 2.94192 3.06442 3.09442 3.13378 3.21892 3.65998 3.93445 4.17310 4.26627 4.37438 4.52764 4.59529 4.70226 4.90418 4.96954 5.17742 5.40081 5.46974 5.52153 5.60418 5.81512 5.86966 6.21776 6.51093 6.55094 6.69021 6.88726 7.00819 7.12348 7.26458 7.37734 7.71170 7.73249 7.95013 8.13609 8.38987 8.46508 8.77807 8.82636 9.02571 10.21179 Molecular weight = 314.09amu Principal moments of inertia in cm(-1) A = 0.025989 B = 0.002663 C = 0.002489 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1077.122884 B =10513.694347 C =11244.808459 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.092 3.908 3 H 0.087 0.913 4 F -0.212 7.212 5 C -0.159 4.159 6 C 0.139 3.861 7 N -0.752 5.752 8 C 0.697 3.303 9 O -0.577 6.577 10 N -0.665 5.665 11 C 0.033 3.967 12 C -0.076 4.076 13 C -0.200 4.200 14 C 0.106 3.894 15 C -0.456 4.456 16 H 0.081 0.919 17 C 0.068 3.932 18 N -0.806 5.806 19 Si 0.918 3.082 20 H -0.261 1.261 21 H -0.274 1.274 22 H -0.274 1.274 23 C -0.135 4.135 24 C -0.024 4.024 25 Cl -0.121 7.121 26 H 0.068 0.932 27 H 0.067 0.933 28 H 0.075 0.925 29 H 0.081 0.919 30 H 0.088 0.912 31 H 0.067 0.933 32 H 0.070 0.930 33 H 0.393 0.607 34 H 0.394 0.606 35 H 0.120 0.880 36 H 0.103 0.897 37 H 0.280 0.720 38 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.992 -0.437 5.643 17.909 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.055 3.945 3 H 0.105 0.895 4 F -0.193 7.193 5 C -0.198 4.198 6 C 0.014 3.986 7 N -0.409 5.409 8 C 0.398 3.602 9 O -0.454 6.454 10 N -0.312 5.312 11 C -0.062 4.062 12 C -0.096 4.096 13 C -0.220 4.220 14 C 0.103 3.897 15 C -0.486 4.486 16 H 0.099 0.901 17 C -0.148 4.148 18 N -0.432 5.432 19 Si 0.743 3.257 20 H -0.185 1.185 21 H -0.199 1.199 22 H -0.199 1.199 23 C -0.156 4.156 24 C -0.052 4.052 25 Cl -0.093 7.093 26 H 0.087 0.913 27 H 0.086 0.914 28 H 0.094 0.906 29 H 0.100 0.900 30 H 0.106 0.894 31 H 0.085 0.915 32 H 0.089 0.911 33 H 0.226 0.774 34 H 0.228 0.772 35 H 0.138 0.862 36 H 0.121 0.879 37 H 0.091 0.909 38 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -16.378 0.217 6.060 17.464 hybrid contribution -0.017 -0.174 -0.935 0.951 sum -16.395 0.043 5.125 17.177 Atomic orbital electron populations 1.22377 0.94090 1.03667 1.03580 1.21468 0.94808 0.96467 0.81758 0.89475 1.92843 1.90257 1.83327 1.52889 1.22436 0.96106 1.02742 0.98473 1.21092 0.92006 0.97696 0.87776 1.45041 1.06085 1.61479 1.28282 1.15949 0.82094 0.79711 0.82440 1.90907 1.54279 1.50801 1.49364 1.42031 1.08227 1.54172 1.26740 1.16703 0.81264 1.17232 0.90966 1.20429 0.92089 0.99600 0.97493 1.20909 0.94237 1.10590 0.96264 1.17612 0.93477 0.88676 0.89983 1.19521 0.92682 1.27327 1.09069 0.90099 1.25926 1.00303 0.93933 0.94594 1.69750 1.35536 1.25735 1.12194 0.86100 0.81857 0.78807 0.78984 1.18489 1.19915 1.19911 1.21187 0.88356 1.04173 1.01882 1.20407 0.89853 1.09568 0.85385 1.98244 1.59056 1.97550 1.54470 0.91286 0.91351 0.90573 0.89999 0.89388 0.91517 0.91147 0.77400 0.77162 0.86231 0.87886 0.90898 0.83839 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.94 9.65 37.16 0.36 -0.58 16 2 C 0.09 0.66 3.96 -26.73 -0.11 0.56 16 3 H 0.09 0.55 8.14 -51.92 -0.42 0.13 16 4 F -0.21 -2.23 16.76 2.25 0.04 -2.20 16 5 C -0.16 -1.14 5.10 -26.73 -0.14 -1.28 16 6 C 0.14 1.55 5.59 -4.04 -0.02 1.53 16 7 N -0.75 -9.49 5.56 -65.22 -0.36 -9.85 16 8 C 0.70 12.54 8.40 -86.92 -0.73 11.81 16 9 O -0.58 -12.80 13.72 5.30 0.07 -12.73 16 10 N -0.67 -12.04 5.02 -14.07 -0.07 -12.11 16 11 C 0.03 0.72 6.32 -83.52 -0.53 0.20 16 12 C -0.08 -1.78 8.61 -39.80 -0.34 -2.13 16 13 C -0.20 -4.90 9.74 -39.25 -0.38 -5.29 16 14 C 0.11 2.76 5.55 -106.80 -0.59 2.16 16 15 C -0.46 -11.78 9.02 -37.86 -0.34 -12.12 16 16 H 0.08 2.00 7.85 -52.49 -0.41 1.59 16 17 C 0.07 1.69 5.42 -17.34 -0.09 1.60 16 18 N -0.81 -20.60 10.59 55.55 0.59 -20.01 16 19 Si 0.92 18.62 29.56 -169.99 -5.03 13.60 16 20 H -0.26 -5.22 7.11 56.52 0.40 -4.82 16 21 H -0.27 -5.44 7.11 56.52 0.40 -5.04 16 22 H -0.27 -5.54 7.11 56.52 0.40 -5.14 16 23 C -0.14 -3.44 8.38 -39.23 -0.33 -3.76 16 24 C -0.02 -0.54 6.30 -39.72 -0.25 -0.79 16 25 Cl -0.12 -2.33 27.92 -51.86 -1.45 -3.78 16 26 H 0.07 0.35 8.14 -51.93 -0.42 -0.08 16 27 H 0.07 0.36 8.14 -51.93 -0.42 -0.07 16 28 H 0.08 0.29 8.14 -51.93 -0.42 -0.13 16 29 H 0.08 0.56 8.14 -51.93 -0.42 0.13 16 30 H 0.09 0.49 8.14 -51.93 -0.42 0.06 16 31 H 0.07 0.80 8.14 -51.93 -0.42 0.38 16 32 H 0.07 0.91 7.94 -51.93 -0.41 0.50 16 33 H 0.39 3.66 8.49 -40.82 -0.35 3.31 16 34 H 0.39 5.94 8.07 -40.82 -0.33 5.61 16 35 H 0.12 2.80 6.17 -52.49 -0.32 2.48 16 36 H 0.10 2.37 8.06 -52.48 -0.42 1.95 16 37 H 0.28 6.55 8.30 -40.82 -0.34 6.22 16 38 H 0.14 3.80 6.13 -52.48 -0.32 3.48 16 LS Contribution 340.49 15.07 5.13 5.13 Total: -1.00 -30.23 340.49 -9.23 -39.47 By element: Atomic # 1 Polarization: 15.23 SS G_CDS: -4.66 Total: 10.57 kcal Atomic # 6 Polarization: -4.60 SS G_CDS: -3.50 Total: -8.09 kcal Atomic # 7 Polarization: -42.12 SS G_CDS: 0.16 Total: -41.97 kcal Atomic # 8 Polarization: -12.80 SS G_CDS: 0.07 Total: -12.73 kcal Atomic # 9 Polarization: -2.23 SS G_CDS: 0.04 Total: -2.20 kcal Atomic # 14 Polarization: 18.62 SS G_CDS: -5.03 Total: 13.60 kcal Atomic # 17 Polarization: -2.33 SS G_CDS: -1.45 Total: -3.78 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -30.23 -9.23 -39.47 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000455725744.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.975 kcal (2) G-P(sol) polarization free energy of solvation -30.234 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.208 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.234 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.468 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.443 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds